mRNA_P-littoralis_Contig6.243.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig6.243.1
Unique NamemRNA_P-littoralis_Contig6.243.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: D7FIM9_ECTSI (YL1_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM9_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 4.290e-123
Identity = 254/357 (71.15%), Postives = 268/357 (75.07%), Query Frame = 1 
Query:   82 MSLAAERRRKAKALEDAGAALSVKLIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWSDRTPHTLTKRTMRASTKNKTEKSLEVREGEAKAREAQLKRSTPQLKKTLKGHFTQKQLLHEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILASRYVSRRGCVDTIFFPDAYYLPPVLCQ-PAAADSEDAPXXXXXXXXXXXXXXXXXGGGRRYDRRCKITGAPALYKDPLTGYSYANAAAFRQIRKRYGAAARRRLKDQR 1149
            MSLAAE+RRKAKALE+AGAALSVKL+ARSTRGQRISELQG+DAEADETFWGQGAWQEEE+GDSEFSSEE+EPDKFDKDFNDSES XXXXXXXXX                                     XXXXXXXXXXXXXX          P  L+KRT+RASTKNKTEKSLEVREGEAKAREAQLKRSTPQ KK +KG FTQKQLL EAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILASRY SRRGCVDTIFFPDAYYLPPVLCQ P +A   D                         DRRCKITGAPA Y+DPLTGY YAN AAFR++RKRYGA+ARRRLK QR
Sbjct:    1 MSLAAEKRRKAKALEEAGAALSVKLVARSTRGQRISELQGDDAEADETFWGQGAWQEEEDGDSEFSSEEDEPDKFDKDFNDSESEXXXXXXXXXNRLRKNERAAKRKQPGGVYKEPKTFAVKKRKTAPAGGXXXXXXXXXXXXXXA--------APGALSKRTVRASTKNKTEKSLEVREGEAKAREAQLKRSTPQRKKAIKGQFTQKQLLLEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILASRYASRRGCVDTIFFPDAYYLPPVLCQAPFSAGGGDGADQDKGSKTAKSSS----------DRRCKITGAPAPYRDPLTGYYYANGAAFREVRKRYGASARRRLKAQR 339
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BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A836CH45_9STRA (YL1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH45_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.090e-19
Identity = 160/381 (41.99%), Postives = 199/381 (52.23%), Query Frame = 1 
Query:  103 RRKAKALEDAGAALSVKLIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWS---------DRTPHTLTKRTMRASTKNKTEKSLEVREGEAKAREAQLKRSTPQLKKTLKG-HFTQKQLLHEAI-QTEQENMRWIL------------------------------KQRRLEDEAKEDEGRPKQHKILASRYVSRRGCVDTIFFPDAYYLPPVLCQPAAADSEDAPXXXXXXXXXXXXXXXXXGGGRRYDRRCKITGAPALYKDPLTGYSYANAAAFRQIRKRYGAA 1122
            +RK + LE+A AA S +LI             GEDA+AD+ FWGQ AW+E+E   SE+S+E EE D FD DFN+SE   XXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXG            D       +R+MR +TK KTE S +VRE     R+AQ K +  Q +   +    TQ+Q+L EA  +TE  N  W+                               +QR    EA++ E +P+QH    SR+ S+RG   T+ FP    +P VL  P       AP                    R     CK+TG PA Y+D LTGY +A+AAAFR++R+RYGAA
Sbjct:    5 KRKQRELEEATAAQSAELI-------------GEDADADQEFWGQDAWKEDE---SEYSTEAEEQDVFDSDFNESEESGXXXXXXXXXXXXXXXXXVEVYSEVRGQGSQNKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEDVGAGDVTAMDDLGGYAPERSMRTTTKTKTEVSAKVRE--QGLRQAQRKGAEQQPQAAARAFRLTQEQMLLEAASETEHANTNWVAXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAQQRXXXXEAQDLETQPRQHMPFISRFYSKRGAPCTVTFPAVDLVPSVLKGP-----HPAPITPQQ---------------RAQRTLCKVTGRPAKYRDSLTGYPFADAAAFRELRRRYGAA 347
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BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A4D9D960_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D960_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.820e-9
Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = 1 
Query:  565 RTMRASTKNKTEKSLEVREGEAKAREAQLKRSTPQLKKTLKGHFTQKQLLHEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILASRYVSRRGCVDTIFFPDAYYLPPVL 903
            R  RA+T+ KT   +  +E  A+  + + KR+T +  +  K  F+Q++LL EA QTEQEN RW+L +RRL++E       PK+   L +R+VSRRG    + FP+   +P +L
Sbjct:  228 RAKRATTQEKT---VATQEALARKGQEEAKRTTARAPRATKCIFSQEELLREACQTEQENARWLLGRRRLQNETDATSHAPKRQVKLKARFVSRRGGYRVVNFPEVDLMPGIL 337
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BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A7S3YB55_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB55_HETAK)

HSP 1 Score: 63.9 bits (154), Expect = 5.500e-9
Identity = 33/57 (57.89%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:  163 RSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSES 333
            R+T+G+R+  + GE+AEAD+ FWGQ AW +E+  D ++S+EEE+PD FDKDFND+ES
Sbjct:   35 RATQGKRMKAMIGEEAEADQEFWGQDAWNDED--DHDYSTEEEKPDLFDKDFNDTES 89
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A7R9YAX8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAX8_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 7.330e-9
Identity = 90/334 (26.95%), Postives = 135/334 (40.42%), Query Frame = 1 
Query:  127 DAGAALSVKLIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWSDRTPHTL--TKRTMRASTKNKTEKSLEVREGEAKAREAQLKRSTPQLKKTLKGHFTQKQLLHEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILASRYVSRR--GCVDTIFFPDAYYLPPVLCQPAAADSEDAPXXXXXXXXXXXXXXXXXGGGRRYDRRCKITGAPALYKDPLTGYSYANAAAFRQIRKRYG 1116
            D G  ++ +  +R+T G+R++ L GE  E D  F+G   WQE+ + DSE+S+E E+ DKFD DF+ SE                                                                  D     P     + R++R STK KT +S + ++ E K R    +R  P +K  L+   +Q++LL EA QTE+EN +W+  Q+R   E + ++   K+  +   R +SR+  G    I FP   + P +       D                             R C +TG PA Y DPLT   YA   AF++IR+R G
Sbjct:    1 DHGPTVAQQRESRATAGRRLTALVGEAKEEDAEFYGSSVWQEDAD-DSEYSTEPEQRDKFDSDFDASEDSSDDEAAADREREAKRQSRPKRKVPKTVVRPKVARPKPR-------------------------SDLKRAAPAAPVPSSRSLRHSTKTKTLESAQEQKKELK-RLRDARRRLP-VKAVLQ--LSQEELLLEACQTEEENYKWLQVQQRKAREREVNQQVIKKQVLFQERRLSRKQAGMDLIITFPMNEHFPKIFDSSIQDDERQR---------------------MAAPRACAVTGLPAKYLDPLTHQPYATLEAFKEIRRRAG 283
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: D0NCC4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCC4_PHYIT)

HSP 1 Score: 60.1 bits (144), Expect = 1.860e-6
Identity = 76/258 (29.46%), Postives = 110/258 (42.64%), Query Frame = 1 
Query:  154 LIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWSDRTPHTLTKR----TMRASTKNKTEKSLEVREGEA-KAREAQLKRSTPQLKKTLKGHFTQKQLLHEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILAS-RYVSRRGCVDTIFFPDAYYLPPVLCQ 909
            L ARS+RG RI +L GE+AEAD +FWGQ AWQEE E D ++S+E EE D  D DF+  E+                                                                G + +       KR    T+R+ST  K+ +S E+R   + +A +   K   P ++KT     TQ QL+ EA++TE EN + + +  +LE+E K +   PK     +  RY S+ G   TI F +    P +  Q
Sbjct:   22 LPARSSRGARIHKLIGEEAEADASFWGQAAWQEEGE-DDDYSTEAEEEDVVDSDFDADEAPDEEIHDAEEDEKPTKRKRSATSS----------------------------------------GRYKEPLQPRQAKRYVAPTVRSSTARKSSESSEMRRRASHEAAKLAAKSKKPIVEKT-GNRLTQAQLIAEAVRTEVENTQSLQRLEQLEEEKKAESVAPKAPFTGSMVRYYSKLGAPKTITFINTLNFPSIFNQ 237
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: H3GID9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GID9_PHYRM)

HSP 1 Score: 58.5 bits (140), Expect = 5.510e-6
Identity = 73/255 (28.63%), Postives = 106/255 (41.57%), Query Frame = 1 
Query:  154 LIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWSDRTPHTLTKRTMRASTKNKTEKSLEVREGEA-KAREAQLKRSTPQLKKTLKGHFTQKQLLHEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILAS-RYVSRRGCVDTIFFPDAYYLPPVLCQP 912
            L +RS+RG RI++L GE+AEAD +FWGQ AWQE+ E D ++S+E EE D  D DF+  E+                                                                              T+R+ST  K+ +S E+R   + +A +   K   P + KT     TQ QLL EA++TE EN + + +  +LE+E K +   PK     +  RY S+ G   TI F +    P +  QP
Sbjct:   23 LPSRSSRGTRITKLIGEEAEADASFWGQSAWQEDGE-DEDYSTEAEEEDVVDSDFDKEEAPDDEVHDAEEDEEPTRRKRSATSSGRYKEPVQPRPAKRKAVAPVQNSPVAAAAYALPVFEYVAP--------------TVRSSTARKSSESSEMRRRASHEAAKLAAKHKKPTVVKT-GNRLTQAQLLAEAVRTEVENTQSLQRLEQLEEEKKAESIAPKAPFTGSMVRYYSKLGAPKTITFLNTLDFPRIFNQP 261
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A7S3ZP53_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP53_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.070e-5
Identity = 47/139 (33.81%), Postives = 68/139 (48.92%), Query Frame = 1 
Query:  709 LLHEAIQTEQENMRWILKQRRLEDEAKEDEG---RPKQHKILASRYVSRRGCVDTIFFPDAYYLPPVLCQPAAADSEDAPXXXXXXXXXXXXXXXXXGGGRRYDRRCKITGAPALYKDPLTGYSYANAAAFRQIRKRYG 1116
            +L EA++TE+EN RW++KQ+R +  A +D G    PK   +   RY SR G V  + FP   ++P VL        +  P                       D++C ITG  A YK P TG  Y + AAF+++R+R G
Sbjct:  135 VLMEALETEEENRRWLIKQKR-DALANDDSGIVRPPKNFGMHPRRYSSREGNV--VNFPKTDHMPDVLY------GDQRPPQVP-------------------DKKCCITGKVARYKCPRTGLPYHDLAAFKELRRRNG 245
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A484E6I0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6I0_BRELC)

HSP 1 Score: 57.0 bits (136), Expect = 2.130e-5
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 1 
Query:  142 LSVKLIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFN 321
            LS +L  RS+RG RI +L GE+AEAD +FWGQ AWQE+ E D ++S+E EE D  D DF+
Sbjct:   19 LSTRLPMRSSRGARIHKLMGEEAEADASFWGQEAWQEDGE-DDDYSTEAEEDDVVDSDFD 77
[Close]
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Match: A0A1W0A6E7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6E7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.720e-5
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 1 
Query:  142 LSVKLIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPDKFDKDFNDSES 333
            +  +L  RS+RG RI++L GEDAEADETFWG   W E E  D ++S+E EE D  D DF++ E+
Sbjct:    2 MGYELPQRSSRGSRINKLVGEDAEADETFWGNDVWAEGE--DEDYSTEAEEEDTVDSDFDEEEN 63
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FIM9_ECTSI4.290e-12371.15YL1_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CH45_9STRA5.090e-1941.99YL1_C domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9D960_9STRA3.820e-938.94Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3YB55_HETAK5.500e-957.89Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9YAX8_9STRA7.330e-926.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D0NCC4_PHYIT1.860e-629.46Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
H3GID9_PHYRM5.510e-628.63Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S3ZP53_9STRA1.070e-533.81Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A484E6I0_BRELC2.130e-556.67Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A1W0A6E7_9STRA2.720e-551.56Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:979374..985546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FIM9
Preferred nameVPS72
PFAMsYL1,YL1_C
Model size1191
Max annot lvl2759|Eukaryota
KEGG koko:K11664,ko:K14859
Hectar predicted targeting categorysignal peptide
GOsGO:0000122,GO:0000123,GO:0000228,GO:0000785,GO:0000790,GO:0000812,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016569,GO:0016570,GO:0016573,GO:0016604,GO:0016607,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019827,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034728,GO:0035019,GO:0035267,GO:0036211,GO:0042393,GO:0043044,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070603,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0097346,GO:0098727,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1903506,GO:1903507,GO:1904949,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons5
Evalue7.03e-124
EggNOG OGsKOG2897@1|root,KOG2897@2759|Eukaryota
Ec32 ortholog descriptionYL1 domain protein VSP72
Ec32 orthologEc-27_000360.1
Descriptionhistone exchange
Cds size1188
COG categoryS
BRITEko00000,ko03009,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791242.110819-CDS-P-littoralis_Contig6:979375..9798281680791242.110819-CDS-P-littoralis_Contig6:979375..979828Pylaiella littoralis U1_48CDSP-littoralis_Contig6 979376..979828 -
1680791242.1253507-CDS-P-littoralis_Contig6:980986..9811271680791242.1253507-CDS-P-littoralis_Contig6:980986..981127Pylaiella littoralis U1_48CDSP-littoralis_Contig6 980987..981127 -
1680791242.1390421-CDS-P-littoralis_Contig6:982241..9824391680791242.1390421-CDS-P-littoralis_Contig6:982241..982439Pylaiella littoralis U1_48CDSP-littoralis_Contig6 982242..982439 -
1680791242.1498992-CDS-P-littoralis_Contig6:983743..9838501680791242.1498992-CDS-P-littoralis_Contig6:983743..983850Pylaiella littoralis U1_48CDSP-littoralis_Contig6 983744..983850 -
1680791242.159888-CDS-P-littoralis_Contig6:985257..9855461680791242.159888-CDS-P-littoralis_Contig6:985257..985546Pylaiella littoralis U1_48CDSP-littoralis_Contig6 985258..985546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.243.1prot_P-littoralis_Contig6.243.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig6 979376..985546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig6.243.1

>prot_P-littoralis_Contig6.243.1 ID=prot_P-littoralis_Contig6.243.1|Name=mRNA_P-littoralis_Contig6.243.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp
LASLPLLSLSLPLSPFSVVASTRRRHAMSLAAERRRKAKALEDAGAALSV
KLIARSTRGQRISELQGEDAEADETFWGQGAWQEEEEGDSEFSSEEEEPD
KFDKDFNDSESEEEDDDGNEENRLRKNERAAKRKKPAGGVYKEPKGFVAK
KRKAAAPPGGSGAGGETNSSSAQGGGDWSDRTPHTLTKRTMRASTKNKTE
KSLEVREGEAKAREAQLKRSTPQLKKTLKGHFTQKQLLHEAIQTEQENMR
WILKQRRLEDEAKEDEGRPKQHKILASRYVSRRGCVDTIFFPDAYYLPPV
LCQPAAADSEDAPAAAAAGAAGDGGNGNNSGGGRRYDRRCKITGAPALYK
DPLTGYSYANAAAFRQIRKRYGAAARRRLKDQRQDQEESEAASGGA
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mRNA from alignment at P-littoralis_Contig6:979374..985546-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig6.243.1 ID=mRNA_P-littoralis_Contig6.243.1|Name=mRNA_P-littoralis_Contig6.243.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6173bp|location=Sequence derived from alignment at P-littoralis_Contig6:979374..985546- (Pylaiella littoralis U1_48)
CTCGCTTCTCTCCCTCTTCTCTCTCTCTCACTCCCCCTATCTCCATTCTC
TGTCGTCGCTTCCACCCGACGACGACACGCTATGTCGCTTGCTGCGGAGA
GGCGAAGAAAAGCCAAGGCTCTCGAAGACGCTGGGGCGGCGCTGTCAGTC
AAGCTCATCGCTCGATCCACGCGCGGACAACGCATCAGCGAGCTTCAGGG
GGAGGATGCCGAGGCGGACGAGACGTTTTGGGGGCAAGGAGCGTGGCAGG
AGGAGGAGGAGGGGGACTCTGAGTTCAGCTCGGAGGAAGGTAAGAGAGAA
AAGTAGCGTGATAAACTGTCTGCCTAGCTGCAAACTTCCTTTCTGCTGCT
GTCCTTGTGTGGATGCGGTGTGTATTTCCTTCCTAGTCCTCATCATAGCT
CACCGCTATGAGTGCAACTCGGGATTGTTGACTCTACTTCCAACATAAGG
GCTGCTGGAAAGTCCTTCTACTGTTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTGTACAAGCACCGTGACTGCTGTAGCTCCCCAAGATGTTTCCT
ATTGGTCTATCCGGCAGCACCTTGTCACCCCAATTATATACCCTACGGTG
TGGTGTGAGGCAAAAGAGGCAAACTAACCGCACTGATGTGACTCGTAAAT
GGCACCTGGAAATATCATCCTCCGGTACTGCGGTATGATATGATATCGTT
CCGCGCAAGTACTTACACATGGGTAAATATGCACTTGTACGTACCGTACG
GTAGTGCTACAGCAGTGGTACTGCTTACAGCAGCACTGCTGTACGGGCCG
TCCAGCAGTACTCCGTTATTTTTACAGTACTAGTATCTGTACCTGTTGAT
GTACAGGGAGACAGCTCCCTGCCGCTATTTTTAGAATGAGCTCTTTGCAG
CCTTCGAACAGCTGTGGGTGTGCGCGAGCGGAACGGTAATACGGAGTACG
AAGCACGTTACTTCCACGGCGTTCCATAATCACGGCCGTGTTTCTCTACG
TGCGTAGTGCCGTTTCTGATCACTGCACTATCAAAACAAGTCGTGTATAC
CATGGAAAACTAACAGCCTTATACGAGTGCTGTGTGCGCGGCTCCTCTGC
GCGCGTTGAGAACGACACCGCCCGCGGTAAAGAGCATACTGCTGTATTAT
GCAAACTACGCTGTCTGCTGTGCAACACGCCATGTCCCATATATCATGGG
CGTGCTCAGTCGGTCGTTCCTTCACATGTGCCCGCCCGCCTATTATTTTT
CGCTTTTTTTTTTTTGGGTACGCCTGCCGTTCGTGCGTGAGCCGCGTGTG
TGATCTAACATTTACAATATGGTATGTGTGTTTGTTGGCATCCCCATTCA
TTCACGACGCCAGTCTACACCTTTCGGCATACGTTGGGCGCACCAGCCGG
GGTGGGGTCACGACAGATAGGAAGAAGATAAAAACACAAGTGGTTGCTGT
TTTTTTTCTTTCGCAACCGCAGAATATGCGAGAAACAAAACAAAAATGTA
CTGGTGGACGTCTGGACGTATCATATGCACCCGTCGTTGAGTCGCATGAC
ATCATCGCATGGCACCACCGCATGACATCACCGCATGACATCATCACGTG
ACATCATCGCCTGATATCATCGCATGAACATCATCGCATCGCCATCGATC
GCCCGGCCCACCCACCCACCCACCCACCCACCCAACCACCCACCAGAGGA
GCCTGACAAGTTCGACAAGGACTTTAACGATAGCGAGAGCGAGGAGGAGG
ACGATGATGGCAACGAGGAGAACAGGCTCCGAAAAAACGAGCGAGCCGCA
AAGGTAACAAGAGATTGGACTTGCCTGCTCGTATATACGATAACAGCAGG
AGTCGTTGATTGTCACATTAGCTCACCACCACCATAGTCTAGCACGTGGT
CACAAAAAAGGCACGTATCGTGCCATGAAAGGAGGAAAATAAAATAAAAA
GGAAATAAACGATGGTCACCCAATCAGAATCAGATATACTCCGGAGTATT
ACCGTTGGGGTACCATCTGTGGTGGCCAAAAGTACGAAAATACAAAAATA
CAGAATAAGCAGGCTCGAAAAAAAACAAAAACAAAAAAAATGGAAACAGA
GTGTAAGTGGTTGGCTAGAAAGGAGCTTCGCGTGCCGTCGCCAGTGCTTG
GTTGATCGGACGACAGCCTCAAACATAAGACGTTTAGACCGTCTGCAGCA
GCAGTTGACTTGATGATAGCTCCGCACGACGTCCAGATTGCCGACCTGCA
GGCGTTGTCGTGTTGGTCAACGCGCAAGAGATTCTGTATTTTTTTTCGCG
TGCGCCGACCGGGGTTTACAGGGATTCTGTGTCTCTTATCGCTTGCTACT
CTCCAGCTCCCGATATTCCAGAAGGGTCGGCGGAGGTTTGAAATGTGCGT
TGTTGTGCCGCGCCTCGACAGCGTCGATGTTTGGGAGTTTTTTTGTTGCA
CCTTGAGTTGCCGGTGGAAGCTCTCGCTTGAGGGAGTGAGCTCCTTGCGG
AAGCTCCTCGCCATATCATAGTATCACACGCGCGGTAAATCTTGTTCACG
CATTTTTTCCGACACGCACTGGTGACCTTTTGCAAGGGTGCAATCGCCGG
CAGGTCTGTCTCACGCCAAAACTATGTCTTATTGTCGCGATAAGGAGAGA
AGATTGCCTGCCATGTAGGGATACAACTGCTGTACGGGTAATTTGTACGA
AGAATATATGATACGATGTCTTTCGAAGTAGGATATACATCGTGCACAGG
AACACGTTCTGTTCAATACTGTGAAAAGGCGGTGAGTCCCCCGACTACGC
TAGCTCTTCGTTCAAGCTTGTCGATGGTCGAACAATTTTCCCCCACTATC
CCCCCCCACACACACGCACACACACCTCCCTCTGTCGACGGATACATGTT
TTTTTTCCCTCTCTGTCTCCGTCTGTCTCTCTGTCTTCCCCTCTATGTTT
CTCTCTCTCTCCCCCTACCTCGCTCTCTCTCTCTCCCTCCCTCCCTCCCT
CTCTCGTTCTTTCTTGTCTCTCTTTGATACTGCTGCTGCTGTCGTGTGGA
AATGGTACCGTTCGCGCACCCCCTTTTCTCCCTCCCCTCGGCAACAAAAC
GAACCAGCGCAAAAAACCGGCGGGGGGCGTCTACAAAGAGCCCAAGGGTT
TCGTAGCAAAGAAGCGAAAGGCCGCGGCGCCGCCAGGGGGGTCAGGGGCC
GGGGGGGAGACGAATAGCAGCAGTGCACAGGGGGGTGGCGATTGGAGTGA
CAGGACCCCTCATACGCTGACCAAGAGGACCATGCGAGCTAGCACGAAGA
ACAAGGTACGAACAAGTGTTTGGCATTATTCGGCATTCGGCGGAGTTGTG
AAGATGGTGTGGTGTGGTGTAGTGTCACCCTCCCCTCCCCCCCCACGCCA
CTCCCCTGGGGGTAATTTTCTTCAATTCTCGGTTGAGAATTTTAAGTATC
CGCAGCAGGCATGGAGGGAGACATCAAGGCTTGCCAGTGCCGAAAAGGGT
GGCTGGCCGTGGGACTATGAAATGCTTTACTTGGAAGCATTAATCTTCTT
GAGAATATTCCTAGAGCCCTCTGCATGGAATGTAGATACTACTGCTGTAT
CATTCGTTAGTAAATACTTCGTTTTGGTGCGCAGCATTATGCTGTTGAAA
AAGCTGATTCGGGAGGGTGAACATGCCGGTGTACATACGATACAACACAC
CGCCGTGAAATTCGGTGGAATATGCATTGATGTTTTTTTGCCACAGGTAT
CGGTATCACCGTCCATTTTTCTCCATCAGAGGTGTTGTCGACGTGTCGGG
GAGCGAAGTGTTGAGTTTGTCTTTTTTTACGTGATAAAACGACGTTTTGT
TGCTTGCCATGTAGTGCCTGCTTGCTTGCGTGCGTGCGTGTATGTGAGAG
CTATTGGCGAGAGGTATGTGCAGGCAGTTGAACCAAAAACAATATGTGGA
ACAAGTGCTGCAGCAGTTTAGAAAAATTGATGAGCTGCATTATAGCGAGC
TGCTTCATTGGGCTCGCAGGCGGTATATGGTGGCGGTCACAACCTTGGCA
CCAGATAATCTCGCGGCTCCTTCCACATGCAACTTCTTGCTGTTAACTTA
GAAAATACCAAGTACCAGGTGTTAATTTGCCCCCACTTGGCGACAAGCCC
GGGCTAAATCGGGGCCGATGGATCAACCACGGCGATGAAATAATTTCAAC
ACGCCTCCGACTGGTTGCAGAAGAGTCGGGAACCAGCCTCGTACTCCCTG
TCTTTGCTGGGACTTTCCTACTTTTCCTCGTAAAAAATAATCCGAAGCGT
GTTGGAACGCTTGGAGGCACTCCAGCAACGCACCCCGCTAAACTAGCCCC
GTCTTGCCCCGTCCCCTTTCGCTCCTTCGGCTCCGTGTCCCCACGCCTCT
CATCGATTGCCAAATCCAGACGGAGAAAAGCTTGGAGGTGCGGGAAGGGG
AAGCCAAGGCGCGCGAGGCACAGCTGAAGCGATCCACCCCCCAGCTGAAG
AAGACCCTCAAGGGTCATTTCACCCAGAAGCAGCTCCTGCACGAAGCGAT
ACAGACAGAGGTGAGAGGCGCACGATCGAACTCGATGCCGGCCATTAGGC
TGCCGCGCTATGCAGCACACACCGCGCTAACATGGCTTTTTAAAGAGCTA
TCGCACCAGCGGGACGGGCTTTGGGTTGGCATTGAGCAGAGATCGGAACG
GCCATTAATGTGAAAACAACACGTACGTTTTCTGATTCCGTGGGAGCGCC
GAGGGTATCTGCGGCTTCGCTTCACCCTTCAACTGAATGTGGCCATCAAT
CTCACGAAATAGTGACTGGTACCTTCGGTGGGGTTGGCCCGTTATCGTGT
CTTGTTTCAGAACCGCGGCCTTTTCCCGCGGTTTAAAGCTCACTGAGCCA
TGTTTGCACGCTGAGCATGTCCCATTAGTTCTCCCATCACGACACGAAGG
TCCCTCAACGCGGCTAGCCGGAGGATGTTGGGCTGATATCCTGAGTCGGC
CGTGTCTTGCAGACGAAACTAGTGTTGTTTTTTCTTCAAGAGCTCTGTTG
TTGTTTGGAGTGTATCCTTCTGTTGAATATTCCGTCATCGATTATCCTCT
CATCATACCCAACGCCTGCGACACTTCGGCGGCATGTTCCCTCACAAATT
GGCCGCAAGCTACCCCTAGAAAAGTATCACACGCGTCTATTCTCACGTGT
CGCAAAATCGTCCTCCCATATGATGGCTCACACTCGGAACAAATGCGGTT
GGTTCTGGCGTGCAGATGCTACAGCCGTATTTTTTTCTCCATCATCCCCG
AAAGCGTTAACTTTATAATTAATCGTGAGGTACACCACGAGGTAGCCCCC
TCTATTGGGCAAAATACAAAACGTACCTTGGACCCCGAAACAGCGTTACC
TCGAAGCCGCAGCCAACACTTGCTGCTGCACAAGCAGCGTCTGTTGCATT
TCATGCATAAGTATACCCACGTTTTTTTGACAGTCCCTTTTGCCATCCCT
GTTTTTCAAAACACACATGCACATATTCTCCCACTCCTGTTGTGCCTGTT
ATACCTGCCAAAACCACTACTACAGCAACAACAAAAACTTACTTCGCCAT
GCCCTGTTGTTCCCCACAACGTGCACAACGCGCACATGCATCTGCTGCTC
CATCTTCCCTCTCCTGTAATGCCTGCTGTACGCACCAAACCGCTACGCCA
CACCACGCCACGCCACAGCAAGAAAACATGCGGTGGATTCTGAAGCAGCG
GCGACTCGAGGACGAGGCTAAGGAAGACGAGGGCCGCCCCAAGCAGCACA
AGATACTGGCCTCGCGCTACGTCTCCCGGCGGGGTTGCGTCGACACCATC
TTCTTCCCGGACGCGTACTACCTCCCTCCCGTCCTCTGCCAACCCGCGGC
CGCTGACTCGGAAGACGCGCCAGCAGCAGCGGCGGCAGGGGCAGCGGGAG
ATGGAGGCAACGGCAACAACAGCGGGGGTGGCAGGCGATACGACCGACGG
TGCAAGATCACGGGCGCACCGGCGCTGTACAAGGACCCGCTCACGGGGTA
CTCTTACGCCAACGCCGCCGCCTTCCGGCAGATCCGAAAGCGGTACGGGG
CTGCCGCCCGCCGGCGGCTGAAAGACCAGCGGCAGGACCAGGAGGAGAGC
GAGGCGGCTAGTGGAGGGGCGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig6:979374..985546-

>mRNA_P-littoralis_Contig6.243.1 ID=mRNA_P-littoralis_Contig6.243.1|Name=mRNA_P-littoralis_Contig6.243.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig6:979374..985546- (Pylaiella littoralis U1_48)
CTCGCTTCTCTCCCTCTTCTCTCTCTCTCACTCCCCCTATCTCCATTCTC
TGTCGTCGCTTCCACCCGACGACGACACGCTATGTCGCTTGCTGCGGAGA
GGCGAAGAAAAGCCAAGGCTCTCGAAGACGCTGGGGCGGCGCTGTCAGTC
AAGCTCATCGCTCGATCCACGCGCGGACAACGCATCAGCGAGCTTCAGGG
GGAGGATGCCGAGGCGGACGAGACGTTTTGGGGGCAAGGAGCGTGGCAGG
AGGAGGAGGAGGGGGACTCTGAGTTCAGCTCGGAGGAAGAGGAGCCTGAC
AAGTTCGACAAGGACTTTAACGATAGCGAGAGCGAGGAGGAGGACGATGA
TGGCAACGAGGAGAACAGGCTCCGAAAAAACGAGCGAGCCGCAAAGCGCA
AAAAACCGGCGGGGGGCGTCTACAAAGAGCCCAAGGGTTTCGTAGCAAAG
AAGCGAAAGGCCGCGGCGCCGCCAGGGGGGTCAGGGGCCGGGGGGGAGAC
GAATAGCAGCAGTGCACAGGGGGGTGGCGATTGGAGTGACAGGACCCCTC
ATACGCTGACCAAGAGGACCATGCGAGCTAGCACGAAGAACAAGACGGAG
AAAAGCTTGGAGGTGCGGGAAGGGGAAGCCAAGGCGCGCGAGGCACAGCT
GAAGCGATCCACCCCCCAGCTGAAGAAGACCCTCAAGGGTCATTTCACCC
AGAAGCAGCTCCTGCACGAAGCGATACAGACAGAGCAAGAAAACATGCGG
TGGATTCTGAAGCAGCGGCGACTCGAGGACGAGGCTAAGGAAGACGAGGG
CCGCCCCAAGCAGCACAAGATACTGGCCTCGCGCTACGTCTCCCGGCGGG
GTTGCGTCGACACCATCTTCTTCCCGGACGCGTACTACCTCCCTCCCGTC
CTCTGCCAACCCGCGGCCGCTGACTCGGAAGACGCGCCAGCAGCAGCGGC
GGCAGGGGCAGCGGGAGATGGAGGCAACGGCAACAACAGCGGGGGTGGCA
GGCGATACGACCGACGGTGCAAGATCACGGGCGCACCGGCGCTGTACAAG
GACCCGCTCACGGGGTACTCTTACGCCAACGCCGCCGCCTTCCGGCAGAT
CCGAAAGCGGTACGGGGCTGCCGCCCGCCGGCGGCTGAAAGACCAGCGGC
AGGACCAGGAGGAGAGCGAGGCGGCTAGTGGAGGGGCG
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