mRNA_P-littoralis_Contig6.239.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig6.239.2
Unique NamemRNA_P-littoralis_Contig6.239.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: D7FIM7_ECTSI (Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM7_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 6.570e-168
Identity = 232/259 (89.58%), Postives = 243/259 (93.82%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLRPPNPDTLLSAELLSVDGTPARMAAAEGEVNAF 1030
            HRVVFLRHGESTWNRDDR+IGWTDVPLTEKGE EAL AGRALR+EGFEFDVVF+S+LKRVLKTEHIVM ELDQLWVPE+KD+RLNERHYGDCIGKTKPEAE+AFGKENVALWASSYD+APHPMSTDGLYYPK DRRY HVVDE+G CAIPRTECMKDVS RVVGYWEEEI PVVRSGKRVLVAGHANMLKTLLQHLDGIPDD IV MKVPRATP+VY L  DMKPLR P PDTLLSAELLSVDG PARMAAA+GEVNAF
Sbjct:   22 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYQHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVTMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF 280
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A350LK84_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Sutterella sp. TaxID=1981025 RepID=A0A350LK84_9BURK)

HSP 1 Score: 254 bits (648), Expect = 3.280e-78
Identity = 115/225 (51.11%), Postives = 157/225 (69.78%), Query Frame = 2 
Query:  260 VVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            VVF+RHGES WN ++R+ GWTDV LTEKG+ EA KAG  +R  G EFD+ F+S+LKR ++T +I + E D+L++P +KDWRLNERHYG   G  K E  K FG+E V +W  SYD+ P  ++ D   YP  D RY+ + DE     +P TEC+KD   RV+ YW+E I P V+SG RVLVA H N L+ L++H+DG+ D+AIVG+ +P   P+VY  D++M+P+R
Sbjct:    4 VVFMRHGESQWNLENRFTGWTDVDLTEKGQAEARKAGALIREAGLEFDIAFTSVLKRAIRTLYIALDETDRLYLPVIKDWRLNERHYGALQGLNKAETAKKFGEEQVHVWRRSYDVPPPALTKDDPRYPGNDPRYAFL-DE---AQLPLTECLKDTVDRVIPYWKETIEPAVKSGMRVLVAAHGNSLRALIKHIDGMTDEAIVGLNIPTGRPLVYEFDDEMRPIR 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: K1Y1M5_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K1Y1M5_9BACT)

HSP 1 Score: 251 bits (641), Expect = 3.660e-77
Identity = 108/227 (47.58%), Postives = 159/227 (70.04%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            ++VV LRHGESTWN+++R+ GWTDV L+E G  EA  AG  L++EG+ FDV ++S+LKR ++T  + +  +D +W+P  ++WRLNERHYG   G  K E    FG++ V +W  SYDI P+P++TD   YP KD RYS + ++     +P+TEC+KD   R + YWE+ I P V+SGK+VL+A H N L+ L+++LD I DD IV + +P A P+VY LD+++KP++
Sbjct:    2 YKVVLLRHGESTWNKENRFTGWTDVDLSETGIKEATNAGLTLKKEGYTFDVAYTSVLKRAIRTLWLTLDTMDLMWIPVYRNWRLNERHYGALQGMNKSETAAKFGEDQVLVWRRSYDIPPNPLTTDDPRYPGKDPRYSDLTEKT----LPKTECLKDTVARFIPYWEDTIAPAVKSGKKVLIAAHGNSLRALVKYLDNISDDEIVKLNIPTAVPLVYELDKNLKPIK 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: UPI000A17839F (2,3-diphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Derxia lacustris TaxID=764842 RepID=UPI000A17839F)

HSP 1 Score: 251 bits (641), Expect = 3.910e-77
Identity = 110/227 (48.46%), Postives = 157/227 (69.16%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            H++V +RHGES WN D+R+ GWTDV +TE G  EA  AG+ L++EG+ FD+ F+S+LKR ++T + V+ ELDQLW+P  K WRLNERHYG   G  K E    +G E V +W  +Y IAP+P++ D   +P+ D RY+ +        +P TEC+KD   RV+ YW+E I P ++SGK+V++A H N L+ L+++LDGI DD IV + +P A P+VY LD+D+KP+R
Sbjct:    2 HKLVLIRHGESQWNLDNRFTGWTDVDITENGAREAKAAGQLLKQEGYSFDIAFTSVLKRAIRTLNTVLDELDQLWIPVEKHWRLNERHYGALQGLNKSETAAKYGDEQVLVWRRAYAIAPNPLALDDERHPRFDARYADL----DPALLPATECLKDTVARVLPYWDETIAPTLKSGKKVIIAAHGNSLRALIKYLDGISDDDIVSLNIPTARPLVYELDDDLKPIR 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A554WS00_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=5 Tax=Burkholderiales TaxID=80840 RepID=A0A554WS00_9BURK)

HSP 1 Score: 251 bits (640), Expect = 8.690e-77
Identity = 111/227 (48.90%), Postives = 155/227 (68.28%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            H++V +RHGESTWN ++R+ GWTDV LT  G  +A+ AGR LR EG++FD+ F+S+LKR + T   V+ E+D+ W+P VKDWRLNERHYG   G  K +  + +G++ V LW  SYD+ P  +  D     + DRRY+H+  E     IP TEC+KD   RVV YW+E I P +R+G+RVL+A H N ++ L++HLDGI D  IVG+ +P   P+VY  D+D++PLR
Sbjct:   18 HKLVLIRHGESTWNLENRFTGWTDVDLTPTGIAQAIAAGRLLREEGWDFDLCFTSVLKRAIHTLWYVLDEMDRTWLPVVKDWRLNERHYGALQGLNKADMARQYGEQQVLLWRRSYDVPPPALQPDDPRGQRHDRRYAHLRPEQ----IPLTECLKDTVARVVPYWDEAIAPAIRAGRRVLIAAHGNSIRALIKHLDGISDADIVGLNIPNGVPLVYEFDDDLRPLR 240
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A7C5ENZ6_9DELT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Desulfobacca acetoxidans TaxID=60893 RepID=A0A7C5ENZ6_9DELT)

HSP 1 Score: 250 bits (638), Expect = 1.030e-76
Identity = 113/227 (49.78%), Postives = 156/227 (68.72%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            +++V LRHGES WNR++R+ GW DV L+EKG +EAL+AGR L REGF FDV F+S+LKR +KT  +V+ E+D +W+P    WRLNERHYG   G  K E  +  G E V +W  SYD+ P P++ D  YYP +D RY++V  E     +P +EC+KDV  R + YW E + P V+SG+RV++A H N L+ L+++LD I D  IV + +P   P+VY LD+D+KPLR
Sbjct:    2 YKLVLLRHGESVWNRENRFTGWIDVGLSEKGVEEALEAGRVLAREGFVFDVAFTSVLKRAIKTLWLVLEEMDLMWIPIHHSWRLNERHYGALQGLNKVETVERHGMEQVKIWRRSYDVPPPPLTPDSPYYPGRDPRYANVPKEE----LPLSECLKDVVARFLPYWHETLAPAVKSGQRVIIAAHGNSLRALVKYLDNISDADIVELNIPTGIPLVYELDQDLKPLR 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A7Y9LJ59_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Pigmentiphaga litoralis TaxID=516702 RepID=A0A7Y9LJ59_9BURK)

HSP 1 Score: 249 bits (637), Expect = 1.550e-76
Identity = 109/227 (48.02%), Postives = 154/227 (67.84%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            +++V +RHGES WN D+R+ GWTDV LTEKG +EA KAG  L+REG+ FDV ++S+LKR ++T  I +  +D +++P +  WRLNERHYG   G  K E    +G E V +W  +Y IAP+P+  D   +P+ D RYS +        +P TEC+KD   RVV YW E I P +++GKRVL+A H N L+ L++HLD + DD IVG+ +P A P+VY LDE++KP++
Sbjct:    2 YKIVLMRHGESQWNLDNRFTGWTDVDLTEKGREEARKAGELLQREGYGFDVAYTSVLKRAIRTLWIALDTMDAMYLPVINSWRLNERHYGALQGMNKSETAAKYGDEQVLIWRRAYAIAPNPLDIDDERHPRFDPRYSAL----SAAELPATECLKDTVERVVPYWNESIAPAIKAGKRVLIAAHGNSLRALIKHLDNVSDDEIVGLNIPTAQPLVYELDENLKPIK 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A1J4SB84_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Desantisbacteria bacterium CG1_02_38_46 TaxID=1817893 RepID=A0A1J4SB84_9BACT)

HSP 1 Score: 249 bits (635), Expect = 2.880e-76
Identity = 114/226 (50.44%), Postives = 152/226 (67.26%), Query Frame = 2 
Query:  257 RVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            ++V LRHGES WN+++R+ GWTDV L+EKG  EA KAG  L+ EGF FDV F+S+LKR ++T  IV+ E+D +W+P    WRLNERHYG   G  K E  + FG+E V +W  SYDI P  +      YP  D RY  + DE G   IP TEC+KD   R + YW E I PVV+SGK+V++A H N L+ L+++LD +PDD IV + +P   P+VY LDED+KP++
Sbjct:    3 KLVLLRHGESEWNKENRFTGWTDVDLSEKGIQEAKKAGDVLKSEGFIFDVAFTSVLKRAIRTLWIVLDEMDLMWIPVYNSWRLNERHYGALQGLNKSEMAEKFGEEQVLIWRRSYDIQPPALEKTDERYPGNDPRYKDL-DEKG---IPLTECLKDTVARFLPYWHENIAPVVKSGKKVIIAAHGNSLRALVKYLDNVPDDKIVSLNIPTGIPLVYELDEDLKPIK 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A1A6DUD1_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Tepidimonas fonticaldi TaxID=1101373 RepID=A0A1A6DUD1_9BURK)

HSP 1 Score: 248 bits (633), Expect = 5.560e-76
Identity = 111/227 (48.90%), Postives = 155/227 (68.28%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            H++V +RHGESTWN ++R+ GWTDV LT  G  +A+ AGR L+ EG++FD+ F+S+LKR + T   V+ E+D++W+P +KDWRLNERHYG   G  K +  K +G E V +W  SYD  P P++ +     ++DRRY+ +  E     IP TEC+KD   RVV  W + IVP +RSG+RVL+A H N ++ L++HLDGI D  IVG+ +P   P+VY  D+DMKPLR
Sbjct:    2 HKLVLIRHGESTWNLENRFTGWTDVDLTPTGVSQAMSAGRLLKAEGWDFDLCFTSVLKRAIHTLWYVLDEMDRVWLPVIKDWRLNERHYGALQGLNKADMAKQYGDEQVLVWRRSYDTPPPPLAPNDPRGQRQDRRYAALPPEQ----IPLTECLKDTVARVVPCWNDTIVPAIRSGQRVLIAAHGNSIRALIKHLDGISDTDIVGLNIPNGIPLVYEFDDDMKPLR 224
[Close]
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Match: A0A1G3ZHV3_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 TaxID=1802433 RepID=A0A1G3ZHV3_9BACT)

HSP 1 Score: 248 bits (633), Expect = 5.740e-76
Identity = 110/227 (48.46%), Postives = 152/227 (66.96%), Query Frame = 2 
Query:  254 HRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALKAGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRYSHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLR 934
            +++V +RHGES WN+++R+ GWTDV L+EKG  EA  AG  L+REGF FD+ F S+LKR LKT  IV+ ELD+LW+P  + WRLNERHYG   G  K E    +G E + +W  SYD+ P P+ T    +P  D RY+ V  E     +P TEC+KD   RV+ YWEE+I PVVR GK+V++  H N ++ L++HLD + ++ I+   +P   P+VY LD+D+KPLR
Sbjct:    2 YQLVLIRHGESVWNQENRFTGWTDVDLSEKGVIEAKAAGELLKREGFSFDIAFVSLLKRALKTLWIVLDELDELWIPMERSWRLNERHYGALQGLNKSETAAKYGDEKILIWRRSYDVPPPPLETSDERFPGNDPRYADVPKEE----LPLTECLKDTIERVIPYWEEKIAPVVRQGKKVVIMAHGNTIRALMKHLDQLSEEEILHTNIPTGIPLVYELDQDLKPLR 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.239.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM7_ECTSI6.570e-16889.58Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A350LK84_9BURK3.280e-7851.112,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
K1Y1M5_9BACT3.660e-7747.582,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
UPI000A17839F3.910e-7748.462,3-diphosphoglycerate-dependent phosphoglycerate ... [more]
A0A554WS00_9BURK8.690e-7748.902,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A7C5ENZ6_9DELT1.030e-7649.782,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A7Y9LJ59_9BURK1.550e-7648.022,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1J4SB84_9BACT2.880e-7650.442,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1A6DUD1_9BURK5.560e-7648.902,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1G3ZHV3_9BACT5.740e-7648.462,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:959878..966649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIM7
PFAMsHis_Phos_1
Model size1499
Max annot lvl2759|Eukaryota
KEGG rclassRC00536
KEGG koko:K01834
KEGG ReactionR01518
KEGG Pathwayko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230
KEGG ModuleM00001,M00002,M00003
Hectar predicted targeting categorysignal peptide
Exons6
Evalue3.61e-172
EggNOG OGsCOG0588@1|root,KOG0235@2759|Eukaryota
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-1
Ec32 orthologEc-27_000330.1
EC5.4.2.11
Descriptionregulation of pentose-phosphate shunt
Cds size969
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.239.2prot_P-littoralis_Contig6.239.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig6 960344..966585 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791241.848422-UTR-P-littoralis_Contig6:959877..9603431680791241.848422-UTR-P-littoralis_Contig6:959877..960343Pylaiella littoralis U1_48UTRP-littoralis_Contig6 959878..960343 -
1680791241.9421563-UTR-P-littoralis_Contig6:966585..9666491680791241.9421563-UTR-P-littoralis_Contig6:966585..966649Pylaiella littoralis U1_48UTRP-littoralis_Contig6 966586..966649 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791241.8672812-CDS-P-littoralis_Contig6:960343..9605741680791241.8672812-CDS-P-littoralis_Contig6:960343..960574Pylaiella littoralis U1_48CDSP-littoralis_Contig6 960344..960574 -
1680791241.8823135-CDS-P-littoralis_Contig6:961071..9612131680791241.8823135-CDS-P-littoralis_Contig6:961071..961213Pylaiella littoralis U1_48CDSP-littoralis_Contig6 961072..961213 -
1680791241.8944454-CDS-P-littoralis_Contig6:961793..9619201680791241.8944454-CDS-P-littoralis_Contig6:961793..961920Pylaiella littoralis U1_48CDSP-littoralis_Contig6 961794..961920 -
1680791241.9060547-CDS-P-littoralis_Contig6:963674..9637781680791241.9060547-CDS-P-littoralis_Contig6:963674..963778Pylaiella littoralis U1_48CDSP-littoralis_Contig6 963675..963778 -
1680791241.92227-CDS-P-littoralis_Contig6:965721..9658271680791241.92227-CDS-P-littoralis_Contig6:965721..965827Pylaiella littoralis U1_48CDSP-littoralis_Contig6 965722..965827 -
1680791241.9325476-CDS-P-littoralis_Contig6:966326..9665851680791241.9325476-CDS-P-littoralis_Contig6:966326..966585Pylaiella littoralis U1_48CDSP-littoralis_Contig6 966327..966585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig6.239.2

>prot_P-littoralis_Contig6.239.2 ID=prot_P-littoralis_Contig6.239.2|Name=mRNA_P-littoralis_Contig6.239.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
MCSISCAFFLGGISTTAHAFVSSGLMYSALQQRDRSHQQTFLMKEGSDHE
QRAKETVADESNHHRVVFLRHGESTWNRDDRYIGWTDVPLTEKGEDEALK
AGRALRREGFEFDVVFSSMLKRVLKTEHIVMGELDQLWVPEVKDWRLNER
HYGDCIGKTKPEAEKAFGKENVALWASSYDIAPHPMSTDGLYYPKKDRRY
SHVVDENGVCAIPRTECMKDVSYRVVGYWEEEIVPVVRSGKRVLVAGHAN
MLKTLLQHLDGIPDDAIVGMKVPRATPMVYHLDEDMKPLRPPNPDTLLSA
ELLSVDGTPARMAAAEGEVNAF*
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mRNA from alignment at P-littoralis_Contig6:959878..966649-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig6.239.2 ID=mRNA_P-littoralis_Contig6.239.2|Name=mRNA_P-littoralis_Contig6.239.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6772bp|location=Sequence derived from alignment at P-littoralis_Contig6:959878..966649- (Pylaiella littoralis U1_48)
GGTACCTGCTGTGCTGCATCACCTCTCTCGTTATCTCTCTCCGCCCCTTT
CCCGTATACCCGACATGTGCTCGATATCATGTGCTTTCTTCCTGGGCGGG
ATATCGACTACTGCCCACGCCTTTGTCTCATCAGGGTTGATGTACTCTGC
TCTTCAACAGCGGGACCGAAGTCACCAGCAGACATTCCTGATGAAGGAAG
GGAGCGATCATGAACAACGGGCAAAAGAGACCGTTGCTGATGAATCAAAT
CACCACCGTGTAGTGTTCCTTCGGCATGGGGAATCAACATGGAATAGAGA
CGACCGTTATATAGGCTGGACCGGTGAGACGGAGAGCGAGATGACCCAAA
CCATCCGTGGGTTGCTGACTGTTGGCCTTATCAAAGATCGTATACAAAAG
TGGGAATTTGCGTCAGAGGCAAGTGCTGCTGCCTGCACATGCAGCGCTCA
TTTGACCGCCCTCTCTCTTCGTTTATTTCTCGAGATCAGGATACATGAAC
TGCTGTGCATCCAGCAATCATTTCATGTGTCCGTAGGTTAACTGTAATGG
AAATAGTTTACAAACTGCACCGCTCGCCGATGCTTTCAAAAGGGACACGA
TAGCTTCAGCAAGCATCATGTACGTTTATCGTTCTACATACGGAGTACAT
TCGAAGTGTATTTTTGAGTCTCGTACCCGCGTGATGTGGATGATTGATCG
ACTTATACATTCGTGTGAAGCAGCAACACGTTCCGCTGAGCACCTGTGCA
GCAGGGTCTGTCACACGCATATATATACATGCACCAGACTCTCGCGCTGC
ACCTACTGTATCGCATCGACAGACGTCCCGCTCACAGAGAAGGGCGAAGA
CGAAGCTCTGAAGGCAGGGCGAGCCCTACGAAGGGAAGGTTTCGAGTTCG
ACGTGGTGTTCTCATCGATGCTGAAGCGGTGAGATTTCGAGACCTCATTT
TCGTTTCCAGGCCCAATAGGCTGTCTGCGGCGAGATTTCGAGACTTTCTT
TTCCCTTTTCAGGCTGAATAGGCTGTCTGCTGTCATCCTATGCACCCTCG
GTAATTCTTCTGCTGTCCAGTAGCGCAATGACCTGGACAACACGCTCGAA
ATGCACACGCTATCCGGAAAATTATGATGTTTCATGGTAAGCACTGCTGT
GCCCCGCGAAGCAAAGTTTCGCACCAGTCCCTCCGTGCATTACAGATCGA
CTCTACTGTGAAATACAAACCATTATATTTGCCGCGACAAACAAATTTCG
CATGTCGCAGATATAAATATTCGTGTAGTCTTCTGTACTCCTTCACGAAA
CCCGTGTGTGGTGCCACCCTCCTTAACAACTCATTTTTCGAAAACTTTCT
CCGATCTATCACTCTTCAGCCGCAGAGCGGTACAGCACAGCAAAGTGCAG
CACAGCGCGGCACAACGCAGCACAACACAACATAGCCTAGGAGTAATATG
GAAGGGAAAAAGTGTAATGTTCGACCACAAGTATATCAACTATTTTTTCG
CTGGTAACACCTGGCATTTCAATTTTCTCCGTCACGAGCCTTCCCCCGAT
TGGGGATGAGCATCAAAATTGAGCAATATGCTTTATTGACTTTCGAGTCC
AGTCAACTCGTTGCGTATGTATGCTTTATCAGCACCTCACTTATGCTCTC
TTTACCTCCTAAAAAAACGTCGTAACGTCGTTGGTGGGCATTACTCACAT
CTCATACATACATCGTCGTGGTATGTACAGCAGCAGCAGATTTATACTAC
TGCTTGTATAAATGTGTGATGCAAGAACAACAGACATAACAACCGCAGAC
ATCTGATGGAGGATGGGCAACATGCAGCGAGAAGTAGCATTTCACGTGCC
AGCAGAGAACATACACCGCAAACATTCGAACGCAACAGCTGTAGAGTACA
TAGATAATGGGTATGATAGCCAGCGAGAACTTCATTCCAAGCGTGTGTCT
ATGTAAACCGCGACGATAATCAGAGTGTGCAGAGAGAGGGGAGAACAGCA
GACAGCGGCAAACGGGGGTTCCCAAGAGAGGCCGAAGGCTTGTGTCTCGA
GGGGCGCAGAGAAGTGTAGATACAGAAAAACCTTCAAGCAAGAAAAAATG
GGCATCTGGGATGGACAGAGTATGATACATACTGAAAAAGAGAGAGCAGC
TGGCAACACAGTAGCACCACGGAATATACATTCCTAGATGTGTCGGCGGC
AGAATCGCGGCCAGTCGAACCTTCTCATATCCGAACCAATCGATCCAGCT
CATCGCGGGCCTTCGTCGCGGCCTCTGCGTGTATTGAGTGCGTGCGCGGC
TGGTGTGCTCGTGCACTTCGGCAGCAGACATGCCCTCTTGAAAGCAGCGA
GATTGCGTCGTATTTAGCTGTGTGCGGCGCCCCTTCGAGTGTACGAAGAG
GAACGTTTTTGTTCGACATAAAAGAAAAGGCAGGCTACTCGACTGGCCTC
CTTCTGAAGAGCTCAGTCCCACGGGGGTTAAAAAGGAAGTTTGATTGTCG
AAGAAAGAGCAAACTGTTTTTTTTGTGTTGCTCGTACTGTAGAATGGTGA
GTTGGCATTGTTTTCGGAAACGCAGGGTCACGCCAGGCTGCTCTTCATGG
CATGCTTCTTCTCTGGGTCATTCCGTCGATAGGAGCAGAGATCTACCGTA
ACAAGTAGAGTCGGAGTGCTTACCAAGAGGGCTGCGGAGTACGTCAACAG
GAGGAGGGGTAGCAGTGGCCGGCCAACGCAGGTGGCCACGAAGCAGTGTA
TTTTTCTTCGCACGCAAAAATGAATTAAGCACGTGCTATTTCCTGTAGAT
GCGTGATTGCCCCGCCACAGGGAAAACTGACTCCACTGGTGTTGCTGTCC
TTCGCGCCTTCGAAAGCGTAGTGTGCTGAAAACCGAGCACATAGTGATGG
GCGAACTTGACCAGCTCTGGGTGCCCGAGGTCAAGGACTGGCGACTCAAT
GAGCGCCACTACGGGGACTGCATAGGTAAGACAAAGCACTCGAGGTACAA
AATGACTTGGGAAATGTCGCCACTTTATGCAGCAGCAGTAACACCCATGT
TTATGGTCGCCGTATCTGGCCGTCAAAAGTAAAAGTTTGTCAAATTTTTA
GGTCAAGATCTATTTCACTGCCTATGGGTAAATATGTCGTCCAAAATGTC
GTCCAAATTTTCCAAACCGGCCCAAACGGGACCAAATCAGTAAAAGTTGG
CCCAACATCTCACCGTCCCAGCAGCCGCAAATATCTTGTTAGAAGCGACG
AGATTACGATACACCACCACGCTTCAGCAAGCAACACCAGCGACTACGCC
ATGAAATCTGAACGCAGTGAGCTGGCCAAAGCCTCTGTGCAACCCTAGAG
TCACTGTGCCAACACCTCTGCTGCTGGTATGTGGCGGAAGTTTGCCAGGC
ATGCAAAAAATATATATATTTGAATAGGGGATCTTCAAAAGGTAGGTATA
ATGTGTGGCCTGACCTGCGTGTGACACCTCAGGCACACAGGAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGTGTTGAAGGCGAGATAATATCAGAATACCA
CAGCAGTTATGTTCTCGCTCCCTACACCACCAGTCATGATGAAACCTTGT
TGGCTACCATCTCCATTCATCGCTATCCGTCAGCAGGACTTTGAGCTGGC
CGTGGGCTCATGCAATCAGCAGGGAGAAGCATCGCTCGCTGTGCTGTGTA
TCGAAATCTTCTTTAGAATCATTTCCGCGGTACAACATTATGGGCTCTAT
TTCGAGGTATATAAAAATGAGGAAAATATGTTGTCTGTATTTTCAGTTTG
GCAGGTCGGACCCAGGAGCGATGCTTCTCTCGGCCGATTGAACGGATGCA
CGGCCACCTCAACACCCTGTTGACAAAGAAAGAGCAGTAAATAGAGGTGA
CAGCCGGAAAGGTTTGACCTTGATAGGTTGTGTAGTGAGAGATAAAGTGA
CTGCGGTGTTCTGATGTTGCCTTCAATCTTCAACTGCTGCTGCTGTGCCT
AACTCACACGCACGTTTGTGGGCCTTGGGCCTGCAAACTTCCGACAAAAA
AATGGAAAAAATAAAAAAGAGACCAACATCTCGCCGCATTTGGAAGATCT
ACGAAACACGATATTGTTCTCCATAGGCAGCGGGACGATATCTTCGAAAA
GTGGACATCTACCTCCTAAATGTTGTTTGACATTTGAGCAAACTTTCACT
TTTGACGGCCAGATATGGCGACCATAAACAGGGGTGTAACCAACTCTAGT
TCTCATCCTAAGGAGTTCCGTTTCCATTCAGAAACTCTGAGTTGTACCGC
GCGAGTTTAACGTCGGCACATCTATAGACTGCCCTTCCAAAGCACGAAAG
CCAGACAGTTCTGAGAGCGCCGTAAAAATGTGCTGTTTTCCTCCTACATC
ATGGCACGTCGGACTTTTGTAAGAAGGCATGCTTTGTAGTCAGAGCCCAC
CGGACGTCAACTTTGTTTATTGCGCCGTGCACGCGGAAGCTGTATCTGAA
CATTGTCAGTTTTGGCTGAGCAGTGTGATTCGTTACATCCACGAAGAGCG
CCAGTGCCCAGGCGATTTACGATTGCCTCAACCCCTTGAAGTATGTTGTC
AACATCGCGTGCCCTGTGCCCCTACCCAGTTTTGAGGAATTTTATGCTGT
TATCGAACCTTCCACTCACGGTTGATGTCTGCGTTTCGCCGCCTTGCACC
AAAACATGTCTGTGTCTTTGTGCCACCAGGCAAGACCAAGCCGGAGGCAG
AGAAAGCCTTCGGAAAGGAGAACGTGGCACTTTGGGCGTCGAGCTACGAC
ATTGCGCCGCACCCAATGAGCACGGACGGTCTTTACTATCCCAAGAAGGA
CCGAAGGTTTGCTTCGCTGTGCGTGCTCGTGCTTTGTGGTCGTGTACATG
TGATGCTTGCGCAGCAGGTCATACAGCACTCACGACGGCCTTCTTGGTAC
GTGGTACGCGAGAAAGCGAGAAATGTTTAATTTTATCCAATGCTGTTCGG
TTGGTCCTATCCGCGTCGCCTGTCGGGCAACCTCTTGTTTTGTTGTTTTG
TGTTTTCGTTCATGTACCACCATGTCACGCCGTGCTGTGCGTGTATATCA
CAGCTTGAGATGTAGTATTTCTGGACTCCCTGTAGTCCCCTCTGCTTTGA
ATGATGGTGTGTACAGAGCAATATCTCTGATGGACTCACTGGAATGAAGG
CAGCGAGCAACACCGCCGCAGGGACGAAAGCGATCGGATCTGGCGAGGCC
ACGGCAGGGCTTACGGTGCCGACCGACATAGCATAGAAGATAACAAACAT
TTGCTCATTCCCAAGGCCGGAGGAGTGGAGGATTGTATCAATCAACGCGA
GCTCGTGAAACCAAAGCCCTGTTTTAATTTTTTCTCTGACAACTTGTTTT
TGCCCCAACCGCCATCTGCATTTTCTACGCTTCAAGGTACAGTCATGTCG
TCGATGAAAATGGGGTCTGCGCGATCCCTCGGACGGAGTGCATGAAGGAT
GTTTCCTACCGAGTGGTGGGGTACTGGGAGGAGGAGATAGTGCCGGTCGT
TAGGAGCGGCAAGCGCGTGCTGGTGGCGGTGAGACAACCGTATTCTATCC
CGACAGATTTTAGTTCGTTCCGGACACGTAGTATTTCTTTGACCCTGATT
CCAACAGTGACGTGTCAAAATGTAGGTTCCCTTTCGTGTGATCACTATTG
CGGTCGGAGTGGTGTGATATGCTCGGAGACAGCCAACCGACCCGTAGCAA
TGTTTCCATGGGAAGACTTCCGGGGGGCGGATTATCGGGCGGTATGTTAA
CGCTAAATCCCCTTCCCTTTGGCTGTTCTCTCTAGTGTGTTGGACATCCT
CCGCTGGAGTACTCTCTATCTTGTTCCGCCACTTTCGCTCATCCTTCATC
TGTTTGTCTGTCTGTCTGTCTCTCTTTCCCTCTCTCTCTCCATCGCTTTC
GCGTTCTCTCCTCTCTCCTCTCTCTCCTCCCTGCATCTCTCTCTCTCTCT
CTCTCTTTCCCATCTCCTCCCCTCCCCTGTCTCTGTTTCTCTCTTTCTGG
GTGGGAATTTCGCTCGGTCGCGTAGGGCCACGCGAACATGCTCAAGACAT
TGCTGCAGCACCTCGACGGTATCCCCGACGATGCCATTGTTGGGATGAAG
GTTCCTCGTGCCACCCCGATGGTTTACCACCTGGATGAAGACATGAAGCC
GTTGCGACCACCCAACCCCGACACGCTGCTGAGCGCCGAACTTTTGTCCG
TCGACGGCACTCCCGCCCGCATGGCGGCAGCAGAAGGAGAAGTGAACGCT
TTTTAGGCAACTGCTGCTGCTTTACTACTGCTACAACATGTTTGACTTAT
TTTTTTTTGCTGGCAGTGTCGTATACTGCTGTACCACGTATTGTGTATCG
TAGCCAGTTTATCGAATGTGGCGTTACGGGGTAGAGAGACATGCCGGTGA
TGGCTCTTAAGTACGAAGGTGGTAGAGACGGCAGCAGCAACAGCGACAGC
AGCAACGGTACCAGTGCGGCGCAACTTTAATCCAGACACAAAGAGGCGTG
CTGTCACTTGAATTTTTCTGGAGAAGGCATGATGCGCCCCCTACGGTGCA
GCAGTACATGCTTCGAACAACGGTGAAAACACGAAGAAAGTTGTGCGTCT
TGGTGTTACCTGCTGCTTTTTGGTACCACGTTTCCATCGATCACCGTGTC
TGGAGCTGACGCAAGGGGTACACGAACTAATCTGAGTATGAGTGGGATGG
ACTCAGGAATTATTAGCGCTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig6:959878..966649-

>mRNA_P-littoralis_Contig6.239.2 ID=mRNA_P-littoralis_Contig6.239.2|Name=mRNA_P-littoralis_Contig6.239.2|organism=Pylaiella littoralis U1_48|type=CDS|length=969bp|location=Sequence derived from alignment at P-littoralis_Contig6:959878..966649- (Pylaiella littoralis U1_48)
ATGTGCTCGATATCATGTGCTTTCTTCCTGGGCGGGATATCGACTACTGC
CCACGCCTTTGTCTCATCAGGGTTGATGTACTCTGCTCTTCAACAGCGGG
ACCGAAGTCACCAGCAGACATTCCTGATGAAGGAAGGGAGCGATCATGAA
CAACGGGCAAAAGAGACCGTTGCTGATGAATCAAATCACCACCGTGTAGT
GTTCCTTCGGCATGGGGAATCAACATGGAATAGAGACGACCGTTATATAG
GCTGGACCGACGTCCCGCTCACAGAGAAGGGCGAAGACGAAGCTCTGAAG
GCAGGGCGAGCCCTACGAAGGGAAGGTTTCGAGTTCGACGTGGTGTTCTC
ATCGATGCTGAAGCGTGTGCTGAAAACCGAGCACATAGTGATGGGCGAAC
TTGACCAGCTCTGGGTGCCCGAGGTCAAGGACTGGCGACTCAATGAGCGC
CACTACGGGGACTGCATAGGCAAGACCAAGCCGGAGGCAGAGAAAGCCTT
CGGAAAGGAGAACGTGGCACTTTGGGCGTCGAGCTACGACATTGCGCCGC
ACCCAATGAGCACGGACGGTCTTTACTATCCCAAGAAGGACCGAAGGTAC
AGTCATGTCGTCGATGAAAATGGGGTCTGCGCGATCCCTCGGACGGAGTG
CATGAAGGATGTTTCCTACCGAGTGGTGGGGTACTGGGAGGAGGAGATAG
TGCCGGTCGTTAGGAGCGGCAAGCGCGTGCTGGTGGCGGGCCACGCGAAC
ATGCTCAAGACATTGCTGCAGCACCTCGACGGTATCCCCGACGATGCCAT
TGTTGGGATGAAGGTTCCTCGTGCCACCCCGATGGTTTACCACCTGGATG
AAGACATGAAGCCGTTGCGACCACCCAACCCCGACACGCTGCTGAGCGCC
GAACTTTTGTCCGTCGACGGCACTCCCGCCCGCATGGCGGCAGCAGAAGG
AGAAGTGAACGCTTTTTAG
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