prot_P-littoralis_Contig6.236.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.236.1
Unique Nameprot_P-littoralis_Contig6.236.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length466
Homology
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BLAST of mRNA_P-littoralis_Contig6.236.1 vs. uniprot
Match: D7FIM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM5_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 6.130e-26
Identity = 163/432 (37.73%), Postives = 210/432 (48.61%), Query Frame = 0 
Query:    7 LQRMFDRLEDEAECEQEALRLRVAAETAALKATMTFSRASAVASVEREMELSKAXXXXXXXXXXXXXXXASFPNAKPLTSPSCLSLXXXEPEPELARQDAEDDRARLLVVIEENRRLGDENRCLAEEASLLRTQREEDNRRLASKMTALRVKXXASRRLASDACALRGQAGEMSASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGSVRPC-----AVSSSGPGCPADGQRPASPNPEEEGIMVVSGGGGISGSGMDXXXXXXXXXXRVVAISCTGQGVKGAEEGSATDDGLAAAPAEGADHIERAMVAPRPALLPTRRRRLSAAPGNALPPGC-SVGDSSSSRGRSRR-----GEGGGIGHEKEKKGAVGRKTRR--DIQRAMIEKEAEQVYLELKANPPPEIRALLAARTQMEKVAAAARSTLKDLK 425
            L ++  RLEDEAE EQEALRLR+ AE + +KATMTFSRASA+ SVE++MELSKA            XXX                 XXX       R+D   D  RLL   EENRR          EA LLR++ EE  +RLA +++ALR K       A++AC+LRG      AS                             GG  +  PC     AV+   P  PA+GQRPA+   E  G+M+ S    +  SG +           VV  +  G  V+  E  ++ + GLAAA    A  +    + P P+  P   RR SA  G+AL     SV +SSS+  R  R     G                  +RR  ++QRA IE+EAE+VYLEL+ANPPP IRALL AR +M+K+ A ARSTL+ LK
Sbjct:   23 LLQVLGRLEDEAEREQEALRLRIDAERSEVKATMTFSRASAIKSVEQQMELSKAREAEGAWLRAQQXXXXXXXXXXXXXXXXXXXXXXXX-----TREDLVGDGGRLLR--EENRRXXXXXXXXXXEAFLLRSEAEEA-KRLAGELSALRAKEDVGS-TAAEACSLRGDMSVAGASG----------------------------GGGCTSEPCVGAARAVAGGVPASPAEGQRPAT---EVSGVMLPSE---VRDSGSNG----------VVGAAAVGA-VQ--EPPASANCGLAAA---SAGRLGLMSIEPGPS--PAWPRRSSATGGSALSDNIVSVSNSSSNNSRGERDSRSEGXXXXXXXXXXXXXXXXXXSRRKGELQRA-IEEEAERVYLELRANPPPAIRALLEARGEMDKLVAEARSTLEGLK 392
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIM5_ECTSI6.130e-2637.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:947434..953110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.236.1mRNA_P-littoralis_Contig6.236.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 947365..954410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.236.1 ID=prot_P-littoralis_Contig6.236.1|Name=mRNA_P-littoralis_Contig6.236.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=466bp
MQVSRHLQRMFDRLEDEAECEQEALRLRVAAETAALKATMTFSRASAVAS
VEREMELSKAREAEEARLRFEQEAQASFPNAKPLTSPSCLSLSLPEPEPE
LARQDAEDDRARLLVVIEENRRLGDENRCLAEEASLLRTQREEDNRRLAS
KMTALRVKREASRRLASDACALRGQAGEMSASAAAAAAAAAAEEVSKAAA
AGGSSSSSSSSGGVGSVRPCAVSSSGPGCPADGQRPASPNPEEEGIMVVS
GGGGISGSGMDGGSGGGNGGGRVVAISCTGQGVKGAEEGSATDDGLAAAP
AEGADHIERAMVAPRPALLPTRRRRLSAAPGNALPPGCSVGDSSSSRGRS
RRGEGGGIGHEKEKKGAVGRKTRRDIQRAMIEKEAEQVYLELKANPPPEI
RALLAARTQMEKVAAAARSTLKDLKSSELVFGRQQEELRRQQQQQDEQEQ
SSPPPLDQDPGTDDR*
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