mRNA_P-littoralis_Contig6.216.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig6.216.2
Unique NamemRNA_P-littoralis_Contig6.216.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A6H5KE38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE38_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 4.250e-160
Identity = 256/327 (78.29%), Postives = 283/327 (86.54%), Query Frame = 3
Query:   72 MADSSTNPQIENRGTATAQPLIRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIESLDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCVTTTSTENGEKRQEVAREGEEGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            MAD +   Q ++ G   AQ LIRKLTTEKAVKAHRQQT++  A+E DI N+KL+SRGIK IESL+LPSLRRLDLSKN+LNRLKGL GCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVL++NEI+EVPPTWLKKGLLSLNTLVLSHNK+KSLS  GLGRLTALTKLS+S+N LVELPDLSACSGLEELRAAHN+++QVP+SL+KNAALRTLDLGHN ID W+GLERLG SLKSLMQLSL+GNP+C    + E   KR     +GEE       +YVAKVRSLFP LKVRDGKRILMKKSH Y
Sbjct:    1 MADGTIVRQKKDGGGGAAQSLIRKLTTEKAVKAHRQQTQQTSATEHDITNVKLTSRGIKTIESLELPSLRRLDLSKNSLNRLKGLQGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLSDNEISEVPPTWLKKGLLSLNTLVLSHNKLKSLSGTGLGRLTALTKLSISYNTLVELPDLSACSGLEELRAAHNIVTQVPASLSKNAALRTLDLGHNNIDDWVGLERLGESLKSLMQLSLSGNPICGAAAAAE---KRGTGEEDGEE-------DYVAKVRSLFPGLKVRDGKRILMKKSHTY 317          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: D7FIN7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN7_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 3.140e-149
Identity = 426/662 (64.35%), Postives = 466/662 (70.39%), Query Frame = 3
Query:   72 MADSSTNPQIENR--GTATAQPLIRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIESLDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCVTTTSTENGEKRQEVAREGEEGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSHRYXXXXXXXXXXXXXXXXXXXXXXDLSGPGSRGKSRNASTNVRVGRDGGGSPEVPVKTAGGAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGS-LDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTGQHQQEDPYSSSEELPIPGRGRAKGGGAGGVVVGKAAKGATKTVATGPAGGDRESAVVSVVINKKRKGAAGAKAKPWQGGAAVAVAEAGGG---FSVDAMLEARGLKETIGLGSGKWAWD 2039
            MAD +   Q +++  G   AQ LIRKLTTEKAVKAHRQ+T++   +EDDI N+KL+SRGIK IESL+LPSLRRLDLSKN+LNRLKGL GCPQVTYLTAA NELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVL++NEI+EVPPTWLK+GLLSLNTLVLSHNK+KSLS  GLGRLTALTKLS+S+N LVELPDLSACSGLEELRAAHN+++QVP+SL+KNAALRTLDLGHNRID W+GLERLG+SLKSLMQLSL+GNP+C    + E     +E   +GEEG       YVAKVRSLFP LK         +   +                           PGS  K+R   ++   G DGGG  +   +  G                                    G+   KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          PYSSSEELPIPGRG      A      K A  A   V        RES VVSVVIN KRKGA   KAK  Q  +A      GGG   FSV AMLEARG KETIGLGS   AWD
Sbjct:    1 MADGTIVRQKKDKDGGGDAAQSLIRKLTTEKAVKAHRQETQQTSITEDDITNVKLTSRGIKTIESLELPSLRRLDLSKNSLNRLKGLQGCPQVTYLTAASNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLSDNEISEVPPTWLKQGLLSLNTLVLSHNKLKSLSGTGLGRLTALTKLSISYNTLVELPDLSACSGLEELRAAHNIVTQVPASLSKNAALRTLDLGHNRIDDWVGLERLGKSLKSLMQLSLSGNPICGAAAAAEKSGTGEE---DGEEG-------YVAKVRSLFPGLK---------RGGEQGAGAGAGGGRKDSALRGTTPGTGGKRAPGSGTKARPVKSD---GVDGGGGDKSGDREGGQLVSRKPKEESSRPKEMRVGQQGQGSGASSANMDEEGAGTSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYSSSEELPIPGRGDGGDSLAREEPAAKRAADAAVPV--------RESGVVSVVINTKRKGA---KAKARQDSSAAGRPGGGGGLGGFSVGAMLEARGQKETIGLGSRVSAWD 629          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A835Z8M8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M8_9STRA)

HSP 1 Score: 226 bits (577), Expect = 6.120e-59
Identity = 151/356 (42.42%), Postives = 197/356 (55.34%), Query Frame = 3
Query:  129 PLIRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIESLDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLS-LNTLVLSHNKVKSLSDAGLGRLTALTK-------------------------------------------LSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCVTTTSTENGEKRQEVAREGE------EGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSH 1046
            P I+KLTTEK +    ++     A+E     +KL  R I+ IE+L LPSLRRL+L  N L RL+ L GC  VTYL    NELTG+GLDGVR L DL V NA+ N+++ +P AVF  FR LQ LVLN+N IA VP TW KKG+ + LNTLVLSHN + SLSD+GL +L  LTK                                           LS SHN L E+PDLSAC+               P  L++ AALR LDLGHN + +W  +++L  +  +L+QL+L G P+   T+    GE++Q  A +G       E + E   EY +K++ LFP LK +DG+R L K SH
Sbjct:    4 PAIKKLTTEKVL----EELGVVSAAE--CTELKLVGRKIEKIETLQLPSLRRLELGGNKLKRLRALQGCTLVTYLKVDNNELTGEGLDGVRCLPDLNVLNAAHNQIKTVPAAVFGAFRGLQVLVLNDNAIAAVPRTWWKKGVAAALNTLVLSHNAIASLSDSGLDKLAMLTKRDAAAARRGAAMPSAAAAIITERSERCFYERCCGLDKFAMLTELSASHNQLSEMPDLSACAXXXXXXXXXXXXXXXPVWLSELAALRLLDLGHNAVSEWSEVKKL-TTAPALVQLTLRGCPISGVTSVP--GEQQQHAAGDGAAPAAAVEEDAERVAEYESKMKKLFPKLKTQDGQRTLPKISH 350          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A2D4BR18_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR18_PYTIN)

HSP 1 Score: 171 bits (434), Expect = 2.650e-42
Identity = 111/290 (38.28%), Postives = 161/290 (55.52%), Query Frame = 3
Query:  222 IKLSSRGIKAIESLD-LPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLL---SLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLC---VTTTSTENGEKRQEVAREGEEGEEEDGG------EYVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            +  S RGI+ + S + L    +LDLS+N L +L  +     +T L    N+L G+GL  +R LK L   N + N V RIP  V     QL+ALVLNNN I  +   W+ K  +    LN+L++SHN++  L+   + RL  LTK+S++HN L ELPDLS+         + N +  VP SLA+   L+ L+LGHN ID W G+E L + L SL Q+SL GNP+    +  + T   E +++ + E +   +E         +Y  K++ LFP L +RDG R+L KK H Y
Sbjct:   40 VDFSGRGIETVLSFEGLNGATKLDLSRNKLTKLTNMKTVSNLTMLKLMENKLNGEGLAELRHLKKLVTLNIADNVVLRIPTDVLRHMSQLKALVLNNNSITTLE--WIPKLSVRGNQLNSLIVSHNRIPELAPRIVDRLPNLTKISMTHNLLEELPDLSSLKNXXXXXFSXNKLKTVPKSLAQLPKLKILELGHNEIDDWEGIEALSK-LDSLKQISLTGNPIYGVPLDASKTTETELKEDASAEDKAKMKEXXRLEAKHKQYNFKMKRLFPNLVIRDGHRVLNKKVHGY 326          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A7S1XKR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKR6_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.920e-39
Identity = 104/257 (40.47%), Postives = 152/257 (59.14%), Query Frame = 3
Query:  324 LNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKV-KSLSDAGLGRLTALTKLSVSHNALVELPDLSACSG-LEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCV--------TTTSTENGEKRQEVAREGEEGEEEDGGE----YVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            L   P +++L AA NELTG+GL G+  L+ L   NA  N+++ IPP  F + + L+ALVLN+NEI+     +LKK L  L  LVLS N++   L+      L +L K++++ NA+ ELPDLS C+  L ELRAA+N +  VP +L +   L+ ++LG NRI  W  L  L  SL+ +  LSL GNP+C            + E+G   +E   E EE E++   +    YV KVR LFP L V DG+R+++K++H +
Sbjct:    4 LAAVPLLSWLQAAENELTGEGLAGLHGLEALVTLNAGRNKIKAIPPGTFTRCKSLKALVLNDNEISATD--FLKK-LKGLTVLVLSRNQLGPQLNPRHFAGLRSLMKINLAGNAIEELPDLSPCAETLVELRAANNALRGVPQTLRRCKKLKVVELGSNRISSWRALAPL-TSLERITHLSLKGNPICTWAAEAPEAPAAAPEDG-SGEEPDTEEEESEDDKANKPATNYVDKVRELFPKLVVMDGQRVMLKRTHGF 255          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A396ZVE2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZVE2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.560e-33
Identity = 111/342 (32.46%), Postives = 171/342 (50.00%), Query Frame = 3
Query:  129 PLIRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIESLDLPS---LRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSV----------------------SHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCVTTTS-----TENGEKRQEVAREGE------EGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSH 1046
            P I+KLT EK    H   T   D          L+ RGI+ IE+    +   L+RLDLS N L R+   +    +T L    N L   G+  +   K L   + S N++ R+P A       L+ALVL  N +  +   W+   L  L +L++SHN++  +S   +G+L  LTKL +                      SHN L ELPDLSA   L ELRA++N ++ +P+S+  N  L+ +D+ HN ID + GL++   SL  L QL+L GNP+C   ++      ++ ++++E A   +      +  ++    Y  K++ LFP L VRDG+RI  K++H
Sbjct:   20 PKIKKLTKEKVADEHNSATDHLD----------LAHRGIETIETNAFDAATALKRLDLSANKLTRIAFTHNM-SLTQLKITSNVLVDAGIVDLSFCKQLVTLDLSDNKLARLPGASLRHCTGLRALVLTKNAMTSLE--WVPS-LPGLTSLIVSHNRITEISAKSIGKLKGLTKLQLYCTPPSILSMSLNQYGHYNYRSSHNKLTELPDLSALEQLTELRASNNQLTALPASINHNVNLKIVDVCHNHIDTFDGLDQW-TSLAQLKQLNLRGNPICGQNSTIPMELVDSAKEKEEDATVSQVDLAERKALDKKNKLYNFKMKRLFPALIVRDGQRIQDKRTH 346          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A067C9B1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9B1_SAPPC)

HSP 1 Score: 137 bits (346), Expect = 3.280e-31
Identity = 102/318 (32.08%), Postives = 154/318 (48.43%), Query Frame = 3
Query:  120 TAQPLIRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIES--LDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLC-----VTTTSTENGEKRQEVAREGEEGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            T +P I+KLT  K  +              D   + L+ RG++ +++   D  + ++LDLS N L R    +    +T L    N LT  G+  +   K L   +                      LVL  N I  +   WL   +  L +L++S N++  +S+  LG++  L K+S+SHN L  LPD++  + L ELR ++N ++ +P++LA N  L+ LD  HN ID W G E LG SLK L QL+L GNPLC       TT  E G+K  +   +           Y  K++ LF  L +RDG R+L K++H Y
Sbjct:    6 TEKPKIKKLTKNKVAEVL-----------GDKPVLDLTHRGVETMDAHACDGLTAKKLDLSHNKLTRFS-FSMAMTLTQLKITSNLLTDSGVGDLSHCKALVTLDXXXXXXXXXXXXXXXXXXXXXXLVLTKNSITSLD--WLPS-MPQLTSLIVSQNRIGDISEKALGKVKNLVKISISHNKLKALPDMAVLADLSELRISNNQLTALPATLANNRNLKILDACHNAIDTWDGFENLG-SLKQLKQLNLKGNPLCGVAAEAATTEDEAGKKAADKKNKL----------YNFKMKRLFETLIIRDGHRVLEKRTHGY 297          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A1V9ZQN7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQN7_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.470e-30
Identity = 96/286 (33.57%), Postives = 146/286 (51.05%), Query Frame = 3
Query:  216 ANIKLSSRGIKAIES--LDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLC-----VTTTSTENGEKRQEVAREGEEGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            A + L+ RGI A+++   D  +++++DLS N L R       P +T L    N LT  G+  V   K L   + S N++ R+P A       L+ALVL NN I  +   WL   +  L +L++SHN++  +S+  LG++               LPDL+    L          + +P +LAKN  L+ +D  HN +D W GLE L  SLK+L QL+L GNPLC       +T  ++ EK+++ A + +         Y  K++ LF  L VRDG R+L K++H Y
Sbjct:   25 AVLDLTYRGIAAMDAHACDDLTVKKIDLSHNKLTRFNFAMAMP-LTQLKITSNLLTDSGVADVSFCKQLITLDLSDNKLSRLPGASLRHCTHLKALVLTNNAITTLE--WLPS-MAQLTSLIVSHNRISEISEKALGKVKGXXXXXXXXXXXXXLPDLAVLENLSXXXXXXXXXTALPENLAKNRNLKIIDACHNAVDTWDGLENLS-SLKNLKQLNLKGNPLCGQPLDPKSTIEDDAEKKEKKALDKK------NKLYNFKMKRLFQGLIVRDGNRVLDKRTHGY 299          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: A0A662XYI4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYI4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 9.600e-30
Identity = 117/350 (33.43%), Postives = 164/350 (46.86%), Query Frame = 3
Query:  135 IRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIESLD-LPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAE--------VPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPD--LSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCVTTTSTENGEKRQEVAREGEE----------------------GEEEDG-----------GEYVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            I+KLT EK  +   +  K       D   I L+SRGI+ I SL+ L    +LDLS N L +L  L   P+VT L    N+L G+GL  ++ LK L + NA+ N+V RIP  V    R L+ALVLNNN I          V  +WLK       +L      V +        +  L  L VSHN + ++P   L     L ++  AH  +  + S LA    L+ L+L HN+ID W GLE L  SL++L QL++ GNPL         G+K + V + G++                       EE+              +Y  K++ LFP L VRD +R+L K+ H Y
Sbjct:   18 IKKLTAEKLAQFRNEIIKR------DGQQIDLTSRGIETIVSLEGLQQATKLDLSHNKLTKLSFLKAVPRVTMLKLTDNKLNGEGLAEIQHLKKLVILNAAENQVTRIPYEVMRNMRSLKALVLNNNSITTLDWMPKLPVCSSWLKNARNGSRSLCCRSKCVVNSFVCVPCNVQELNSLIVSHNRIAQIPQRILDWLPNLTKISIAHLCV--LLSILAAVENLKVLELSHNQIDDWAGLEALS-SLENLRQLNMTGNPLV--------GQKLEVVKKSGDDDXXXXXXXXXXXDGESTKIELSAEEKQKLKESKRLDAKHKQYNFKMKRLFPNLVVRDAQRVLDKRVHGY 350          
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Match: T0QV79_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QV79_SAPDV)

HSP 1 Score: 127 bits (320), Expect = 9.170e-28
Identity = 98/313 (31.31%), Postives = 148/313 (47.28%), Query Frame = 3
Query:  120 TAQPLIRKLTTEKAVKAHRQQTKEKDASEDDIANIKLSSRGIKAIES--LDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIAEVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVELPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLERLGRSLKSLMQLSLAGNPLCVTTTSTENGEKRQEVAREGEEGEEEDGGEYVAKVRSLFPILKVRDGKRILMKKSHRY 1052
            T +P I+KLT  K            D      A + L+ RG++ +++   D  S ++LDLS N L R    +    +T L    N LT  G+  +   K L                        +ALVL  N I  +   WL   +  L +L++S N++  +S+  LG++  L K+S+SHN L  LPD++A +           ++ +P++LA N  L+ LD  HN ID W GLE LG SLK L QL+L GNPLC         E   E     ++  ++    Y  K++ +F  L +RDG R+L K++H Y
Sbjct:   24 TEKPKIKKLTKSKV-----------DEVLGGKAVLDLTHRGVETMDAHACDGLSAKKLDLSHNKLTRFS-FSMAMTLTQLKITSNLLTDSGVADLSYCKALVTLXXXXXXXXXXXXXXXXXXXXXKALVLTKNAITSLD--WLPS-MPQLTSLIVSQNRIGEISEKALGKVKNLVKISISHNKLKALPDMAALADXXXXXXXXXXLTALPATLANNRNLKILDACHNAIDTWDGLENLG-SLKQLKQLNLKGNPLCGVAAEAATTEDEAE-----KKAADKKNKLYNFKMKRIFEALIIRDGHRVLEKRTHGY 315          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.216.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE38_9PHAE4.250e-16078.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIN7_ECTSI3.140e-14964.35Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z8M8_9STRA6.120e-5942.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4BR18_PYTIN2.650e-4238.28Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S1XKR6_9STRA1.920e-3940.47Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A396ZVE2_9STRA1.560e-3332.46Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A067C9B1_SAPPC3.280e-3132.08Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9ZQN7_9STRA1.470e-3033.57Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A662XYI4_9STRA9.600e-3033.43Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
T0QV79_SAPDV9.170e-2831.31Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:852841..856492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIN7
PFAMsLRR_4,LRR_8,LRR_9
Model size2072
Max annot lvl2759|Eukaryota
KEGG koko:K17579
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.8e-150
EggNOG OGsCOG4886@1|root,KOG0531@2759|Eukaryota
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-27_000450.1
Descriptionaxoneme assembly
Cds size1971
COG categoryL
BRITEko00000,ko01009,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.216.2prot_P-littoralis_Contig6.216.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig6 852912..856462 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791240.5765507-UTR-P-littoralis_Contig6:852840..8529111680791240.5765507-UTR-P-littoralis_Contig6:852840..852911Pylaiella littoralis U1_48UTRP-littoralis_Contig6 852841..852911 +
1680791240.6642296-UTR-P-littoralis_Contig6:856462..8564921680791240.6642296-UTR-P-littoralis_Contig6:856462..856492Pylaiella littoralis U1_48UTRP-littoralis_Contig6 856463..856492 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791240.5933158-CDS-P-littoralis_Contig6:852911..8531201680791240.5933158-CDS-P-littoralis_Contig6:852911..853120Pylaiella littoralis U1_48CDSP-littoralis_Contig6 852912..853120 +
1680791240.6092615-CDS-P-littoralis_Contig6:853357..8534181680791240.6092615-CDS-P-littoralis_Contig6:853357..853418Pylaiella littoralis U1_48CDSP-littoralis_Contig6 853358..853418 +
1680791240.6222355-CDS-P-littoralis_Contig6:853749..8539981680791240.6222355-CDS-P-littoralis_Contig6:853749..853998Pylaiella littoralis U1_48CDSP-littoralis_Contig6 853750..853998 +
1680791240.638421-CDS-P-littoralis_Contig6:854542..8546461680791240.638421-CDS-P-littoralis_Contig6:854542..854646Pylaiella littoralis U1_48CDSP-littoralis_Contig6 854543..854646 +
1680791240.6522777-CDS-P-littoralis_Contig6:855114..8564621680791240.6522777-CDS-P-littoralis_Contig6:855114..856462Pylaiella littoralis U1_48CDSP-littoralis_Contig6 855115..856462 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig6.216.2

>prot_P-littoralis_Contig6.216.2 ID=prot_P-littoralis_Contig6.216.2|Name=mRNA_P-littoralis_Contig6.216.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=657bp
MADSSTNPQIENRGTATAQPLIRKLTTEKAVKAHRQQTKEKDASEDDIAN
IKLSSRGIKAIESLDLPSLRRLDLSKNNLNRLKGLNGCPQVTYLTAAGNE
LTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLNNNEIA
EVPPTWLKKGLLSLNTLVLSHNKVKSLSDAGLGRLTALTKLSVSHNALVE
LPDLSACSGLEELRAAHNLISQVPSSLAKNAALRTLDLGHNRIDKWIGLE
RLGRSLKSLMQLSLAGNPLCVTTTSTENGEKRQEVAREGEEGEEEDGGEY
VAKVRSLFPILKVRDGKRILMKKSHRYYEQRGGEEGSGGGGGGGGGGGGD
LSGPGSRGKSRNASTNVRVGRDGGGSPEVPVKTAGGAEEGGDEEREKAER
KRKRKTARRAAAEEAAEAEALGSLDKKSKKRQRRKEREHAEEEEEKKGGS
RSAVETAAVPFEDAGASASKKDRRRSSVKAAAKAVAAAVTVVTADTGRAA
GSTPAGTSKQKANKKAKKKTTLDDTTSDGGGGSGSGSRTGQHQQEDPYSS
SEELPIPGRGRAKGGGAGGVVVGKAAKGATKTVATGPAGGDRESAVVSVV
INKKRKGAAGAKAKPWQGGAAVAVAEAGGGFSVDAMLEARGLKETIGLGS
GKWAWD*
back to top

mRNA from alignment at P-littoralis_Contig6:852841..856492+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig6.216.2 ID=mRNA_P-littoralis_Contig6.216.2|Name=mRNA_P-littoralis_Contig6.216.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3652bp|location=Sequence derived from alignment at P-littoralis_Contig6:852841..856492+ (Pylaiella littoralis U1_48)
GATGCTGGCTCTTGGGCTGTGGCGCAGCAAACAGGCTGCTCTCCCACCTT CCTCTGTTGTGTTGTGCGAGCATGGCTGATAGCAGTACCAACCCGCAGAT AGAAAACCGTGGCACTGCTACTGCCCAACCGCTAATTCGCAAGCTTACCA CCGAGAAAGCCGTCAAAGCTCACCGCCAGCAAACGAAGGAGAAGGATGCT TCGGAGGACGACATCGCAAACATCAAACTGTCATCGAGAGGAATCAAGGC GATCGAGAGCCTCGACCTGCCCTCTCTGAGGTTCGTTCAACATGCTGAAC GAATGAAGCAGATTCATATTTCGGAGGCTAGGGATAGCGGTCTGTTGTAG TGTTGGCAGCCTTCGACTTTCTTATTCCGCTGTCTGACTTGTCTACCCAA TTTTCTGCGCTCGACAGCAGTTCAGCGACTGCTGTATCCACTCAGTTTGA ATCTCATGAACACAACCCCCAAATCGATATGGTATCGTTGCACGTAACCC CGCTGCATCGTCTGCAGACGGCTGGACCTGTCCAAGAATAACCTGAACCG CCTCAAGGGGCTAAATGGCTGCCCACAGGTGACGCACCGCCGGTCGTGTT GTCAGTATTGGGCGACATCAACTTTGTTGAGCCACGTTGATATCCCTGCT GCATTGCTGCATGCTCTTGCTCTACGCTTTATCCGGTATGCAGCATGCAG CATACCAGGTCGTCAGGAATTGTGAGAGACCTGAGCAATTCGCATGTATG ATATCATCTTATGATATGATATCGTATTATCGTGTGCCTGATATGTGCGT GTGCTAAGCTACATGTCAACAGCAGCACCGCCCTTTTCGGTTGGTGTGGT GAACTCTGCCTGTTGCTCGTTCCCTGTTCCCTCCCATTCCGCTGCTCTGG ATGCGAAAGGTCACCTATCTCACCGCAGCGGGCAACGAGCTGACAGGCGA TGGCCTGGACGGAGTGCGTCCGCTCAAGGACCTCAAGGTGTTCAATGCCT CGGGCAATCGCGTGCGGCGCATCCCGCCGGCCGTGTTCGCGCAGTTCCGG CAGCTGCAGGCGCTGGTTCTGAACAACAACGAGATCGCAGAGGTCCCGCC TACTTGGCTGAAAAAGGGTCTGCTGTCCCTCAATACGCTCGTTCTTAGCC ACAACAAGGTAGGAACTACCGCTGCGTTTCCATGACGGACGTGCAGGATC GTGCCCGCAGAAAGGCATAAGTCTATCGCTTTAGCTGACCCATAAGCAAG TCGTTTCTACGGAGTCGACGCCGTGTTTCTGTTGGTATTGGTTCGATGTC CTATTCATTCGAAATAAATTACTCCGAAGTAATTTTTCTGGGGGGGGGGG TGTATCGAAAAGAGTGAAAAGGATTGGAGTGAAACGGGTTGAGTGGCTAG AAGCGGGTCACCGTCAAACCGACTCCGAAGCAGTTTTCTTAAATAAGTAT CGCATGACATGTGCCATGTGTATGTTGACGCCTGGTCACCTTTTCTGGAG AAGCTCTTCGGGATCCTGCATCGTACGTACGACAATCGGCTTTGCGATCA GCTACAATAGTACATAGCGTCAAGAGCAGCAGCCTTGACAAAAACGCGCC ACACACAAGCCTCTACGTAAACATGATGGTGCCGTGCTGATTCGGATTGA TCCCCTGGCAGTACTCACTTTAGTGCCTTTCTCCTTGCTTCCCTGTGTAC AGGTGAAGTCTCTGTCGGACGCTGGGCTCGGCCGGTTGACGGCGCTGACG AAGCTTTCGGTCTCCCACAACGCTCTCGTCGAGCTTCCCGATCTTTCGGC ATGCAGGTAACAAATTTCATCCTGCCAACACGATAAAGGGAACCAGGCCT TGTCAAGAGCGTATTTTTGGCGGGAGGAGACACTGCAGTCGTGAGAGCGT ATAATTTCGATCGCTCTCTGCGATTGCACTCAGGATGCAGGAGGTTCACA CAGGCAATGATTCCGTTGCTGGGGTGTCGCTCCTATCCTCCCCCCCCTAA CCCAGTTTCTCAAATATGCGCCGCCGCAGCAACTCCAACGAGACTCCCCA GTAGGCCGATGTGGTTCCGATCAATCGCTTCGTTATTTTCTAGTCCCTCC TCTTTGCATCTCTCTTTTGCGTGAGTTCATTGATTTCTCTCCATCTTACA TATTCCTCTTCGTCTCGTTCTGGCAAATATTTTGGTGTCGTCGTCGTCGC CGCCGTTTTTTTCTTTTCTTCTCTCGGCCCGCTCCCTCCCATCAATCAAA CCCTGTCTTGTGGCAAAAAAACAGCGGGCTGGAAGAACTCAGAGCGGCAC ACAACCTCATCTCCCAGGTCCCTTCGTCCCTCGCCAAGAACGCCGCCTTG CGCACGCTCGATCTGGGGCACAACCGTATCGACAAGTGGATCGGGCTGGA GCGTCTCGGAAGGTCCCTGAAGTCCCTCATGCAGCTCTCGCTCGCGGGGA ATCCGCTATGCGTCACCACTACCAGCACCGAGAACGGCGAAAAGAGGCAA GAAGTAGCCAGAGAGGGAGAAGAGGGAGAGGAAGAAGACGGAGGAGAGTA TGTGGCTAAGGTCCGGTCCTTGTTTCCAATCCTCAAGGTGCGGGATGGCA AGAGGATTCTTATGAAAAAGTCTCACAGGTACTACGAGCAGCGCGGGGGC GAGGAGGGTAGCGGTGGCGGCGGTGGCGGTGGCGGCGGCGGCGGCGGAGA TTTATCGGGGCCAGGGAGCAGGGGAAAATCCAGAAACGCGAGTACTAACG TGCGCGTCGGCCGGGACGGGGGAGGATCTCCAGAAGTACCTGTCAAAACT GCGGGGGGTGCTGAGGAAGGGGGAGATGAGGAGAGGGAGAAGGCAGAGCG GAAGCGGAAGAGAAAAACTGCTCGTCGTGCGGCGGCAGAGGAGGCTGCGG AGGCAGAAGCGCTTGGAAGTCTGGACAAAAAATCGAAAAAGCGGCAGCGG CGAAAAGAGAGAGAGCACGCGGAAGAGGAGGAGGAGAAGAAAGGGGGCTC GCGGTCGGCGGTAGAAACGGCTGCCGTCCCTTTTGAGGATGCTGGAGCAA GCGCGAGCAAAAAAGATCGTCGCCGGTCTTCTGTGAAAGCGGCGGCGAAG GCAGTGGCAGCGGCGGTGACGGTGGTCACGGCCGACACCGGTCGAGCTGC TGGTAGTACCCCAGCGGGCACATCGAAGCAAAAAGCCAACAAAAAGGCGA AGAAGAAAACAACGCTAGACGACACGACCAGCGACGGTGGCGGCGGTAGC GGTAGTGGTAGTCGTACCGGTCAACACCAACAGGAGGACCCGTACTCTTC GTCGGAAGAGCTACCGATCCCCGGAAGGGGAAGAGCAAAAGGAGGCGGGG CTGGTGGTGTGGTGGTGGGGAAAGCAGCAAAAGGCGCCACGAAAACCGTG GCGACAGGGCCGGCGGGCGGCGACCGAGAGTCAGCGGTCGTGAGCGTCGT GATCAACAAGAAGCGGAAGGGCGCCGCGGGCGCAAAGGCGAAGCCGTGGC AAGGCGGTGCCGCAGTAGCGGTAGCCGAGGCCGGGGGAGGGTTCAGTGTT GACGCCATGCTCGAGGCTCGCGGCCTGAAGGAGACGATTGGGTTAGGGTC GGGAAAATGGGCGTGGGACTGACTTGGTTGACAGGGACCGGAAGTGACGT AC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig6:852841..856492+

>mRNA_P-littoralis_Contig6.216.2 ID=mRNA_P-littoralis_Contig6.216.2|Name=mRNA_P-littoralis_Contig6.216.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1971bp|location=Sequence derived from alignment at P-littoralis_Contig6:852841..856492+ (Pylaiella littoralis U1_48)
ATGGCTGATAGCAGTACCAACCCGCAGATAGAAAACCGTGGCACTGCTAC
TGCCCAACCGCTAATTCGCAAGCTTACCACCGAGAAAGCCGTCAAAGCTC
ACCGCCAGCAAACGAAGGAGAAGGATGCTTCGGAGGACGACATCGCAAAC
ATCAAACTGTCATCGAGAGGAATCAAGGCGATCGAGAGCCTCGACCTGCC
CTCTCTGAGACGGCTGGACCTGTCCAAGAATAACCTGAACCGCCTCAAGG
GGCTAAATGGCTGCCCACAGGTCACCTATCTCACCGCAGCGGGCAACGAG
CTGACAGGCGATGGCCTGGACGGAGTGCGTCCGCTCAAGGACCTCAAGGT
GTTCAATGCCTCGGGCAATCGCGTGCGGCGCATCCCGCCGGCCGTGTTCG
CGCAGTTCCGGCAGCTGCAGGCGCTGGTTCTGAACAACAACGAGATCGCA
GAGGTCCCGCCTACTTGGCTGAAAAAGGGTCTGCTGTCCCTCAATACGCT
CGTTCTTAGCCACAACAAGGTGAAGTCTCTGTCGGACGCTGGGCTCGGCC
GGTTGACGGCGCTGACGAAGCTTTCGGTCTCCCACAACGCTCTCGTCGAG
CTTCCCGATCTTTCGGCATGCAGCGGGCTGGAAGAACTCAGAGCGGCACA
CAACCTCATCTCCCAGGTCCCTTCGTCCCTCGCCAAGAACGCCGCCTTGC
GCACGCTCGATCTGGGGCACAACCGTATCGACAAGTGGATCGGGCTGGAG
CGTCTCGGAAGGTCCCTGAAGTCCCTCATGCAGCTCTCGCTCGCGGGGAA
TCCGCTATGCGTCACCACTACCAGCACCGAGAACGGCGAAAAGAGGCAAG
AAGTAGCCAGAGAGGGAGAAGAGGGAGAGGAAGAAGACGGAGGAGAGTAT
GTGGCTAAGGTCCGGTCCTTGTTTCCAATCCTCAAGGTGCGGGATGGCAA
GAGGATTCTTATGAAAAAGTCTCACAGGTACTACGAGCAGCGCGGGGGCG
AGGAGGGTAGCGGTGGCGGCGGTGGCGGTGGCGGCGGCGGCGGCGGAGAT
TTATCGGGGCCAGGGAGCAGGGGAAAATCCAGAAACGCGAGTACTAACGT
GCGCGTCGGCCGGGACGGGGGAGGATCTCCAGAAGTACCTGTCAAAACTG
CGGGGGGTGCTGAGGAAGGGGGAGATGAGGAGAGGGAGAAGGCAGAGCGG
AAGCGGAAGAGAAAAACTGCTCGTCGTGCGGCGGCAGAGGAGGCTGCGGA
GGCAGAAGCGCTTGGAAGTCTGGACAAAAAATCGAAAAAGCGGCAGCGGC
GAAAAGAGAGAGAGCACGCGGAAGAGGAGGAGGAGAAGAAAGGGGGCTCG
CGGTCGGCGGTAGAAACGGCTGCCGTCCCTTTTGAGGATGCTGGAGCAAG
CGCGAGCAAAAAAGATCGTCGCCGGTCTTCTGTGAAAGCGGCGGCGAAGG
CAGTGGCAGCGGCGGTGACGGTGGTCACGGCCGACACCGGTCGAGCTGCT
GGTAGTACCCCAGCGGGCACATCGAAGCAAAAAGCCAACAAAAAGGCGAA
GAAGAAAACAACGCTAGACGACACGACCAGCGACGGTGGCGGCGGTAGCG
GTAGTGGTAGTCGTACCGGTCAACACCAACAGGAGGACCCGTACTCTTCG
TCGGAAGAGCTACCGATCCCCGGAAGGGGAAGAGCAAAAGGAGGCGGGGC
TGGTGGTGTGGTGGTGGGGAAAGCAGCAAAAGGCGCCACGAAAACCGTGG
CGACAGGGCCGGCGGGCGGCGACCGAGAGTCAGCGGTCGTGAGCGTCGTG
ATCAACAAGAAGCGGAAGGGCGCCGCGGGCGCAAAGGCGAAGCCGTGGCA
AGGCGGTGCCGCAGTAGCGGTAGCCGAGGCCGGGGGAGGGTTCAGTGTTG
ACGCCATGCTCGAGGCTCGCGGCCTGAAGGAGACGATTGGGTTAGGGTCG
GGAAAATGGGCGTGGGACTGA
back to top