prot_P-littoralis_Contig6.210.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.210.1
Unique Nameprot_P-littoralis_Contig6.210.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length443
Homology
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: D7FIP2_ECTSI (Pre-mRNA-splicing factor 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP2_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 2.240e-184
Identity = 387/444 (87.16%), Postives = 395/444 (88.96%), Query Frame = 0
Query:    1 MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAVRLEKEERVKNQTDLIRLRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEVPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRG--GGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKVR 442
            MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEA RLEKEER+KNQ DLIRLR+E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EDEVPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVS+DL+GSHLDAATGR++E  AGD + GDD  XXXXXXXXX                   G A  GD      XXXXXXXXXXXXXXXXXX      EA LDGEVKEMERNKLVRTFFRGLLKEWEMDLN RPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIY+LTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKR DIAPSKKVR
Sbjct:    1 MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAARLEKEERLKNQADLIRLREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQEDEVPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSSDLTGSHLDAATGRNDETAAGDGKAGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGAADKGDG----VXXXXXXXXXXXXXXXXXXEDAADKEAGLDGEVKEMERNKLVRTFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR 440          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: A0A836CGW5_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW5_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.230e-73
Identity = 115/151 (76.16%), Postives = 137/151 (90.73%), Query Frame = 0
Query:  291 VRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            VR FF+ LLK+WE DLN RP+ VK ++QG+ +T+TQKQ+KDY+RP+FKLCKQ AL  GIL NLV M+NFMKEGEFV+A+D+Y+LTAIGNAPWPIGLTMVGIHERSGRE+I S+NVAHIMNNEAQRKYLVS+KRLMT+LQ+KRTD+ PSKKV
Sbjct:   85 VRRFFKTLLKQWEEDLNARPEQVKGSIQGRRDTRTQKQSKDYLRPMFKLCKQHALNPGILANLVKMVNFMKEGEFVKAHDVYMLTAIGNAPWPIGLTMVGIHERSGREKIESRNVAHIMNNEAQRKYLVSIKRLMTWLQEKRTDVPPSKKV 235          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: A0A2D4CCV0_PYTIN (Pre-mRNA-splicing factor 18 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCV0_PYTIN)

HSP 1 Score: 218 bits (555), Expect = 2.950e-63
Identity = 140/318 (44.03%), Postives = 176/318 (55.35%), Query Frame = 0
Query:  124 EAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            E K RLR L  P+TLFGET  QR  RL  AE D    +++  L +GH++ N+F+G+               RD++   G   + D  D         AG  AA  A R                                       G  D   +D   KE+E + LV  FF+ +L  WE DL  RPDHVKRT QGKL TKT KQ KDY+RPLFKLCK++ +P  IL NLV ++ F + GEFVRAND Y+  AIGNA WPIG+TMVGIHER+GRE+I++   AH+MNNEAQRKY+ SVKRL++Y Q     + PSKKV
Sbjct:  121 EMKRRLRDLGHPVTLFGETMRQRMQRLRRAEHDAASRREE-ELGEGHDIRNQFVGHQ--------------RDDDEHEGPS-RDDVEDEATVPPEGRAGDSAAGLAARE-------------------------------------DGTDDPHAVDE--KELEDDVLVYRFFKSMLLRWEQDLADRPDHVKRTAQGKLATKTMKQCKDYIRPLFKLCKRRQVPADILPNLVEIVRFCRMGEFVRANDAYIRLAIGNAAWPIGVTMVGIHERTGREKINANKQAHVMNNEAQRKYITSVKRLISYAQSI-ASVLPSKKV 382          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: A0A5D6YA39_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YA39_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.220e-61
Identity = 142/322 (44.10%), Postives = 176/322 (54.66%), Query Frame = 0
Query:  120 VPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            +P  E K RLR    PITLFGE+   R  RL  AE D    Q+D  L  GH   + F G  +A  +  H + A G + +        G               +   R+A + A      A DGD+    X                       DE  LD         KLV  FF+  L+ WE DL  RPDHVKRT QGK+ TKT KQ KDY+RPLFKLCKQ+ +P  IL NLV ++ F ++GEFV AND Y+  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNEAQRKYL SVKRL++Y Q   +++ PSKKV
Sbjct:  109 LPWAEMKRRLREFGEPITLFGESARARVDRLRRAEHDAASWQED-ELEGGHRTRSRFAGEQAAQAA-EHAEDAAGFEGDXXXXXXSGGTQRAGGHGRDSAHGTSHHKRKAAKRAPT----ALDGDANDDDXDAR--------------------DERDLD---------KLVYRFFKAKLQAWERDLAARPDHVKRTAQGKIATKTMKQCKDYIRPLFKLCKQRQVPPDILPNLVEIVRFCRQGEFVLANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNEAQRKYLTSVKRLVSYAQSV-SNVLPSKKV 394          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: A0A7S2S6W9_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6W9_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.130e-60
Identity = 193/441 (43.76%), Postives = 239/441 (54.20%), Query Frame = 0
Query:    1 MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAVRLEKEERVKNQTDLIRLRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEVPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            M+ LKAEL  ++ +T EL AK G   GGR+FVRRG+   LE++E  +   D  R RQ  XXXXX                                                      ++P  E K+RLR++   ++ FGET   R  RL   EE+     DDF +  GH+  N FL     D   S ++    RDE              XXXXXXXXX                          XXXXXXXXXXXXXXXXXXXXXXXX              ++  +LVR +F+GLL++WEM LN RPDH KRT QGK++TKTQKQ KDY+RPLFKLCK K +P  IL NL  MI F KEGEFV+AND Y+ TAIGNA WPIG+T+VGIH+RS  +++    VAH+MNNE QRKYL SVKRL+ + Q++R D+ PSKKV
Sbjct:    4 MEALKAELSARRSKTEELKAKTGN--GGRKFVRRGDIAALEQKEARERTEDFERRRQXXXXXXXDDRRGGAELHERLIKRARVDRSADADAAEEAVAEGGAAAEGERVV---------DLPPDEVKSRLRSMGQVVSFFGETDTDRYLRLRKIEEEGVTGDDDFRMHGGHDTRNVFL---DQDSRRSGVE----RDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPVDDFQLVRDYFKGLLRDWEMQLNARPDHEKRTAQGKIDTKTQKQCKDYIRPLFKLCKHKEVPADILYNLKRMIMFAKEGEFVKANDAYIQTAIGNAAWPIGITLVGIHQRSAHDKVQVGQVAHVMNNEMQRKYLQSVKRLIRFEQNRRVDVPPSKKV 414          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: H3GWX1_PHYRM (Pre-mRNA-splicing factor 18 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWX1_PHYRM)

HSP 1 Score: 209 bits (532), Expect = 2.280e-60
Identity = 132/318 (41.51%), Postives = 174/318 (54.72%), Query Frame = 0
Query:  124 EAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            + + RLR L  PITLFGE    R  RL  AE D     +D  L  GH++ N F+G    +      DAA   +E                       A  R+ R++ R+ K      +D D+                                   + +E + +K+V  FF+G+L+ WE DL  RPDHVKRT QGK+  KT KQ KDY+RPLFKLCKQ+ +P  IL  LV ++ F ++GEFV AND Y+  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNE+QRKYL SVKRLM+Y Q   +++ PSK+V
Sbjct:   87 DMRRRLRELAEPITLFGEDMKARMVRLRRAEIDAATRHED-DLGAGHDIRNRFVGGDGGEQRDRADDAAEDAEE---------------------FEAEDRSGRKS-RSKK------EDADA-----------------------------------QAEEQDADKIVYKFFKGMLQRWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKQRQVPPDILPKLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQSV-SNVLPSKRV 339          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: A0A6U3R6S4_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R6S4_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.660e-60
Identity = 158/444 (35.59%), Postives = 215/444 (48.42%), Query Frame = 0
Query:    1 MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAVRLEKEERVKNQTDLIRLRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEVPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEME---RNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            MD LKAE+ERK++R  EL+     + G ++F RR +    E+ ER   + D  + R                                                              ++P  E K RLR +   +T FGET A+R ARL   E +    ++DF ++ GH+  N FL     D   + LD                 D   XXXXXX   A +++ ++A     G  G A   +                           V  E K     KE +    ++L++ +F+GL + WEMDLN R + VKRT QGK+ETKTQKQ KDY+RPLFKLCK+K +P  IL NL  ++   ++GEFV AND Y+ TAIGN+ WPIG+T+VGIH+RS  + +    VAH+MNNE QRKYL SVKRL+ Y Q +R D+APSKKV
Sbjct:    1 MDALKAEIERKRKRKEELLPHLASDTGPKKFFRRCDLEAAEQRERETKRQDFEKTRALNVRQHDENRRGGAELNEQLLRRKGQSTSRSNLGDPAASAQDNGRDDPPLM----------DLPIDEVKIRLRDMNQVVTYFGETDAERLARLRKIEVEGVDQENDFAISGGHDTRNVFL---DQDSRSNALD-----------------DXXXXXXXXXTPKASSKSGKRAPNFTSGMDGKALSTELALIDETPKKKPNKQER----------VALEEKERAATKEQQVVNDHRLIKDYFKGLTRSWEMDLNARSEQVKRTAQGKIETKTQKQCKDYIRPLFKLCKKKTVPADILFNLKKIMECCQKGEFVMANDAYIQTAIGNSAWPIGITLVGIHQRSAHDGLQVGKVAHVMNNEMQRKYLQSVKRLIAYEQKRRPDVAPSKKV 404          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: K3WDK4_GLOUD (Pre-mRNA-splicing factor 18 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDK4_GLOUD)

HSP 1 Score: 207 bits (528), Expect = 2.200e-59
Identity = 143/318 (44.97%), Postives = 173/318 (54.40%), Query Frame = 0
Query:  124 EAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            E K RLR L  PITLFGET  +R  RL  AE D    Q+D  L +GH   N F+G    +                   D E  DD+ XXXXXXXXX           T         DGD                                      ++ + +KLV  FF+ +L+ WE DL  RPDHVKRT QGK+  KT KQ KDY+RPLFKLCKQ+ +P  IL NLV ++ F K+GEFV AND Y+  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNEA RKYL SVKRL++Y Q   ++  PSKKV
Sbjct:  113 EMKKRLRDLGQPITLFGETDRERMDRLRRAEHDVAFRQED-ELGEGHRTRNRFVGEKEQE-------------------DAEHADDAAXXXXXXXXXXXXXXXXXXXXTQMAAKSNTADGD--------------------------------------EDSDEDKLVYRFFKTMLQSWERDLANRPDHVKRTAQGKIAMKTMKQCKDYIRPLFKLCKQRQVPSDILPNLVEIVKFCKQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNEAARKYLTSVKRLISYAQSI-SNALPSKKV 371          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: D0NFF0_PHYIT (Pre-mRNA-splicing factor 18 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFF0_PHYIT)

HSP 1 Score: 205 bits (522), Expect = 9.060e-59
Identity = 134/318 (42.14%), Postives = 175/318 (55.03%), Query Frame = 0
Query:  124 EAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPTAGDREKGDDSDXXXXXXXXXAGTRAARQATRTAKGRGGGAQDGDSGXXXXXXXXXXXXXXXXXXXXXXXXGVGDEAKLDGEVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            + + RLR L  PITLFGE+   R  RL  AE D    + +  L  GH++ N F+G     + G   D A     +  A D E+ D +D                            A+DG                           G G+E     E +E + +K+V  FF+G+L+ WE DL  RPDHVKRT QGK+  KT KQ KDY+RPLFKLCK + +P  IL  LV ++ F ++GEFV AND Y+  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNE+QRKYL SVKRLM+Y Q   +++ PSK+V
Sbjct:   94 DLRRRLRELGEPITLFGESMKDRMTRLRRAEMDAVT-KHEVELGAGHDIRNRFVGGDGG-VHGDQKDTA-----DDAAEDAEEFDIADT---------------------------AEDGGKSKT----------------------GGGNE-----EDEEKDADKMVYRFFKGMLQRWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPSDILPILVEIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQSI-SNVLPSKRV 349          
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Match: A0A7S3HBW2_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBW2_9STRA)

HSP 1 Score: 206 bits (525), Expect = 9.810e-59
Identity = 102/161 (63.35%), Postives = 124/161 (77.02%), Query Frame = 0
Query:  281 EVKEMERNKLVRTFFRGLLKEWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 441
            +++ +   K+V  FFR L K+WE DLN R D  KRT  GK ETKTQKQ KDY+RPLF++CK+K +P  IL+ LV M+   +EG F+ AND Y+ TAIGN+ WPIGLTMVGIHERSGRE+IS+  VAHIMNNE QRKYL S+KRLMTY Q KRTD+APS K+
Sbjct:  228 KIEGLSMEKIVYKFFRALTKQWEADLNQREDWAKRTAAGKKETKTQKQCKDYIRPLFRMCKKKEVPFDILDKLVLMVKHCEEGNFLAANDQYIRTAIGNSAWPIGLTMVGIHERSGREKISTSKVAHIMNNELQRKYLTSIKRLMTYAQTKRTDVAPSMKL 388          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP2_ECTSI2.240e-18487.16Pre-mRNA-splicing factor 18 n=2 Tax=Ectocarpus Tax... [more]
A0A836CGW5_9STRA2.230e-7376.16Pre-mRNA-splicing factor 18 n=1 Tax=Tribonema minu... [more]
A0A2D4CCV0_PYTIN2.950e-6344.03Pre-mRNA-splicing factor 18 n=1 Tax=Pythium insidi... [more]
A0A5D6YA39_9STRA1.220e-6144.10Pre-mRNA-splicing factor 18 n=1 Tax=Pythium brassi... [more]
A0A7S2S6W9_9STRA1.130e-6043.76Pre-mRNA-splicing factor 18 n=1 Tax=Rhizochromulin... [more]
H3GWX1_PHYRM2.280e-6041.51Pre-mRNA-splicing factor 18 n=1 Tax=Phytophthora r... [more]
A0A6U3R6S4_9STRA6.660e-6035.59Pre-mRNA-splicing factor 18 n=1 Tax=Dictyocha spec... [more]
K3WDK4_GLOUD2.200e-5944.97Pre-mRNA-splicing factor 18 n=1 Tax=Globisporangiu... [more]
D0NFF0_PHYIT9.060e-5942.14Pre-mRNA-splicing factor 18 n=2 Tax=Phytophthora i... [more]
A0A7S3HBW2_9STRA9.810e-5963.35Pre-mRNA-splicing factor 18 n=1 Tax=Spumella elong... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..83
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableGENE3D1.20.940.10Functional domain of the splicing factor Prp18coord: 272..436
e-value: 1.8E-52
score: 179.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..206
NoneNo IPR availablePANTHERPTHR13007:SF19PRE-MRNA-SPLICING FACTOR 18coord: 1..441
NoneNo IPR availableSUPERFAMILY47938Functional domain of the splicing factor Prp18coord: 287..431
IPR036285PRP4-like superfamilyGENE3D4.10.280.110coord: 92..162
e-value: 2.4E-11
score: 45.0
IPR036285PRP4-like superfamilySUPERFAMILY158230PRP4-likecoord: 110..156
IPR004098Prp18PFAMPF02840Prp18coord: 293..431
e-value: 7.2E-55
score: 185.0
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 126..150
e-value: 9.5E-7
score: 28.3
IPR039979Pre-mRNA-splicing factor 18PANTHERPTHR13007PRE-MRNA SPLICING FACTOR-RELATEDcoord: 1..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:838188..843297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.210.1mRNA_P-littoralis_Contig6.210.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 837975..844269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.210.1 ID=prot_P-littoralis_Contig6.210.1|Name=mRNA_P-littoralis_Contig6.210.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=443bp
MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAVRLEKEERVKNQT
DLIRLRQEKKRKREEEERKKEEEEEQRRKKTSAAVSKQKEQKSDAAKEKE
KAAAVAAEKQAAAAAQEDEVPAKEAKARLRALCLPITLFGETQAQRSARL
LLAEEDKGHHQDDFTLADGHNVNNEFLGNVSADLSGSHLDAATGRDEEPT
AGDREKGDDSDDDDDDDDDDAGTRAARQATRTAKGRGGGAQDGDSGGGSR
GSGDAAGSAAGGGEKGAGEGGVGDEAKLDGEVKEMERNKLVRTFFRGLLK
EWEMDLNVRPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGIL
NNLVTMINFMKEGEFVRANDIYLLTAIGNAPWPIGLTMVGIHERSGRERI
SSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036285PRP4-like_sf
IPR004098Prp18
IPR014906PRP4-like
IPR039979PRPF18