mRNA_P-littoralis_Contig6.201.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig6.201.1
Unique NamemRNA_P-littoralis_Contig6.201.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 1.750e-159
Identity = 252/274 (91.97%), Postives = 265/274 (96.72%), Query Frame = 2 
Query:   68 MRSTCFIAAAAALSCADAFCFTPTRMSSGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSMGLPKPAAIEA 889
            MRSTC IAAAAALSCADAFCF+P RMS GDVLAPFQAG ALKVISGLNKFDADLVSKVARA AAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACV+AGAEMVELGNFDCFYDQ GLTFSA+DVLEMTRKTR LLPT PLSVTVPHTLDLD+QV+LA+ELE LGVD+IQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAIS+AVSIPVMAASGLSD+TAPMAL+AGARGVGVGSAVNKLNSEIGMVAVVRAIAS+MGLPKP+A+EA
Sbjct:    1 MRSTCVIAAAAALSCADAFCFSPARMS-GDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQ-GLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVSIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPKPSAVEA 272
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA)

HSP 1 Score: 308 bits (788), Expect = 4.440e-97
Identity = 165/258 (63.95%), Postives = 207/258 (80.23%), Query Frame = 2 
Query:  149 SGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVS-NVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSMGLPKPAAIEAVPAPVEEKAT 919
            SGD +APF+A  ALK+ISG+  FD++LV KVA A  AGG TH+DIA DP+LV+ AK  + +V +CVSA++PEL   CVEAGA+MVELGNFD FYDQ G+ F+ADDV+ MT+ TR LLP  PLSVT+PH L +D+QV LA  L+ LGVD+IQTEGK+SLDPS GG+QG IERAAP LAA +AI+RAV IPVM +SG+S++TA MAL+AGA GVGVGSAVNKLN+++ M+AVVRA+A +M LP PA +     PVE+KA+
Sbjct:   24 SGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQ-GMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAPATM-----PVEQKAS 275
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: L1K0A3_GUITC (Uncharacterized protein ycf23 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0A3_GUITC)

HSP 1 Score: 272 bits (696), Expect = 8.140e-84
Identity = 152/240 (63.33%), Postives = 185/240 (77.08%), Query Frame = 2 
Query:  143 MSSGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELL-PTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSM 859
            MS GDV+ PF+   ALK+ISGLN FD   V+ V RA  AGG T +DIACDP LV+ A+++ NVPVCVS+V  E F A V+AGA MVE+GN+D FY  QG  FSA++VL +T +TR++L  +IP+SVTVPHTL LDEQV+LA+ LE+ G  IIQTEG   + PS GGIQG IE+AAPTLAA  AIS+AV IP MAASG+S ITAP+A++AGA GVGVGSAVNKLNSEI M+A VR I  +M
Sbjct:    1 MSKGDVMLPFEQRRALKIISGLNNFDEKSVASVVRAANAGGATLVDIACDPKLVQLARSIGNVPVCVSSVVAEDFLAAVKAGANMVEIGNYDSFY-AQGRKFSAEEVLAITERTRDILGSSIPVSVTVPHTLPLDEQVSLALALEAAGASIIQTEGGMPMKPSSGGIQGLIEKAAPTLAATAAISKAVEIPTMAASGISAITAPLAIAAGASGVGVGSAVNKLNSEIAMLAAVREIYEAM 239
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI)

HSP 1 Score: 275 bits (702), Expect = 9.090e-84
Identity = 148/240 (61.67%), Postives = 189/240 (78.75%), Query Frame = 2 
Query:  146 SSGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSMGL 865
            S  DVL PF    A KVI+GL  F+ + V+++  A   GG TH+DIACDP+LV+ A ++++VPVCVSAV+PELF   V AGA MVE+GN+D FY  +G TF A++VL +TR+TR+LLPTIPLSVTVPHTL L +QV+LA  LE+ G DIIQTEG  S  P++ G+ G IE+A+PTLAAA++ISRAVSIPVM ASG+SD+TA MA++AGA GVGVGSA+NKLNS I M+A  RAIA+++GL
Sbjct:   64 SRQDVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLTSVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFY-AEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAPTQAGVAGMIEKASPTLAAAYSISRAVSIPVMCASGISDVTASMAIAAGAAGVGVGSAINKLNSGIAMIAATRAIANALGL 302
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: D8SUW3_SELML (Uncharacterized protein ycf23 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SUW3_SELML)

HSP 1 Score: 271 bits (694), Expect = 9.180e-83
Identity = 147/230 (63.91%), Postives = 179/230 (77.83%), Query Frame = 2 
Query:  176 AGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSMGL 865
            A  A KVI+GLN FD + V+ V  A   GG TH+DIACDP LV  A  ++++P+CVSAVDPE F A V+AGA M+E+GNFD FYD  G  FS+ +VLE+TR+TRELLP I LSVTVPHTL LDEQV LA  LE  G DIIQTEG  +  PSK GI G IE+A PTLAAA++ISRA+++PV+ ASGLS +TAPMA++AGA GVG+GSAVNKLNS++ MVA VR+IA +MGL
Sbjct:   58 AKRAFKVIAGLNNFDRENVADVVVAAEKGGATHVDIACDPQLVELALGLTSLPICVSAVDPEAFVAAVDAGAHMIEIGNFDSFYDS-GRVFSSKEVLELTRRTRELLPHITLSVTVPHTLPLDEQVQLAEALEEEGADIIQTEGGTASTPSKPGITGLIEKATPTLAAAYSISRAITLPVLCASGLSAVTAPMAITAGASGVGIGSAVNKLNSQLAMVATVRSIADAMGL 286
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: A0A7S0QE85_9CRYP (Uncharacterized protein ycf23 n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QE85_9CRYP)

HSP 1 Score: 270 bits (691), Expect = 1.850e-82
Identity = 149/246 (60.57%), Postives = 191/246 (77.64%), Query Frame = 2 
Query:  125 CFTPTRMSSGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELL-PTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSM 859
            C +   +S   VL PFQ  +ALK+ISGL  F++  VS+V +A +AGG TH+DIAC  +LV  A++++++P+CVS+VDP+ F A VEAGA MVE+GN+D FY + G  FSA++VL +TR+TR LL   IPLSVTVPHTL LD+QV+LAIELE+ G DIIQTEG   + PS GG+QG IE+AAPTLAA  AI++AV IP MAASG+S +TAP+AL+AGA GVGVGSA+NKLNS+I MVA VR I  +M
Sbjct:   36 CVSQGSVSPNLVLRPFQDKSALKIISGLKNFNSASVSQVVKAASAGGATHVDIACSAELVNLARSLTDLPICVSSVDPKEFVAAVEAGASMVEIGNYDGFYGE-GRVFSAEEVLRLTRETRALLGDRIPLSVTVPHTLALDQQVSLAIELEAAGADIIQTEGGMPMKPSTGGLQGLIEKAAPTLAATAAIAKAVRIPTMAASGISYLTAPLALAAGAAGVGVGSAINKLNSDIAMVAAVREIKEAM 280
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: D8RYP1_SELML (Uncharacterized protein ycf23 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RYP1_SELML)

HSP 1 Score: 270 bits (691), Expect = 2.550e-82
Identity = 146/230 (63.48%), Postives = 179/230 (77.83%), Query Frame = 2 
Query:  176 AGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSMGL 865
            A  A KVI+GLN FD + V+ V  A   GG TH+DIACDP +V  A  ++++P+CVSAVDPE F A V+AGA M+E+GNFD FYD  G  FS+ +VLE+TR+TRELLP I LSVTVPHTL LDEQV LA  LE  G DIIQTEG  +  PSK GI G IE+A PTLAAA++ISRA+++PV+ ASGLS +TAPMA++AGA GVG+GSAVNKLNS++ MVA VR+IA +MGL
Sbjct:   58 AKRAFKVIAGLNNFDRENVADVVVAAEKGGATHVDIACDPQVVELALGLTSLPICVSAVDPEAFVAAVDAGAHMIEIGNFDSFYDS-GRVFSSKEVLELTRRTRELLPHITLSVTVPHTLPLDEQVQLAEALEEEGADIIQTEGGTASTPSKPGITGLIEKATPTLAAAYSISRAITLPVLCASGLSAVTAPMAITAGASGVGIGSAVNKLNSQLAMVATVRSIADAMGL 286
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: A0A166CRX2_DAUCS (Uncharacterized protein ycf23 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CRX2_DAUCS)

HSP 1 Score: 268 bits (685), Expect = 2.550e-81
Identity = 139/234 (59.40%), Postives = 184/234 (78.63%), Query Frame = 2 
Query:  158 VLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSM 859
            VL  F A  A+K+ISGL  FD D V+ V  A   GG TH+DIACDPDLV+ A +++++P+CVS+VDP  FPA +EAGA MVE+GN+D FY++ G+TFS +++L +TR+T+++LP++ LSVTVPHTL L +Q+ LA +LE  GVD+IQTEG     P+K GI G IE+A PTLAAA++ISRAV IPVM +SGLS +TAPMA++AGA GVGVGSA+NKLN  I M+A VR+IA+S+
Sbjct:   60 VLKDFHAKKAIKIISGLQNFDKDNVASVVTAADKGGATHVDIACDPDLVKLATSLTSLPICVSSVDPAAFPAAIEAGAVMVEIGNYDSFYEK-GVTFSPEEILNLTRETKKILPSVALSVTVPHTLSLPDQIKLAEQLEQEGVDVIQTEGGKYSSPTKSGILGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSAINKLNDVIAMIAEVRSIANSL 292
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: U5DGR7_9CHRO (Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DGR7_9CHRO)

HSP 1 Score: 265 bits (678), Expect = 3.810e-81
Identity = 139/232 (59.91%), Postives = 178/232 (76.72%), Query Frame = 2 
Query:  164 APFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSM 859
            A F   NALK+ISGLN F+ D V+ VARA AAGG T +DIA  P+LVR A+   ++P+C SAV+PE F A V AGA+++E+GNFDCFY  QG  F A++VL +TR TR LLP + LSVTVPH L LD QV LA +L   G D+IQTEG  S  P+ GG+ GAIE+AAPTLAAAH ISRAV +PV+ ASGL+D+TAP+A++AGA G+GVGSAVN+LNS++ MVA VR++ +++
Sbjct:    8 AAFARRNALKIISGLNNFNGDRVAAVARAAAAGGATFVDIAASPELVRRARQACDLPICTSAVEPEAFVAAVAAGADLIEIGNFDCFY-AQGRRFEAEEVLALTRATRALLPQVMLSVTVPHVLPLDAQVQLAEDLVRAGADVIQTEGGTSSQPAHGGVLGAIEKAAPTLAAAHCISRAVDVPVLCASGLTDVTAPLAIAAGAAGIGVGSAVNRLNSKVAMVAAVRSLVAAL 238
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BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Match: A0A0D6ACD4_9CHRO (IMP dehydrogenase/GMP reductase n=1 Tax=Geminocystis sp. NIES-3708 TaxID=1615909 RepID=A0A0D6ACD4_9CHRO)

HSP 1 Score: 265 bits (676), Expect = 7.550e-81
Identity = 143/230 (62.17%), Postives = 175/230 (76.09%), Query Frame = 2 
Query:  170 FQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSVTVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSEIGMVAVVRAIASSM 859
            F    ALKVISGLN FD D V  V +A   GG T +DIA D +L++  + + N+P+CVSAV PEL    VEAGA++VE+GNFD FY  QG+TF+A+DVL +TR+TR LLP I LSVTVPHTL LDEQV LA  L + G DIIQTEG  S +P+  G+ G IE+A+PTLA AHAISRAV +PVM ASGLSD+TAPMA+SAGA G+GVGSAVNKLN +I M+AVVR++  S+
Sbjct:   11 FATKKALKVISGLNNFDVDNVVAVCKAAELGGATFVDIAADVNLIKTVRQLINLPICVSAVKPELLANAVEAGADLVEIGNFDSFY-AQGITFTAEDVLRLTRETRALLPNITLSVTVPHTLPLDEQVELAQALVTQGADIIQTEGGTSSNPNHSGVLGLIEKASPTLATAHAISRAVEVPVMCASGLSDVTAPMAISAGADGIGVGSAVNKLNDQIAMIAVVRSLVESL 239
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP5_ECTSI1.750e-15991.97Uncharacterized protein ycf23 n=2 Tax=Ectocarpus T... [more]
A0A835YK10_9STRA4.440e-9763.95Uncharacterized protein ycf23 n=1 Tax=Tribonema mi... [more]
L1K0A3_GUITC8.140e-8463.33Uncharacterized protein ycf23 n=2 Tax=Guillardia t... [more]
A0A1Y1HWD8_KLENI9.090e-8461.67Uncharacterized protein ycf23 n=1 Tax=Klebsormidiu... [more]
D8SUW3_SELML9.180e-8363.91Uncharacterized protein ycf23 n=2 Tax=Selaginella ... [more]
A0A7S0QE85_9CRYP1.850e-8260.57Uncharacterized protein ycf23 n=1 Tax=Cryptomonas ... [more]
D8RYP1_SELML2.550e-8263.48Uncharacterized protein ycf23 n=2 Tax=Selaginella ... [more]
A0A166CRX2_DAUCS2.550e-8159.40Uncharacterized protein ycf23 n=1 Tax=Daucus carot... [more]
U5DGR7_9CHRO3.810e-8159.91Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=... [more]
A0A0D6ACD4_9CHRO7.550e-8162.17IMP dehydrogenase/GMP reductase n=1 Tax=Geminocyst... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:814715..822551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIP5
PFAMsDUF561
Model size1911
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue2.17e-166
EggNOG OGs28MV1@1|root,2QUDA@2759|Eukaryota
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-27_000540.1
DescriptionProtein of unknown function (DUF561)
Cds size858
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.201.1prot_P-littoralis_Contig6.201.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig6 817281..821565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791239.7947724-UTR-P-littoralis_Contig6:814714..8147581680791239.7947724-UTR-P-littoralis_Contig6:814714..814758Pylaiella littoralis U1_48UTRP-littoralis_Contig6 814715..814758 +
1680791239.8064835-UTR-P-littoralis_Contig6:817257..8172801680791239.8064835-UTR-P-littoralis_Contig6:817257..817280Pylaiella littoralis U1_48UTRP-littoralis_Contig6 817258..817280 +
1680791239.9047182-UTR-P-littoralis_Contig6:821565..8225511680791239.9047182-UTR-P-littoralis_Contig6:821565..822551Pylaiella littoralis U1_48UTRP-littoralis_Contig6 821566..822551 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791239.8176863-CDS-P-littoralis_Contig6:817280..8174061680791239.8176863-CDS-P-littoralis_Contig6:817280..817406Pylaiella littoralis U1_48CDSP-littoralis_Contig6 817281..817406 +
1680791239.827669-CDS-P-littoralis_Contig6:817690..8178311680791239.827669-CDS-P-littoralis_Contig6:817690..817831Pylaiella littoralis U1_48CDSP-littoralis_Contig6 817691..817831 +
1680791239.8416262-CDS-P-littoralis_Contig6:818209..8183081680791239.8416262-CDS-P-littoralis_Contig6:818209..818308Pylaiella littoralis U1_48CDSP-littoralis_Contig6 818210..818308 +
1680791239.8555484-CDS-P-littoralis_Contig6:818954..8190711680791239.8555484-CDS-P-littoralis_Contig6:818954..819071Pylaiella littoralis U1_48CDSP-littoralis_Contig6 818955..819071 +
1680791239.8669293-CDS-P-littoralis_Contig6:819704..8197841680791239.8669293-CDS-P-littoralis_Contig6:819704..819784Pylaiella littoralis U1_48CDSP-littoralis_Contig6 819705..819784 +
1680791239.8772283-CDS-P-littoralis_Contig6:820912..8210791680791239.8772283-CDS-P-littoralis_Contig6:820912..821079Pylaiella littoralis U1_48CDSP-littoralis_Contig6 820913..821079 +
1680791239.8876793-CDS-P-littoralis_Contig6:821437..8215651680791239.8876793-CDS-P-littoralis_Contig6:821437..821565Pylaiella littoralis U1_48CDSP-littoralis_Contig6 821438..821565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig6.201.1

>prot_P-littoralis_Contig6.201.1 ID=prot_P-littoralis_Contig6.201.1|Name=mRNA_P-littoralis_Contig6.201.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=286bp
MRSTCFIAAAAALSCADAFCFTPTRMSSGDVLAPFQAGNALKVISGLNKF
DADLVSKVARATAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELF
PACVEAGAEMVELGNFDCFYDQQGLTFSADDVLEMTRKTRELLPTIPLSV
TVPHTLDLDEQVNLAIELESLGVDIIQTEGKFSLDPSKGGIQGAIERAAP
TLAAAHAISRAVSIPVMAASGLSDITAPMALSAGARGVGVGSAVNKLNSE
IGMVAVVRAIASSMGLPKPAAIEAVPAPVEEKATA*
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mRNA from alignment at P-littoralis_Contig6:814715..822551+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig6.201.1 ID=mRNA_P-littoralis_Contig6.201.1|Name=mRNA_P-littoralis_Contig6.201.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7837bp|location=Sequence derived from alignment at P-littoralis_Contig6:814715..822551+ (Pylaiella littoralis U1_48)
CCGGACCCCTCGCCACTCACTCTCTGTCTCTATCTCGGTACCAGGTAAGG
TATTGCTGCTCGACTCGGTGCGTAGTATGTCATGCGCGTAGTCCTTCTTC
ATCGTTGTGCATCATGAACTTTCGATCGCCAGGTCACGTCAGCAGCCCAC
CATGTTGCACTTCACACACGTACATCTGCAGCTCTCAGCACTGCTGTCGA
GACTACAACACATATGCTGCCAAGCTAACATTATCGCACCCACCCCTCGT
TGGCGGCCTTGGGTGTCATACCCTAGACAAGCGCCAACCATACACAGCAG
CTCCCATATCATATCGTATTATTGGGTAAAACTCTGAAATGTCACTTTAA
CGAATCTTGACATCTTTTTTTGGAAGGTCTCCTGTACAGTCGTCCCCGCT
TTAAGGACACTAATCTTAAGGAAACTCCCCGCTATAAGGATACATTTTTT
TCCCAGAACATGGTGCCCCGCAGATATACAATAATAGGGGGTACCTTTTC
CACTACGCGGGCCCCCATTTTTTTGCGGGGCAGCACACCTGTACAGCAGT
ACATATAGCATCGACAGCGGTCTGCTGCAGCCCGCACTACTGCGTGTGGG
TATGGAGAGATTCCTCCCATCTGCTGGCGTGATGTTCACCGTGAGGATGA
CGCCTTGACAATAATAAAAGCCTGCAGCAACACCAGCGCACTGCCGCACA
TTACAATCGATCGTGCTGCAGTATTGGAGTACTACAGCCGTAGTGTGGCG
GCCTTCCAACGCGTGTTGTCGTAGTTTAAAGCAACACAGCAGCACAGCAG
TAGTTTCGTGGTCGCATTCCTGCTTCAAATGCGCGTATTTTGACACATGT
TACACCTCCATTGGCCCCGGGGATGGTGAGTTAGTGGCCCCGGAATCTTA
AGGACACTTCCCCGCGTTAAGGACACTCCAAAAAAAAAAACGCGGTGTGT
CCTTAAAGCGGGGTCGACTGTACTTACTCCTGTATTTCTAGTTACCGGTT
ACCCCAGGACGGGAGCACCACACTCTTCCGTTCTTTGCGTGGCACCCGTT
GCCACCTTAACAAGCGGCAAACTTTTCAGCGCCCTAAAGTGTTCGGGAGA
CAAGTGGCGTCAGGAAGTGTCGTTGTCTAACCATTACCTTTTTCCGCGAC
ACCTTTACTGCTCTAGGGTACTGCTGTCCTCGTATTAACGTTCTCGAAAG
ACATACCAGGTACTCCGGAGTATATTCTTTCATGGTTGCGAAACATGCAC
CACTGCCGTTCCACGGCGCAGTTGGTGTAGCAGGCGCACTTTCTAAGAGC
GGGGATTAACGGAAGGCCAAAAAAAACGAAATAGCGGAAACAAAAACGAC
ATAACTTCGTTCTTCTGGAAAAAAAAAAAAAACTCCATTTCGGTATTAAC
GCGTTTCTGCTGCGAGGAGCTGGAGCAGCGGAATAGAGGAGATAACGCCA
AAAATGATGTAAACCCAGAACGCGCGGGGCCCAATTGCAAATAACGCGGT
GGAATGCATCGTGTCAGCGTGTGGGTATAGTAGACGGCCGTGTGCTGTCT
GTTGCACTGACTGGCGGGTATGACGGCTCGGCGCTGTCTGCTGCGCTGCT
GTAGTGTGTGGATAGGGCCTCGCTCTGTTCGGGTTGGTGCCTGTTGCACC
GCCGTGTACCGCAGTCGCAGTCTGTGTGAAGGAGTTCGCTGCCTGGGAGG
CTCATGGGCAAGCCTCCCAGGTTACCAAACTCCATGCATTTCGTTTTCGT
TTTCGCAAAAAAAAAGGTCCGAAACACTTTATTTTTGCGAAATCGAAAAC
GAAGGAACGCCTCCCCGGAGGACGTTGAAACGAAAACACGCCTCTTTCGT
TTTTTTTTCCCGACCAATCAGAGCCCAATTTCGTTTTCGTTTTTGCTATT
TCGTTTTTTTGGCCTTCCGTTAATACGGGCTCTAAGCCAAGAAACATAGG
CTAGCACAAGGTGTTTTTTTCCCAGTCGGTGAAATGCCGCCCTCGTTGTT
TCGTGTGTGCGATCGGATGATATCCATGACATCGCTGACATATCATAAAA
TATGATACCCGCGACCAATATTTGTGGGTACAGCAAGTAGTACATATTGG
AGTTTGAGATAATACACACATAAGCAAATGCATGTGGCCATGCACTCCGT
CCACCATCTCCAGGCTATTATCAGTACTCTGGCTACCCGTGATGTGCATG
GGGCTGTCGTCGGCCGAAAGCTGAACATGCTGTCAAAAATAACGTGACGA
CTATGTTGCACTGGAGCCTCCCTCCGTGTGTGAACCTGAATCCGTTTCCT
GGTGCCCCCATTGCGCCAGTATCGACAAATATCCCTTGCCGCTTTCGCGC
GTCTTGCCGAAGCAGCACTTGTACTTCTGCTGAACACCAATTTTGCTGCC
TTTTTCGCGCGCAGAATAACGCCTCCGTAGAAAAACGCCCCCGTGTTCGA
AACCCAGACCATATCCTATGTTGTGTCGGTCGGCACCCCCCATTCACAAA
CGTATTGTCTGTGTCTGTCGCGCGTGCGGTAAAACATCAACAGCAGTATC
AACAGAACCAGAAGCCATGAGATCGACCTGTTTCATTGCCGCGGCCGCAG
CTCTCTCCTGTGCGGATGCCTTTTGCTTCACGCCGACGAGGATGTCTTCG
GGCGACGTTCTGGCGCCGTTCCAAGCTGGCAACGCCCTCAAGGTATGTGG
AACACCCCGAAGTGCCACACTCGTGGACGTCGAAAATAATGTTGCCGAAA
AAGAGCAGGCTGCAACCTTAAACTTGCTGAAAGAAAAGGCTGGGAGGGGC
GGGGTTGACGCTGATGCGCACACATCATTGACGGCGAGAGTTCACATCCC
GCCGCAAGTCCCATTCGTTTTGCAACGCGTGTTTTTCTCTGATCCTTGTA
GCGCACCAATGATGAATGCCATTGCCCGACAAGTCCGCCGGTCGCCGCTC
ATATGTACAAAATATTACAATCTAAGGTGATTTCCGGACTCAACAAGTTC
GACGCTGACCTGGTGTCCAAGGTGGCCAGGGCGACCGCCGCGGGCGGGGG
CACCCACATCGACATCGCGTGCGATCCCGACCTCGTGCGGGCGGCCAAGG
CCGTGTCCAATGTGCCGGTGAGGTCGTACAGCAGTCTGATACAGCAGAGA
CTGTCGGGTGTTTTCTGCTGACTTTTTCACGTGAAGATGTACACCGGGAA
ACGTTTGTTTCTCACACTCCCGCTGCGTATGTTTGTGTGCGTGTGCGCGT
TCGTATGTTTCCACCACATGTCGACCAGATCGCTATTTTCTATTTTCCCA
CAATTTTACTGCTGGAGGTCGACAGTACCGTGTCGACAGTACCGTGTTCA
AAGCACATTTGGGAGCAACGAGTGCTCAATCGTACTGAATATCCATTCCG
TGCCTCAAGCTTTCTGGTTGCTGCTGCTGCTGCTGCTGCAAACTCTGGAG
TCGTTGTCTCGTAACACGCCGCGTTTCTTTGCCGATGGAATGAAGGTGTG
CGTGTCGGCAGTGGACCCCGAGTTGTTCCCCGCTTGCGTCGAGGCAGGCG
CGGAGATGGTGGAACTCGGAAACTTCGACTGCTTCTACGACCAGGTAAAG
TATGTGGTCCGATGGGCTATCTGTTGTTCAAGATGCTCACTACTCGTACA
TGGCTGCAGTACCGTTCTGTTGTTCAAGATGCTCACCACTCGTACGTGGC
TGCAGTACCGTACACATCACCAGCTTTGCTGATATCACCTACTAGCAGTG
TGAAGAGATGCAGCACTCCACACCGTTGTACCTTTGGTGGGTCTGACACA
CGGCAGCCGCAACAGGCTTGAGTGCATTATTCCTCTATTTTCAAGCGAAA
ACGCGTCAGTGCTTGTTCTGTCGTATGTGCATGTGTCGTATGCAATGGAC
GACACCCCATAAAAAACGCCACAACTGGTCTGCCTGCTGTCCCCGACCTG
CGCGTAGGACGTGCAGTAGTTGTTTCGAGCGGAGAGTTTTAGTTTTTCCC
TACAAGCACGAATGAGAGCGCTCTTTCAACAAACACTGCTCTTGCACCTG
CACAACACTATTGTTAACCTCGTGTTCTTAGGTCGCACTTCGTAGTTTGT
TTGCTTGTCTACGCTTCGAGTGTTCTTACATACTCTCCTACCAGACGCCC
ACCCCGTTGTGGATGAGGCGTGCATGTACGTGTGGGTGCGGCAAAATTGG
CAACCTCTCGAGTGTTTTGTCCAATATCATGAACAACAAGCAGGGGCTGA
CCTTCTCAGCTGACGACGTGCTGGAGATGACCCGCAAGACCAGGGAATTG
CTGCCGACCATCCCGCTCTCCGTCACCGTGCCGCACACCCTGGACCTCGA
CGAGCAGGTCAGAGAACGGTAGTGGCGTTGACGTGTGTGGCGTCAAACAA
TTTATTGTCACCACACCAGTTGAGTACCTTGATTTTAATGAAGAGAAGAA
CTAATACAACAACAGCGTGCCGCCAGCAGCGCTAGTGAAGATGCTTTGTC
TGTGGCCTAAGCGACCTGCCACGCCGGTTTCGCAAAAACTTCCATCGCTC
CTGGTATAGCAGTACACCAGACGAATGTCGAATGTACCTTCTTCGAGGAG
TGCCAACGTGCCAACCCACTTATTGACCAGCGCTGACTGAGTCGGCTTAG
AGTCAGGCTGACTGAGTCGGCTTAGAGTCAGGCTGACTGAGTCGGCTTAG
AGTCAGGCTGACTGAGTCGGCTTAGAGTCAGGTTGACTGAGTCGGCTTAG
AGTCAGGACCTCTCCACAGGTTTCTCTGCCGTGTTTGGTATGATATTTAC
CCCGTCTCAGCATGTTCGGATAAATATCGTTTGTGTGTACATGCGACCGT
AGCAGTCTTGACGTGCTCAAGATTCGTACGTACACACAGTAGTATGTCCA
GCTGATTCCGCCGCTCTTTCTGCACATCTTACGAGTACACGCTTTGCGTT
TTTTGGAACTCTTCCCCTGATGGTTTCGGTGTAATCGCAGGTCAACCTGG
CAATAGAACTGGAGAGTCTCGGTGTGGACATCATTCAGACGGAGGGGAAG
TTCAGCCTCGACCCTTCCAAGTAAGCGGGGGCCGATACTTTGTGTCGTGT
CACATCACACGGACCAGCAGTTGCCACTCAGTATGGTATCATCCATATTT
CATACGAAGGACTTCGTAGGATATTTTGGTCACATGTGCGTTCTCCGCTT
CCGACCACAAGCATTGAACGCGTTGCTTCTCTAGCTGCTTTATACATTTC
GCGGCAGCAGGACTACAGCAGCGGCCCACACCACGCCTGTTTTGCGCGGG
CTCACGCATGCACGCATACCGCGAGGTCGCGCGTGCAAAACTCGCGCGTT
GGCACCTTATTCCGTATCCACAATGGGGCACTGTTTGGAAAACAACTCAG
TCCAAGCGAGCACTTCCGTCTATCGTACGCGGGGGGTATGAGCGGCGTCG
CTTCCCTTCGACTCGCTCGAGGAGAAAGGTCAACGACCGACGGTTTCGGG
AAGGAATTGGTTAAAGCTAAAACAGTTTATACCGCAACGTGGTGCAGTAT
TTTGGGCCAACTGCATTCTCGGGCAGAAAGGCGTTGAGGCGGAAGTTGTG
TGGAGCCGCGAAATGGTCGAAAAGGAAGTGAATCCGCCCATGCATGACCT
TCTGTTTTGCATTTTCAGGCTTATCCTTTCCTGTCCGAGTTTTATTTCAT
CTTTCAACCATCGGTCGAGAGAGCGTGCCGGATACAAACTCAATGGAATA
ATTTGCTCGCGTAACTGCTGTATGTACGTAAATACAAACATGCATCCATA
TACATACGCACACCTGGTTTTTATCATACATGCATGCCTATGCATACACA
TGCTTTCCGAGCCGTCTAAATAATGGTGTCTTCTTGCTGCTGTACCTCTG
CATATCGTCGATGGCGTTTTTACTTCTCCCCCTGTTCTTCACGGCTTCCT
TTTTTTCTCTCTTTCCCTGATTGTTTCTTCCATGACAACAGTACTTCACA
CTTACTGAGAAAAGCTGAAGCAGTAGCATAGATCGGACACCGTGTCTCGT
TCACTTCTGTGTGCGTTTCATTCTCAGTCTAATCATGCCGGAATTTACCA
TGTTTCGGAGGAAATATGTCCGGCTCAGGTCTCTCGAAAAACATTTCTCA
CAATTTTGCCTGTCCCGTACTGCATTTTTCATGTTCCTTCATGTTCAGGG
GTGGAATCCAGGGAGCGATCGAGCGCGCGGCGCCTACGCTAGCCGCTGCC
CACGCCATCTCCAGGGCGGTTTCCATCCCCGTCATGGCAGCCTCCGGCCT
GAGCGACATCACCGCGCCCATGGCCCTGTCCGCAGGGGCCCGCGGTGTTG
GTGTTGGATCCGCCGGTACGAAGGAATGGTTGATTTGCTATCTATATACA
CGTGGAACACTAGAGACTGTGAAAGATCGGCGAATACACTTTAACTTCAA
GTACCTTTAGTTTAGAATAGCGCAGACGTATCGTACGCTGAAGATCTTCT
TTGTTGCGCTTGGGATGTAAGATAGCTTTAGCATATACTTGTATCTACGC
GTATCTGGAGCGTACTTACGGCGAGCAACTGGGACTTGTGTAATATTCTC
AATAGAGGTTGGTTGTCTGATTATCTCCCTGTCTCCTTCCCTCTCTCTCC
CCCCCTCCCCTCCCCTCCCCTCCTTTCATATTTGCTGCACCCCTCTCTCT
CTCTTCGGTGCCGTCCGCATCAGTCAACAAGCTCAACAGCGAGATCGGAA
TGGTAGCCGTGGTGCGGGCAATCGCGTCGTCGATGGGGCTCCCCAAGCCG
GCTGCGATAGAGGCTGTTCCAGCTCCTGTGGAGGAGAAGGCGACCGCCTA
GACTCCGGGAAGTAGTCCGTCTGCTGGCAGCGCAGGCTTACCTTTTCTCC
CGGAACCAATGTCCTGCTTGGCATGAAGGCTTCAAGTGCCCTTTGTGGGG
CCCGTCCACGAGATGTTTTCGACAACGTTCCCCAATATCAACATTTTTAT
TAGAATAGCTCCGTTCCCCACATATTGCTTCAGGACCAGGATGTGTGTTT
GAGGCTCGAGGCTGGGTGTAAGCACATCAGAGTGGGTGGGTAGTTCCCCC
CAACGGAGTAGAATTGAAATACCTGGGGTGATGACCCAAAGCAGCCGACC
ACGTCTGTACAATTGGTTGACGCGTGGTAATATACGGCGGCTGTTTTGTC
GTTGCGATTTGTAGGTCACAGATAATTGCTGATTGGTATTTTTGAAACAC
AGGCAGATGAGACAAAATAATACTACAGTATTTGTTTGTTCTTGCTCGAG
AGGTCAGAGCATTATTCTTAGTGAGGCCCGGTCTCTTGAGCCAACTATCG
CTATCGTGCCTCGTGTTGTTCTCCCAGTGTTGGCTAGCTGAAGTGTTTGC
TGTCTTAAGATGGGAATACTTCGTAAATGTTTGGGATGAAAGCATTCGAT
TTCCACACCGTCTCTATCGTGGTTTGAGATATGGGAATGAGGTACTTCGT
ACGAAGTATGGTTTAATATTTGGGATGCATTCAATCTGGCTCATCTTGTC
TATCGTGCAACCTTCTTCTGCTGCCGGATTTTACGGAGAAGAAACCGAGC
TTCGAGTGACGACGCTGCTGTCTTCGTGTTTGCTCTCTCAAACAAAACCA
ACTGCGAAGTAATTACTTTCCGTAGTTGTTGAATTTTCGTGAAGCCTCAC
GCCTTAACGAGGCGAGTTCCGCCCAATCAGGGAATGCTTTTGAATGCTTC
CTCCCCAGCCACCCGCGCTAGACGAAATCCTTCTTTTTTGTCAAGAAAAC
AACTAGATTTATCACGCGCCCGCTCGTGTGTCCCTGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig6:814715..822551+

>mRNA_P-littoralis_Contig6.201.1 ID=mRNA_P-littoralis_Contig6.201.1|Name=mRNA_P-littoralis_Contig6.201.1|organism=Pylaiella littoralis U1_48|type=CDS|length=858bp|location=Sequence derived from alignment at P-littoralis_Contig6:814715..822551+ (Pylaiella littoralis U1_48)
ATGAGATCGACCTGTTTCATTGCCGCGGCCGCAGCTCTCTCCTGTGCGGA
TGCCTTTTGCTTCACGCCGACGAGGATGTCTTCGGGCGACGTTCTGGCGC
CGTTCCAAGCTGGCAACGCCCTCAAGGTGATTTCCGGACTCAACAAGTTC
GACGCTGACCTGGTGTCCAAGGTGGCCAGGGCGACCGCCGCGGGCGGGGG
CACCCACATCGACATCGCGTGCGATCCCGACCTCGTGCGGGCGGCCAAGG
CCGTGTCCAATGTGCCGGTGTGCGTGTCGGCAGTGGACCCCGAGTTGTTC
CCCGCTTGCGTCGAGGCAGGCGCGGAGATGGTGGAACTCGGAAACTTCGA
CTGCTTCTACGACCAGCAGGGGCTGACCTTCTCAGCTGACGACGTGCTGG
AGATGACCCGCAAGACCAGGGAATTGCTGCCGACCATCCCGCTCTCCGTC
ACCGTGCCGCACACCCTGGACCTCGACGAGCAGGTCAACCTGGCAATAGA
ACTGGAGAGTCTCGGTGTGGACATCATTCAGACGGAGGGGAAGTTCAGCC
TCGACCCTTCCAAGGGTGGAATCCAGGGAGCGATCGAGCGCGCGGCGCCT
ACGCTAGCCGCTGCCCACGCCATCTCCAGGGCGGTTTCCATCCCCGTCAT
GGCAGCCTCCGGCCTGAGCGACATCACCGCGCCCATGGCCCTGTCCGCAG
GGGCCCGCGGTGTTGGTGTTGGATCCGCCGTCAACAAGCTCAACAGCGAG
ATCGGAATGGTAGCCGTGGTGCGGGCAATCGCGTCGTCGATGGGGCTCCC
CAAGCCGGCTGCGATAGAGGCTGTTCCAGCTCCTGTGGAGGAGAAGGCGA
CCGCCTAG
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