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Homology
BLAST of mRNA_P-littoralis_Contig6.177.5 vs. uniprot
Match: D7FIP9_ECTSI (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP9_ECTSI) HSP 1 Score: 322 bits (826), Expect = 3.640e-97 Identity = 181/269 (67.29%), Postives = 214/269 (79.55%), Query Frame = 2
Query: 2819 PTKFLMTLHDMLVAGNPRFWWERETGSVVVEDPQLFEAEMMPLYFADPKVSGFLRQLSCYGFKKAGRSLKEQGRYQHSECRWKDVSCVKSLMTKKAHDQRRLEKAIRNTPAGAAGAAGSAEWTCGNAGVKPGLSSRGGSSSSSVEHGDENGEEAEAERTELEIATEAAVVRGKGVGRQARKELRESMSRSKVGRYQLEQMAKLMMEVMRLNSKLVKGLKECRRRGGPPRIRRRCKVNSPAVAKLRLEHARLRRRVRQLEEQVVDRGMPL 3625
PTKFL L+DMLV GNP+ WWERETGSVV+EDPQLFEAE MP +F DPKVSGFLRQL+ YGFKK GRS+KEQGRYQH ECRWKDVSCVKSL+TKKA+D RRLEKAIRNT A AG GS CG+ G S +V G+E G+ AE ERTELE+A EA VVRGK VGRQ RKELR+ MSRS++G +Q+EQ AKLMM++MRLN+KL +GL++CR RGGPP + RR +NSPA+AK+RLE+ARLRRRVR+LE++ RG+PL
Sbjct: 67 PTKFLSILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPRFFTDPKVSGFLRQLAFYGFKKPGRSVKEQGRYQHPECRWKDVSCVKSLLTKKAYDLRRLEKAIRNTSA-VAGPDGS---PCGDGGRT--------GSVGAVGQGEE-GDAAEVERTELEVAAEATVVRGKSVGRQVRKELRQMMSRSQLGCWQVEQTAKLMMKIMRLNAKLAEGLRQCRARGGPP-VLRRYNMNSPALAKVRLENARLRRRVRRLEDEAERRGLPL 321
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LLB2 |
| PFAMs | HSF_DNA-bind |
| Model size | 3652 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K09414,ko:K09419 |
| KEGG Pathway | ko04212,ko05134,map04212,map05134 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Evalue | 8.57e-07 |
| EggNOG OGs | COG5169@1|root,KOG0627@2759|Eukaryota |
| Ec32 ortholog description | Heat Shock transcription factor |
| Ec32 ortholog | Ec-27_000590.1 |
| Description | sequence-specific DNA binding |
| Cds size | 3309 |
| COG category | K |
| BRITE | ko00000,ko00001,ko03000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791238.8077154-CDS-P-littoralis_Contig6:712384..712523 | 1680791238.8077154-CDS-P-littoralis_Contig6:712384..712523 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 712385..712523 - |
| 1680791238.8203013-CDS-P-littoralis_Contig6:713752..713881 | 1680791238.8203013-CDS-P-littoralis_Contig6:713752..713881 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 713753..713881 - |
| 1680791238.8295357-CDS-P-littoralis_Contig6:714393..714767 | 1680791238.8295357-CDS-P-littoralis_Contig6:714393..714767 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 714394..714767 - |
| 1680791238.8421087-CDS-P-littoralis_Contig6:715520..715595 | 1680791238.8421087-CDS-P-littoralis_Contig6:715520..715595 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 715521..715595 - |
| 1680791238.8518853-CDS-P-littoralis_Contig6:716326..716936 | 1680791238.8518853-CDS-P-littoralis_Contig6:716326..716936 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 716327..716936 - |
| 1680791238.860887-CDS-P-littoralis_Contig6:717400..719328 | 1680791238.860887-CDS-P-littoralis_Contig6:717400..719328 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 717401..719328 - |
| 1680791238.8706923-CDS-P-littoralis_Contig6:720101..720155 | 1680791238.8706923-CDS-P-littoralis_Contig6:720101..720155 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 720102..720155 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791238.8801067-UTR-P-littoralis_Contig6:720155..720414 | 1680791238.8801067-UTR-P-littoralis_Contig6:720155..720414 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 720156..720414 - |
| 1680791238.8915095-UTR-P-littoralis_Contig6:723993..724077 | 1680791238.8915095-UTR-P-littoralis_Contig6:723993..724077 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 723994..724077 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.177.5 >prot_P-littoralis_Contig6.177.5 ID=prot_P-littoralis_Contig6.177.5|Name=mRNA_P-littoralis_Contig6.177.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1103bp
MANDGIGTNLHPIFPSPEVRPKPESLALLGPPPPEHYPQQQQQQQQQQHL
QQLHTRQVQQQQQRQHYQHHHGQGQLQHHHHHQQQQSQQQQQQQRQQPAQ
RHILPSLRTSMSFSPALNYGQQSPQPQKHQQQRPGGMPMPGVLSLPPRQS
PQLHPLPFPQHRSVGGLDDRRGGGGGGGGGGGGDGSRGNGGSAGPLSPSG
LGPATSGFYGMGNGRSAGPQQQLDRTLPLPFSAAAAAGGGGGGSGGGSGV
SRGISASSRVGSPLPTRRVGQQQQQQQHQQLHMPAFPNASWPPVVQGFGG
AVPIPQSEQQQQRSTPRQQRSRSPTAWRAASSPTHVAANQGVSGDGSGGV
FKGVEGTATLPVSPGSWVAPQAQRGGGNSISGSGGGGTNFEAGAGQKLTR
HGVHQQQHQQAPFARAGGGGGGGGVMAGGLSPPLLQQVPQQVQALLQQQQ
QQQRQINQQSSTQPPQQQQVGMTTTMNGFTRSVTAGGPWPVNRPHIGGTS
SAPQAALQPNPGYRWPTHQVGSNTRVAQQSHAEHPDALVGGGMMARAFGG
SISSSSSSSGSGGNTNTNTNTSGPVTILSTATGGFVQPPMVGRSPQQQQR
RRVALIAPRHEPPLQQGPPSAAAAAAAVAALNAAAVGAGEGMGTRDWNAL
RTSMWVSHHTSPLLQGVLQSPRQGQQQQQQQQQQQQQQQQQQQQAGNPAS
PRATIQGVTSAVTDASSPPAPRFTPIAPMLSPRQPAGMPPPPPLASSSVQ
AAAGAAGAAPFRGNGVGGSGGRDYGVGAGRGVGGGGGVGMGAGGRTVVDG
GVSSGGGGGVGSGDGGGKSQGRRGAPTKFLMTLHDMLVAGNPRFWWERET
GSVVVEDPQLFEAEMMPLYFADPKVSGFLRQLSCYGFKKAGRSLKEQGRY
QHSECRWKDVSCVKSLMTKKAHDQRRLEKAIRNTPAGAAGAAGSAEWTCG
NAGVKPGLSSRGGSSSSSVEHGDENGEEAEAERTELEIATEAAVVRGKGV
GRQARKELRESMSRSKVGRYQLEQMAKLMMEVMRLNSKLVKGLKECRRRG
GPPRIRRRCKVNSPAVAKLRLEHARLRRRVRQLEEQVVDRGMPLPPHQTE
GV* back to topmRNA from alignment at P-littoralis_Contig6:712385..724077- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig6.177.5 ID=mRNA_P-littoralis_Contig6.177.5|Name=mRNA_P-littoralis_Contig6.177.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=11693bp|location=Sequence derived from alignment at P-littoralis_Contig6:712385..724077- (Pylaiella littoralis U1_48)
ACAACTGGGTACGGTGGTGCCAGTAGCAGGAGGCATGAGTGCGACTGAGG
AGAGCAAGCGTGAACAGGCAGACCTCGTGGCAAGGCATGTTTGCGATTGA
TTGCATGCCTTTTATTTTATTTTTGTCAACCCCCCCCCCCCTCGACTGCC
GGTACTTCCGGTCTTCCCTCTGCACTCTCCATGTATGTATTTTGTCCCTC
TGTCTCTTCTTTTCTTTTCCCTCTCGTTCCCCTGCTTCCTTTTTGTTTGA
CGGCCTGTTTGTCGTGTTTGTGCACGAGTGCACTCCCTCAGTCTTTGTGC
CCTCCCTGTATCTTCTTATTTTTTTATTATTTTGTCTTTCGTCTGTTGAT
CATGTAGTTACTGGACCATGCGCCCTGGTTTACCTTTGCCTTGGTATGTC
ATGGCCCTGGGCCCTGGTTCGATGTACGAAGTACTTCGAAGTACATATGT
GGTTATGGTTGAGGTTTGTCTTGTTTTTTTTTGTTTGAACTGTTTCCAAT
TTTTGTTTTTCTTTCCAACCTGTTATTTCTTTCTCTATTTTGTTTGGTAC
TTTGACCGTAACAGATGGTACCCCAACGGTACCCTATCTGATTTGACTGT
GGGTGATCGTAGTCCATTTTTTTTTTTTTTCCTCCTAGCACGATATGTGC
GTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTGAGCTCATGTGAGA
ACCAACAACAACAACAACTGCAACACTTTTTGTCTTTTTTTGTGTGTGTT
TTCGGATCTTTCTAGGGCTAGCTAGCACTCTTCGGACTCAGAGACTTGTG
GCCATGGGCTGTGTGGTTGCCTTCCGTCTGTGTGACCTTCCGATCTCTCC
TCAATACATTCTCATGTCCGAACTCCTCCGATCATGGACGGTTTCCGTGG
TCACAGGCTGCTTTTTCCTAAAGGGGTATGTAGTAGGCAAGAAATCCCAT
CAATCCACTACAGGTACGTACGACAAGGAAACTCCGGCAAAACAAAAGAT
AAGAGTACGCGGGATAATCTTAGGTACCAGGTACAGTATCGAATAGGGAT
GTATAATACAGACAGGGAAGTTCGACATACAGCAGTATTCCGTGCACACC
TACTTATTATACATGTATAGCTCCCGGAGTATCATACACTCGTCACGTGT
TCCTCTTCGCTCCTTCGAGTGTGTTGGGATGTGTGGGGCAGCCTGCAGAG
AGGGGTGTTGTACTTGTGTCGTTCTATGGTGCAGCTCACCACCTGTTGAC
ACACGCCTTTGGAGAATCGTTGGGATGCCATCGGGTTCCAAATCATCCAC
GGGGTGTTGTCGTACGTCCGAGGCAGCTGGCCTCTCATCGGCGGGATTAT
CTACGAGCTCCTGTTTGCGCGGCTTCTTTTTTGTACTTCGCACGTAGAAT
GCTTCGAGTCATATCATGTGACATGCATACAGCATATACTTTGAAGTATA
TACGATGTTGTGGTAGATGTACCTTATTCTTTGTGTTCGTTGCAATATCT
GCTCCAGATCCTTGTCTGGAGAGAGGCGAACACATTGATGTTTTTTATTA
AAAACTTACCAAAACATCAGTGTGTTCGCCTCTCTCCAGAGAAGGATCCG
GAGCAGATATTGCAACGAACGCAAAGAGTGAAATACGTCTACCGTTTTTG
TAAGTTTAGAATATACCATATATATATACTCCGAAGTATATATATACGAT
ACAAAGCATTCAAGTGAGAATCAACAACAACATTCAAGTACGGCGTACTT
CGTACTCGGAGTATATATATTTGGCCCAATTTTCTGACTACCGTAATCAT
GCGAGTCATCGCACCCCCGTGTAAGCTTTTTTGCATTCCGTACTTCTCCA
CAACCAGGAGAGTACCACTGCCGAAAAGGGTGGTTTTGGAAAGATCTCGT
CAAGAGCTTTCGTATGACGGGTCGTTTGGTGTTCGCACTCTCCTGGTTAT
GGAGCAATACGGAATGCAAAAAAGCTAACACGGGGGTGCGATGACTCGCA
TGATTACGGTACAACATCAATGTGTTCGCCTCTCTCTAGACGAGGATCCA
AAGGAGATCGGCGACAAGCATAAAGACAAATATCGTAATATCACATCATA
CATCTACTTGTGTTTGTACAAAACTCAACACTAATTTCTTCAGTAGAGAA
TCGTTCGGACGTGGTTCACCATCTCAATTGGTAACACGTTTAGCTACCGG
CTTTTTGTCTGTGTACGTACAAAAGCGCACACGTTCTCCGAATATGATAC
CACACTTCCAAGGATAATGTGACACGCCATCGTTTCTTTTTGTTCAGGGC
ACATAAGCCCTCATGTGAACGACAGATGGTAGTGTACACCACGATGGTTG
TTCGTCGAAAAATGCCCCCATGTACACAAACACACACGCTGCTGGTGCTG
TACGTCGACAAATGCCCGTTTACATACACAGAAATACAAAGTACTACTGC
TCTGCATGCGACATGGACACGAACAAGCTACGTATTGCTCTGCTGTTCAC
TGTGCTACTCGGCTTTGACCAGCCTTGCCTGCTCCAACAGGTCTTGATGA
CGCATTATGTGTATGATACACGTACAGCAGTACTACGTGATGTTGTAGCT
TCACAGGGTACATCATTTGGTGTCAAACCAGGTACTGCTGTATACAGTAC
CTCACACTGCTGTATGTATTTTTGTGATATCATAACTAACCAAATCGATC
ACGATGTCAAGCACCAGTTCATCAACGCTGATGTGCCGTCCAGAGATGTT
ACCACCTTGCTGCTGCCGCTGCTGTACTGAGTTGTCTATTTCGGTGTTGC
TACGGCAGCAAGTAGGTGAGCGGTTTGGGGGAGTTTTTTATTTTGGGGGG
GAGGGGGCTGCCTTACAGACATGTACATGGTCGTCAAAATGAAAACGCAC
GCGCGCCTTGAACTTTACAGCAGTGCGGACTCAGAGCCCGTATTAACGGG
GAATTGAAAAAAACGAAATTGCGAAAAAGAAAACGAAAGAACTTTGTTCT
TCTGTAAAAAAAAAAAATTATCGTTGTTGGGTATTAACGCGTTTTTCCAC
AAGGACACCGAGGACCCGAATACGATGAGACAACGCCAAACATGAAGTAC
AAACCCTAGCGCGCGCATAGTTTGCAACGGATGCGGTGTGATGTGCAACA
AACAACACATGACGACAGCAGAAGTTCTCCTGCGAGAGTGTTCCGTGAGC
GAGCGTTCTCTCCTTGCCTATATCGCTGTCGTGTCCTGCTCTTGCTACCT
AGCTATTGCGAGCTGGCTGTTGCGCCGACTTCCTGGTTGCTATGGAGCCT
GGGAGGCTGTTGAATCAAGCCTTCCCGAGCTACGACACTTCGGCATTTCG
TTTTCGTTTCCGCAAAAATAAAGGTCCAAAACACTTTATTTTCGCGAAGA
AAAAAACGAAATACCGCCTGCTCGGTGTGTGCTGAATCGGAGACACGCCT
CTTTCGAAGAAAATAACGCCTCTTTCTCTTTTTTTCTCGGACCAATCAGA
GCCCAATTTCTTATTTTTTTAGCAGTTTCGTTTTTTTCAATTCCCCGTTA
ATCCGGGCCCTCACGACAACACGACCAACCCGTGCGCTTCCCGCGTATCC
CCGACGTCGCCGCTGGTTTGTTCTGTGTTCTACTCGCCCGTCCGCTATGC
ATTTATTTACCAGGTACATACATACATGCGTGTTTGACAGCTGCTCATCA
CTCTTTGCCGTATAGCTTTCTGGCGTGTGGGGGGTTCTGCTGGTCCTTCC
CGTCACCGCGGCTACGCCTCGAGCAGGAAAGTCAAGAGAGCAGCCAGGGG
ATAAGAGGGGCCAAAACTGCAAAAACAAATCGAAAAAAAACGACAAAAAA
AAGTCGTCCAGTGGTATCTTCCGCACTTTGCGGTGTCGTTGGCATTCCAG
AAAAACGAGAGCGAGACGGGCTATGGCGAACGACGGCATCGGCACCAACC
TGCACCCCATCTTCCCCAGCCCCGAGGTAACAAATGTGTCCCATGTATGT
TTGACGTGTTACAATGTCTATCATACAACAGCAGTGCATCGTCCCCCCCC
CCGCCGCCGGCCCTGTCACGTAGCCTGGAACGTGGGGTTCATGGTATCCT
TCCACTTTTCGTGTTCGCGTCATTATCTATCTGGCACAAAGGGACACACA
TTGATCATATGAGTCATGTCGCACCAGCCAGCCAGGAATTCGGGTTCGTT
GGTTCATCTTGAGCTCCAACGGTATTCCAAACCTCGTGGTTGTGTGCACC
ACGACCCGCCGATATTGATATATTGTCGAATCGTTTGCCAAGCTATGCGC
TTTCTATTTTGTGAGTAGGATGCGCGCGGCTTTGTTTTGTTTGCGTCCTG
CGCTACTGCTCTTTGGGGAGGTGAAATTCCGGCAGGAACACTCTCATTGA
GGGTTCCTCTCCTTGACGAGCTGGGCGAAATCGGCTGGTCGTGGGTACAA
ATTTATTTTTGGTAGGGAGTACATTCGTACACCAGACCAAGCGGGTGGGC
TGCGGTTCTGGCTGCCGAACTAGTAGTAAAGTGTAGCTTTCGGTTGTACG
TGCTCTTGCCTGTGCGCGCTGCGAGTCTGATATTCACCTGTGCTTTTGAG
GCCGTCAACGCGCAGCCGAGACAGAAGCAGAAGCAGCAGCATAAGGTGCA
ACAAGTGTCTGTATCGATACCTTAGGTCGCGATGGTGAAATCCGGAACTT
GCTCTGGGCCTCCTTTGACGCCCGCGGCTTATTATTTTGTCATTGCCAGG
TGAGACCGAAGCCCGAGTCGTTGGCCTTGCTCGGACCTCCTCCTCCTGAG
CATTACCCACAACAGCAGCAGCAGCAGCAGCAGCAGCAACATCTCCAGCA
ACTGCACACGCGACAAGTACAGCAGCAACAACAACGGCAACATTACCAAC
ACCACCACGGGCAGGGGCAGCTTCAACATCATCATCATCATCAGCAGCAG
CAGTCCCAGCAGCAACAGCAACAACAACGACAGCAACCGGCGCAGAGGCA
TATTCTGCCCTCCCTCCGCACGTCGATGAGTTTTTCCCCTGCCCTAAACT
ATGGCCAGCAGTCGCCGCAGCCCCAGAAACATCAGCAGCAACGACCAGGC
GGGATGCCAATGCCCGGCGTTCTTTCCCTGCCGCCGCGCCAGTCTCCGCA
ATTGCACCCACTCCCTTTCCCGCAACACCGCAGTGTTGGTGGTCTCGACG
ACCGCCGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGC
AGTAGAGGCAACGGCGGTAGTGCTGGACCCTTGTCGCCAAGCGGCTTGGG
GCCTGCGACGTCGGGGTTCTACGGAATGGGCAACGGGAGAAGCGCCGGCC
CGCAGCAGCAACTCGATCGCACGCTGCCGCTGCCGTTCTCGGCGGCCGCC
GCTGCCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGGAGCGGGGTCTCTAG
GGGAATCAGTGCCTCAAGTAGAGTAGGGTCCCCGCTTCCGACGAGGCGTG
TCGGGCAGCAACAGCAGCAGCAGCAGCATCAGCAGTTGCATATGCCTGCA
TTCCCCAACGCCTCTTGGCCGCCCGTCGTTCAGGGTTTTGGCGGCGCGGT
TCCGATTCCACAATCGGAGCAGCAGCAGCAGCGCTCGACGCCACGGCAGC
AGCGCTCGCGATCCCCGACGGCGTGGCGTGCTGCCTCCTCCCCCACCCAC
GTGGCCGCAAACCAAGGAGTTTCCGGGGATGGTAGTGGGGGGGTGTTCAA
AGGCGTGGAAGGGACAGCAACGCTACCCGTGAGTCCCGGGAGCTGGGTCG
CTCCGCAAGCGCAACGCGGTGGCGGTAACAGCATCAGCGGCAGCGGCGGT
GGCGGGACCAATTTCGAAGCAGGGGCGGGGCAGAAGCTCACAAGGCACGG
GGTGCACCAGCAGCAGCACCAGCAGGCACCATTCGCGCGCGCTGGAGGCG
GTGGGGGCGGTGGCGGCGTTATGGCTGGAGGGCTGTCTCCGCCTTTGCTG
CAGCAGGTACCGCAGCAGGTGCAAGCTTTGCTACAGCAGCAGCAGCAGCA
ACAGCGCCAGATAAACCAGCAGTCATCTACGCAGCCGCCGCAACAACAGC
AGGTGGGCATGACTACTACCATGAATGGGTTTACCCGATCTGTGACCGCG
GGTGGACCCTGGCCAGTAAACCGTCCCCATATCGGCGGCACCAGTAGCGC
TCCCCAGGCAGCACTCCAACCAAACCCAGGGTACCGATGGCCGACCCACC
AGGTTGGTTCCAATACCAGGGTTGCACAACAGTCACACGCTGAGCACCCG
GATGCATTAGTCGGGGGGGGCATGATGGCCCGAGCCTTCGGCGGCAGCAT
AAGCAGCAGCAGCAGCAGCAGCGGCAGCGGCGGCAACACCAACACCAACA
CCAACACCAGCGGACCGGTGACTATTCTAAGTACGGCGACGGGTGGCTTC
GTGCAGCCGCCAATGGTCGGCAGATCGCCGCAGCAGCAGCAGCGGCGGCG
GGTAGCGCTGATAGCTCCTCGTCATGAGCCCCCCTTACAGCAGGGGCCCC
CATCGGCAGCAGCAGCGGCGGCAGCAGTCGCAGCCCTTAACGCGGCGGCG
GTGGGGGCCGGAGAGGGGATGGGCACCCGCGACTGGAACGCCCTCCGCAC
CAGCATGTGGGTATCGCACCACACCAGGTCGGGGTGTAGAGCAGAAGACA
CTCTTTGATTTACCGGTAGTGTGGTTGACTCGAGGCAGGCAAAAGGGCAA
CACAGTGTAACGTTTCTAGCCCAGAACGGTGTCGTCCTCTTTTGTTTGTG
ACAGGGAGGGCCCTCCTGCTCTGCTTGTTTGTCCAATTTCTCTCCCCGAA
AATCGGAGACCCAGCGGAGCGAATGTGCGTTTCAATTGCCGTTTCATTTG
TCAAGCCTTTTTTCGTAGGTCGATTCCTACGAAACCCAGAGGTCGGACTG
GTTTTGTTATCGTTGCCCCCATCAACCGCCCCCTGCCTTCGGAGGTCTAA
TGGGGCTGGCAAGTTCAACCTTCCTCTACAAGCCCCTCTTGTCTCCCGTG
CGTGCGGTTTCTCCTGTGTGACGTACAAGCTCCCCCTTGCTTGTCTTTTC
TTACACCGATTCACTTGTATTTTTTCTTTTCATGTGTCCAGCCCTCTACT
CCAAGGCGTGCTGCAATCGCCACGACAAGGACAGCAGCAACAGCAGCAGC
AGCAGCAGCAGCAACAACAACAGCAGCAACAGCAACAGCAAGCCGGGAAC
CCCGCCTCGCCCCGTGCAACAATACAAGGGGTGACCTCTGCGGTGACCGA
TGCGTCATCACCACCTGCACCTCGCTTCACACCAATCGCCCCGATGCTTT
CCCCTCGGCAACCCGCTGGCATGCCTCCGCCACCCCCCCTAGCATCATCA
TCGGTACAAGCGGCGGCGGGGGCGGCGGGGGCGGCCCCTTTCAGAGGAAA
CGGTGTCGGTGGTAGCGGTGGAAGAGATTACGGTGTCGGTGCCGGTAGAG
GAGTTGGTGGTGGCGGTGGCGTGGGGATGGGGGCAGGAGGAAGGACCGTA
GTCGATGGTGGTGTCAGTAGTGGTGGTGGTGGCGGTGTTGGTAGTGGTGA
TGGAGGCGGTAAAAGTCAGGGCCGCAGGGGGGCCCCGACGAAGTTCTTGA
TGACCTTGCACGACATGCTCGTCGCCGGGAATCCCCGTTTCTGGTGGGAG
CGAGAAACCGGCAGCGTTGTCGTCGAAGATCCTCAATTATTTGAGGCAGA
GGTGAGGCTGTGTTTTGTGTCTTGTTGTCCTTTTTTTATTGGTGGTGTTG
ATGTTGGTTGTTGTTATTGTTATTGTTTTTGTTATTGATTTTGTTTTTGT
TTTTGTTTTTGTTTTTGTTTTTGTTATTGTTATTGTTATTGTTATTGTTA
TTGTTATTGTTATTGTTATTGTTATTGTTATTATTTACCATGTTTTTGGT
GGTGGTGGTGGTGGTGGTGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTGG
TTTTGGTGGTGATGGTGGTGGTGGTGGTGGTACTGTTGTTGTTGTTGTTT
ATTCCTCTACCAAGCAATGTAGTTTGTGCATCACCGATCGTCTTTTGTTG
CGACTTTCTACAGATTCACCGCAACATCTCTTTCGAGCCCCCCTTCGCAG
GAGCACCGGCCGGCTTCTTTCGCCCCATTCTTTGATGCGTATCCCTCAGC
AGTTTCTTCCTTCTTTTTTGCTTCCGAGTGAGAGAGTCGTCCAACATGTT
TTCAAAGTAATTTAGCCCGCAAGTATTGATAGTTGATGTGTTGAGAGAGA
GAGAGAGGGTGGTCCAAGTCATCCATGCGCACGCGCTGGGTGTCAAATGT
TTGCGCCGAATACCGTACTTCGAAGTACACGTTTTCTTTGTTCTTATTAG
CCCTGTGTGTGCTTGCTCTTACTCCATGATACCCCCCCGCCCCCGCCGAT
TCCCCTTCCCGCTCCTCTCCTCGACCAATTAGATGATGCCGCTCTATTTT
GCGGACCCCAAGGTGTCGGGCTTCCTTCGGCAGCTTTCCTGTTACGGCTT
CAAGAAGGTGGGCGGGATGAGAGGACCGACTTCTTTATCACATATAGATT
GAGAAGGGGCCGAGAATGCTTCGGTGTGCCGTCGCTTTTTGAACCCTAGC
AACTGAGAGTCTCGCCCTCGGTGCCACTGCTGTGAAGCTTAAGCTTTATT
TACTATATTTGTTATGTTTCATATCCACCGCTGTAAAGCCTCATCTTACA
GTATTTGTTATTTTCCATATCCTTCCTCCCTACCGCCCTGCAGGTATTTT
CGTTAGACCGCATTGTGTTCCTCTCAAATATTCGCGCAAGCAGTGAATAC
CTGTTGATATGATGCGCTCATGTGCGTGAGGTAATCGGCCCGAGGTTTTC
AGGTGCAAACGGCGCCTGAATTGATTTGTTTTTTGGACGTCAACCTCTCG
TATGCGTGAGATGGACGAGAATGGTTCAGCGAAGATACAGAAGGATGGTG
TACGGGTTGGCGAATACACTCACGAGCCTTATGCGTACTGTGAAACCTCC
CCTAGCAAGGGTGCGTGCGTTTTCTCAGGCGCTTCCAATCCCAAGTTGTA
CATGTACATCTGGTAGATCTGCACGTCTCGCGTAATGTGTGTGGGCGGAG
TTAAATCAAGGCGGAATGATGACAGATACAGCGGCCCCCCAACGGCATAT
CATTTTTGGTATGCATTCGGATCACCCGCCTCCGTCCCCCTTTTGTTGAC
GCCCCTCCTGCGTAAACGCCACCTGCACACCATGTACAACGACGACGGCG
ACGGCGACAGGCGGGTAGGAGCTTGAAAGAGCAGGGGCGGTATCAGCACT
CGGAGTGTCGCTGGAAGGACGTGTCCTGCGTAAAATCCCTCATGACCAAG
AAAGCTCACGACCAGAGGCGGCTCGAGAAAGCCATTCGCAACACCCCAGC
TGGTGCCGCCGGCGCAGCCGGCTCGGCCGAGTGGACTTGCGGCAACGCCG
GGGTCAAGCCAGGCTTGAGTTCACGCGGTGGTAGCAGTAGCAGCTCAGTG
GAACACGGAGACGAGAACGGCGAGGAAGCGGAGGCGGAAAGGACGGAGTT
GGAGATAGCGACGGAGGCAGCGGTCGTGAGGGGGAAGGGAGTGGGGCGAC
AAGCAAGGAAGGAGCTGCGGGAGTCGATGAGCAGGTATGACACCTGAACA
GCTGAAAAAAAACGCGCAAGCAGGCATTCCGGCAAGGGAGGGGGAGGGGC
TGGGGGGGGGAGAGATGAGAGTAGGGTCGGAGATGAAAAAAGCTCTCATT
GTTTTCGTGTTTTTGTGTGTCGGCCGTTGTCTGTCATTCTCTTGGCCCAC
ACCAGTGCGCGATACCTGCTTGTGCTTGCTTGAGCGTGCCGCAGTTTCCG
GCGAAACTTGTTCCCCTTGAAGGGGATGGTAGTCGCGGGGGCAGAGGGCA
GCAGCACAGGCTTGTACGACGTGTAGTATTTTCCCGTCGAGCTGTACTCT
CAGCGTCATGCGGATGCTGCTGCATGAGGCTGGATTTTACTGCCGCGCTT
ATTGCGCTATGCTGTGCGCCCTATCTTCTACTTCGTGTGTTGCACGAAGC
CGAACGTCTTTTCTTCCCATCCTGTGATCGTCCAACGCTCCTGCGTGCGT
CAATTGTTCCCCCCCTGTTTATTCACTGGTGTCGCGTGGGCCGCAGGTCC
AAAGTGGGACGATACCAGCTGGAACAGATGGCAAAGCTGATGATGGAAGT
CATGCGTCTCAACTCCAAGCTGGTGAAGGGGCTCAAGGAGTGCCGTCGAA
GGGGAGGCCCGCCTCGCATCCGCCGGTCAGTGTTTCACCGCGTCAGTGTT
TCGCCGCGTCCGTCCAACATCCGTGTTCCGTTTCATGGCTGTCTGCCTTC
TTGCTTCGCCGTGTGTTCTCTTTGGACCTGCCTGTCTGCCTTTCTGCCTG
CTTGCTGCTTGCTCTGGGCGTCGAGAGTTTCGTGCAAATATCCGTCCTAC
TTGACGTGCTATTTCTGTTCTACCAAATGTTAAGTTGGCTGCGTGCCTCG
TTCAGTGTTGGGAAGTTTTTTTTTTTGTCGTGCCTCATGGGTGGTCGTCT
TAAAACAACGGCCAGTACCGTACATGGGCAGGTGAGATGACTCCTCCCTT
TTTTTGTTTTCCTTTTTTTAAGGGGCGTGCCGATAAAGCCGTTCATGCTC
ACTCACCTCTCCGCCTTCGTCGGACTCGTTGAAGATGATCGTGTCCGTGC
CGCCAGGCACCATCGCGTGATTGTTTATTGTCTTTGCAACTGTTTCACCG
GGCTTGGGGACAAGCTCGTTTCATCCCCACAGGATCGGCAGTTTAATGTG
GCAAGTATTTCGCATGATGTCCGACCGGTCGAAGTAAAATAAAATACGCG
GCATTGTGCTGATTACTGGAGTCATTCTCAATTTTTTGTCGCTCTCGTTC
TTGACAGAAATCAGGAAAGTATCGAACAAAAAACGACCACCTGAGTCTTG
ACTCCGTCGAATGTGTTGGTTGAGTTCGAAACAAAGCCGGGTATTGGTAT
ATCGGTAGGAAAAAAAGCACTCATTAAATACAAGGCAGTTCACGAAAGCA
CATTCCCTGCACAGCTGTCAGCAGGTCAAACGATGTACGAATTCGGGGAA
AATCGCTGTGTACTGATAAGCTCTATCTTCCTGTAGGATCAAAGTCTGCG
TATCATACCTATACTCGTATCATAAACTCCATCTTCATGTAGGGGTCACT
CGGATCGCAGGATCTGAATCAACAGACTGTCGGTTTTCCTTTTTTTGTGT
GTCTCTCAGTTTTTTATTTTATGTTCCCGCCGACATGTCGATGTCGAGCG
TATGTACCCCTTCTTCTCCCGCCGCCTCCGCCCCTCATTAAATTAAGCCC
ACGACAAAGATCGAGACCCAAAAAACGCGCACTTTTTGCCACCCCTCGCG
CTATCGTCAACGACGATGGCGCGTCCGAAACCGAACTCTCTTCTTTGGCA
CGACTCGCGACGAACTCACTTGCTGTTGGCGAACAAATACGTACTTACAT
GTAGCAGGTGCAAGGTCAACAGCCCCGCCGTGGCGAAGCTCCGTCTGGAG
CACGCAAGGTTGAGGCGGCGAGTTCGCCAGCTGGAGGAGCAGGTCGTTGA
CCGGGGGATGCCCCTTCCGCCGCATCAGACAGAGGGAGTCTGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig6:712385..724077- >mRNA_P-littoralis_Contig6.177.5 ID=mRNA_P-littoralis_Contig6.177.5|Name=mRNA_P-littoralis_Contig6.177.5|organism=Pylaiella littoralis U1_48|type=CDS|length=3309bp|location=Sequence derived from alignment at P-littoralis_Contig6:712385..724077- (Pylaiella littoralis U1_48)
ATGGCGAACGACGGCATCGGCACCAACCTGCACCCCATCTTCCCCAGCCC
CGAGGTGAGACCGAAGCCCGAGTCGTTGGCCTTGCTCGGACCTCCTCCTC
CTGAGCATTACCCACAACAGCAGCAGCAGCAGCAGCAGCAGCAACATCTC
CAGCAACTGCACACGCGACAAGTACAGCAGCAACAACAACGGCAACATTA
CCAACACCACCACGGGCAGGGGCAGCTTCAACATCATCATCATCATCAGC
AGCAGCAGTCCCAGCAGCAACAGCAACAACAACGACAGCAACCGGCGCAG
AGGCATATTCTGCCCTCCCTCCGCACGTCGATGAGTTTTTCCCCTGCCCT
AAACTATGGCCAGCAGTCGCCGCAGCCCCAGAAACATCAGCAGCAACGAC
CAGGCGGGATGCCAATGCCCGGCGTTCTTTCCCTGCCGCCGCGCCAGTCT
CCGCAATTGCACCCACTCCCTTTCCCGCAACACCGCAGTGTTGGTGGTCT
CGACGACCGCCGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
ACGGCAGTAGAGGCAACGGCGGTAGTGCTGGACCCTTGTCGCCAAGCGGC
TTGGGGCCTGCGACGTCGGGGTTCTACGGAATGGGCAACGGGAGAAGCGC
CGGCCCGCAGCAGCAACTCGATCGCACGCTGCCGCTGCCGTTCTCGGCGG
CCGCCGCTGCCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGGAGCGGGGTC
TCTAGGGGAATCAGTGCCTCAAGTAGAGTAGGGTCCCCGCTTCCGACGAG
GCGTGTCGGGCAGCAACAGCAGCAGCAGCAGCATCAGCAGTTGCATATGC
CTGCATTCCCCAACGCCTCTTGGCCGCCCGTCGTTCAGGGTTTTGGCGGC
GCGGTTCCGATTCCACAATCGGAGCAGCAGCAGCAGCGCTCGACGCCACG
GCAGCAGCGCTCGCGATCCCCGACGGCGTGGCGTGCTGCCTCCTCCCCCA
CCCACGTGGCCGCAAACCAAGGAGTTTCCGGGGATGGTAGTGGGGGGGTG
TTCAAAGGCGTGGAAGGGACAGCAACGCTACCCGTGAGTCCCGGGAGCTG
GGTCGCTCCGCAAGCGCAACGCGGTGGCGGTAACAGCATCAGCGGCAGCG
GCGGTGGCGGGACCAATTTCGAAGCAGGGGCGGGGCAGAAGCTCACAAGG
CACGGGGTGCACCAGCAGCAGCACCAGCAGGCACCATTCGCGCGCGCTGG
AGGCGGTGGGGGCGGTGGCGGCGTTATGGCTGGAGGGCTGTCTCCGCCTT
TGCTGCAGCAGGTACCGCAGCAGGTGCAAGCTTTGCTACAGCAGCAGCAG
CAGCAACAGCGCCAGATAAACCAGCAGTCATCTACGCAGCCGCCGCAACA
ACAGCAGGTGGGCATGACTACTACCATGAATGGGTTTACCCGATCTGTGA
CCGCGGGTGGACCCTGGCCAGTAAACCGTCCCCATATCGGCGGCACCAGT
AGCGCTCCCCAGGCAGCACTCCAACCAAACCCAGGGTACCGATGGCCGAC
CCACCAGGTTGGTTCCAATACCAGGGTTGCACAACAGTCACACGCTGAGC
ACCCGGATGCATTAGTCGGGGGGGGCATGATGGCCCGAGCCTTCGGCGGC
AGCATAAGCAGCAGCAGCAGCAGCAGCGGCAGCGGCGGCAACACCAACAC
CAACACCAACACCAGCGGACCGGTGACTATTCTAAGTACGGCGACGGGTG
GCTTCGTGCAGCCGCCAATGGTCGGCAGATCGCCGCAGCAGCAGCAGCGG
CGGCGGGTAGCGCTGATAGCTCCTCGTCATGAGCCCCCCTTACAGCAGGG
GCCCCCATCGGCAGCAGCAGCGGCGGCAGCAGTCGCAGCCCTTAACGCGG
CGGCGGTGGGGGCCGGAGAGGGGATGGGCACCCGCGACTGGAACGCCCTC
CGCACCAGCATGTGGGTATCGCACCACACCAGCCCTCTACTCCAAGGCGT
GCTGCAATCGCCACGACAAGGACAGCAGCAACAGCAGCAGCAGCAGCAGC
AGCAACAACAACAGCAGCAACAGCAACAGCAAGCCGGGAACCCCGCCTCG
CCCCGTGCAACAATACAAGGGGTGACCTCTGCGGTGACCGATGCGTCATC
ACCACCTGCACCTCGCTTCACACCAATCGCCCCGATGCTTTCCCCTCGGC
AACCCGCTGGCATGCCTCCGCCACCCCCCCTAGCATCATCATCGGTACAA
GCGGCGGCGGGGGCGGCGGGGGCGGCCCCTTTCAGAGGAAACGGTGTCGG
TGGTAGCGGTGGAAGAGATTACGGTGTCGGTGCCGGTAGAGGAGTTGGTG
GTGGCGGTGGCGTGGGGATGGGGGCAGGAGGAAGGACCGTAGTCGATGGT
GGTGTCAGTAGTGGTGGTGGTGGCGGTGTTGGTAGTGGTGATGGAGGCGG
TAAAAGTCAGGGCCGCAGGGGGGCCCCGACGAAGTTCTTGATGACCTTGC
ACGACATGCTCGTCGCCGGGAATCCCCGTTTCTGGTGGGAGCGAGAAACC
GGCAGCGTTGTCGTCGAAGATCCTCAATTATTTGAGGCAGAGATGATGCC
GCTCTATTTTGCGGACCCCAAGGTGTCGGGCTTCCTTCGGCAGCTTTCCT
GTTACGGCTTCAAGAAGGCGGGTAGGAGCTTGAAAGAGCAGGGGCGGTAT
CAGCACTCGGAGTGTCGCTGGAAGGACGTGTCCTGCGTAAAATCCCTCAT
GACCAAGAAAGCTCACGACCAGAGGCGGCTCGAGAAAGCCATTCGCAACA
CCCCAGCTGGTGCCGCCGGCGCAGCCGGCTCGGCCGAGTGGACTTGCGGC
AACGCCGGGGTCAAGCCAGGCTTGAGTTCACGCGGTGGTAGCAGTAGCAG
CTCAGTGGAACACGGAGACGAGAACGGCGAGGAAGCGGAGGCGGAAAGGA
CGGAGTTGGAGATAGCGACGGAGGCAGCGGTCGTGAGGGGGAAGGGAGTG
GGGCGACAAGCAAGGAAGGAGCTGCGGGAGTCGATGAGCAGGTCCAAAGT
GGGACGATACCAGCTGGAACAGATGGCAAAGCTGATGATGGAAGTCATGC
GTCTCAACTCCAAGCTGGTGAAGGGGCTCAAGGAGTGCCGTCGAAGGGGA
GGCCCGCCTCGCATCCGCCGCAGGTGCAAGGTCAACAGCCCCGCCGTGGC
GAAGCTCCGTCTGGAGCACGCAAGGTTGAGGCGGCGAGTTCGCCAGCTGG
AGGAGCAGGTCGTTGACCGGGGGATGCCCCTTCCGCCGCATCAGACAGAG
GGAGTCTGA back to top
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