mRNA_P-littoralis_Contig6.169.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI) HSP 1 Score: 1098 bits (2840), Expect = 0.000e+0 Identity = 615/881 (69.81%), Postives = 708/881 (80.36%), Query Frame = 2
Query: 959 QKQKVRDASGGRSREMQVDFDSDLGSDY--------DGGQAKLEEEGEEKGQEDGDDLD--GEWLIPTLRNPPFEDPDMRPLVLTNEAGGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGRKERKEHASVAGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKRVLGNLLKRKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFHPDLEVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGG------WDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRNKNKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESMLLKMRREHGGGLPPLVPDTEDGLVMEPVQNIVDIVNNYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARAEGLNQDTELGGVVMQHDDMVAADREEELPPGTQEGNINEVDAMDDEDNHDK 3553
+K+K S G EMQV F D D+ +GGQ + G E+ E DDLD GE L PT+RNPPFEDP RPLVLTNEAGG+RA VPAS NRYL+ YQ+EGVEFM+RRVRH +GPKGV+L DDMGLGKTVQ IAL ALLKKTGT +D+ D++ RK+ K H SVAGK +LIVCPR+VLP+W HL WGHF + +T+GGST G SLQ+VE++L AG LEVV+VGETMF NSI+TL++FDWL VFDE HH+KNP T K A +K+ A+VFIGLTGTLVQNNLDE W++LN ++ GC G ++DFK+HFT PIL+GRKRGASRAD L ER++E+ V RDKVVLRR K +LG+LLK KI TVVFC+LT VQKLVYRTVLSLPEFKLLA A+DPCPCGR DA GSCCGM+P+D++SED VDP AVIWRRFHPDLEVC+K P CPYCC F+AISKLQKLANHP LLQVKP +Y E+ K L+DIAFA +AFSE AR IMA G+H G G S WDRRL R +NFLQL RDDTCGKMRTLKVLLERF+NK+KVLLFSYSTAMLDILQ LCS +GY++L+LDGNT KDQR +MI RFT+Q AIQNNVFLIST AGGTGLNLQ+A+KVILYDVNWNP+QDAQAEDRAYRIGQ +EVEVFRLVSTGTIEELTYMRQIYKLQTSAATMG+KAEGGLRQFEGVQG +QGELWGI+NLMKF GESMLL++R+++G GLPPLVPD++DGLVMEP N+V+IVN+YAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q+ ELGGVVM+HD+MVAADREEELPPG+QE I EVD MDD+ D+
Sbjct: 185 RKRKPHGESSGD--EMQVGFGLDNDDDFNCAAGQQREGGQNVVTVRGGEEEGETDDDLDDEGEGLKPTIRNPPFEDPGKRPLVLTNEAGGERAEVPASANRYLQGYQREGVEFMYRRVRHTDGPKGVILADDMGLGKTVQTIALLLALLKKTGTRRDRMDIKRRKDCKGHVSVAGKPVLIVCPRSVLPNWTGHLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKDILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKMLDDIAFANVAFSEEARVIMADLPGQHGGGAVSGSSIGXXXXXXXXXXXXEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGEKAEGGLRQFEGVQGVREEQGELWGISNLMKFSGESMLLELRQKYGNGLPPLVPDSKDGLVMEPQTNVVNIVNSYAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---QNAELGGVVMRHDEMVAADREEELPPGSQES-IAEVDMMDDQSTDDE 1059
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: A0A6H5JA09_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA09_9PHAE) HSP 1 Score: 592 bits (1526), Expect = 1.540e-186 Identity = 349/496 (70.36%), Postives = 398/496 (80.24%), Query Frame = 2
Query: 2126 AANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFHPDLEVCEKQ--------------PRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGG------WDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRNKNKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESMLLKMRREHGGGLPPLVPDTEDGLVMEPVQNIVDIVNNYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARAEGLNQDTELGGVVMQHDDMVAADREEELPPGTQEGNINEVDAMDDEDNHDK 3553
+A+DPCPCGR DA GSCCGM+P+D++SED VDP AVIWRRFHPDLEVC+K P CPYCC F+AISKLQKLANHP LLQVKP +Y ++ K L+DIAFA +AF E ARAIMA G+H G G S GG WDRRL R +NFLQL RDDTCGKMRTLKVLLERF+NK KVLLFSYSTAMLDILQ LCS +GY++L+LDGNT KDQR +MI RFT+Q AIQ+NVFL+ST AGGTGLNLQ+A+KVILYDVNW DAQAEDRAYRIGQ +EVEVFRLVSTGTIEELTYMRQIYKLQTSAATMG+KAEGGLRQFEGVQG +QGELWGI+NLMKF GESMLL++R + G GLPPL+PD++DGLVMEP N+V+I+N++AA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Q+ ELGGVVM+HD+MVAADRE+ELPPG+QE I EVD MDD+ D+
Sbjct: 4 SASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKVWRPAFLVLAPGSVGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNAHKMLDDIAFANVAFDEEARAIMAGLPGQHGGGVASGSSIGAGRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKQKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQSNVFLVSTTAGGTGLNLQAASKVILYDVNW----DAQAEDRAYRIGQLKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGEKAEGGLRQFEGVQGVREEQGELWGISNLMKFSGESMLLELRHKFGNGLPPLLPDSKDGLVMEPQTNVVNIINSFAAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---SQNAELGGVVMRHDEMVAADREQELPPGSQES-IAEVDMMDDQSTDDE 491
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI) HSP 1 Score: 533 bits (1373), Expect = 1.000e-158 Identity = 314/700 (44.86%), Postives = 431/700 (61.57%), Query Frame = 2
Query: 1106 LDGEWLIPTLRNPPFEDPDMRPLVLTNEAGGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGRKERKEHASVAGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDK-RVLGNLLKRKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDA-NRGSCCGMYPKDESSE-DGVDPAAVIWRRFHPDLEVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRN-KNKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESMLLKMRREHGGGL 3193
+D E L P + +PP+ + LV + G+ + S+NRYL+DYQ+EGV +++ + + G +LGDDMGLGKTVQ IAL +++L+K+GTG+D ++L R++ AS G LIV P V+P W + + WGHF++ + +G + L AGR EVV + +D L K + AV+FDE H K+ T + AA ++ VF GLTGTL+QN++ ELW +L++I+ G + F +HF+ PI + R A+ +D +RL+EL+ IRDK ++RR K LG++LK K TVVFCDL+ VQ+ +Y+ VLSLPEF+LLA A +PC CGR R CC P DGVDP AV++RR HP L C+K CP+CC A+SKLQK+ANHPCLLQ ++ KR + FA++AF++ AR IM GG LERS FL + + CGKM++L+ LL +F ++KVL+FS+STAMLD+L+ +GY Y RLDG T +R I F A VFLIST+AGG GLNL +A++V+LYDVNWNP+ QA+DRAYRIGQ+++V VFRL+S GTIEE+ YMRQIYKLQ ++A MGD+A GG RQF VQG QQGEL+GI NL+KF +S+L +R +H GL
Sbjct: 426 VDYEDLKPHIEDPPW----LGKLVPFDL--GEGGFINPSINRYLRDYQREGVRWLYAKFQAGQGG---ILGDDMGLGKTVQSIALLASVLRKSGTGRDSEELRRRRKEGLPASSTGLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLESGRDA------DDLMVALKAGRYEVVATSYDLLRACVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVF-GLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEPCNCGRSGRPTRARCCHKTPDSRGGGGDGVDPRAVLFRRLHPTLMECDK---CPFCCQLPAVSKLQKIANHPCLLQ----ENIRDPEHKRQQQRQFAEVAFTDRAREIM-----------------------GG----LERSQKFLDVSKVGVCGKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNSDRAGVF-VFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVAVFRLISKGTIEEMCYMRQIYKLQITSAAMGDQARGGRRQFNAVQGSKEQQGELFGIQNLLKFSDDSLLKTLRMKHEAGL 1074
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: A0A662XL21_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XL21_9STRA) HSP 1 Score: 399 bits (1025), Expect = 6.310e-113 Identity = 264/682 (38.71%), Postives = 373/682 (54.69%), Query Frame = 2
Query: 1160 DMRPLVLTNEAGGQRAG--VPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEG-RKERKEHASVAGK--------------AILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKRVLGNLLK-RKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDAN-RGSCCGMYPKDESSEDGVDPAAVIWRRFHPDLEVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQL--FRDDTCGKMRTLKVLLERFRNKN-KVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATM-GDKAEGGLRQFEGVQGDSSQQGELWGIANLM 3136
D PLVL++ G V A++N +L DYQ+EGV F++ R G +LGDDMGLGKT+Q+IAL SA+LKK G +DK+ R++R+E AG+ ILIV P ++L +WE L W S C+V G R ++ K Q+ G E++I + + L K W V+ DE+H KNP + A + + A +GLTGTL+QNN EL +++ I G GS ++F+ ++ I GRK+ A R+ ++ +EL + RR+K + + + +K VVFCDLTP Q Y +L++PEF+LL +PC CGR R CC P+ D A++W RFHPD C CP C +++L KL+NH LL+V P ++ P+ + FA A E A A+ GG VS NF ++ TCGKM L+ LL ++ + K LLFS ST MLDI+Q+ + +Y RLDG+T ++R +++ F + + +VFLISTKAGG GLNL SAT V+++D +WNP+ D QA+DRAYRIGQ ++V+V+RL++ GTIEE+ Y+RQIYK Q S T+ G KA R FEGVQGD QQGEL+GI NL+
Sbjct: 327 DEGPLVLSSSDGDAVCSHEVCANLNSFLFDYQREGVHFLYSAYRRNTG---AILGDDMGLGKTIQVIALLSAILKKCGDHRDKEVWRALRRQRRERLYAAGEDADESSVDFAGEAAPILIVVPASLLHNWEAELRVW--MSCCTVILHGKPEEREAIIK---QISRGEYEIIICSYDILKICLSELHKIPWEVVILDEMHCLKNPEAQLTKAVKAITCAKK-LGLTGTLMQNNEKELHCLVDTIAPGALGSWQEFRVYYGNDIKYGRKKSAVPEALERSRQKEKELRRVLIPYYFRREKEINPSFQEVKKCDQVVFCDLTPYQLAAYERILAMPEFELLRRGEEPCDCGRDSKQKRKQCCYQTPQSLG-----DSRALLWERFHPDGGACRS---CPNCMGLVCVAQLLKLSNHMELLKVNP----RDPPELQEYQADFAATALGEDADAV--------------GGVQQVS--------------NFQEMRAIGTKTCGKMLVLEKLLAVWKKRRQKTLLFSRSTRMLDIIQLFLISKAIAYSRLDGSTKVEERLQLVNNFNSKES-NTSVFLISTKAGGMGLNLPSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTLKGAKAP---RYFEGVQGDRQQQGELFGIRNLL 955
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: A0A8K1CPK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPK2_PYTOL) HSP 1 Score: 395 bits (1015), Expect = 4.140e-111 Identity = 273/715 (38.18%), Postives = 390/715 (54.55%), Query Frame = 2
Query: 1145 PFEDPDMRPLVLTNEA-GGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKD-----LEGRKERKEHASVAGK-----AILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKRVLGNLLK-RKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDAN-RGSCCGMYPKDESSEDGVDPAAVIWRRFHPDLEVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRD---DTCGKMRTLKVLLERFRNKN-KVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATM-GDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESMLLKMRREHGGGLPPLVPDTEDGLVME 3235
P + + PLVL + GG+ V A++N YL YQ+EG +F+F G +LGD+MGLGKT+Q+IAL SA+LKK G +DK+ E R R E+ + + +LIV P ++L +WE L W S +V G R +++ Q++ G EVVI + ++D + + W AVVFDE+H KNP +K A + + +GLTGTL+QNN EL +++ I G GS + F+ ++ I GRK+ A+ R+ ++ ++L + LRR+K + + + +K VVFCDLTP Q Y +L +PEF+LL + C CGR A R CC P G + A++W RFH + E C CP C +++L KL+NH LL+V P + P+ + FA A E + A+ GG V+ Q RD TCGKM L+ LL ++ K K LLFS ST MLDILQ+ + SYLRLDGNT ++R +++ RF + + +VFLIST+AGG GLNL +AT V+++D +WNP+ D QA+DRAYRIGQ ++V+V+RL++ GTIEE+ Y+RQIYK Q S T+ G KA R FEGVQGD QQGEL+GI NL+ + E +LK G+ +DGLV++
Sbjct: 413 PSPEVSLDPLVLKSPIEGGEDLTVCANINSYLFSYQREGAQFLFNAYAQHTG---AILGDEMGLGKTIQVIALLSAILKKQGDYRDKESWRQLRTERRARRSENGATFSENDGPNPLLIVVPASLLHNWESELHVW--MSCATVILHGKPEER---ERLLDQIERGEHEVVICSYDILKITLDRIRRTPWDAVVFDEMHCLKNPESKLTQAVKNIP-CKRKLGLTGTLMQNNEKELHCLIDTIAPGVLGSWQQFRSYYGDDIKYGRKKSAAPEAVERSRKKEKKLRQVLVPYYLRREKEINPSFQEVKKRDQVVFCDLTPYQLAAYERILEMPEFELLRRGEELCDCGRDSARKRKECCYQTPASM----GTNQRALLWERFHSNGEACNS---CPNCMGLVCMAQLLKLSNHMELLKVNP----HDPPELQEYQAQFAATALGEDSDAV--------------GGVNQVTT---------------FQEMRDIGSKTCGKMVVLEKLLAVWKRKRQKTLLFSRSTRMLDILQLFLISKAVSYLRLDGNTKVEERLQLVNRFNDPES-NISVFLISTRAGGLGLNLPTATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTLKGVKAP---RYFEGVQGDRRQQGELFGIRNLLCWK-EGGVLK-------GIQDSYRRDQDGLVIQ 1066
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: A0A836DFT0_9ROSI (Switch n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DFT0_9ROSI) HSP 1 Score: 376 bits (966), Expect = 1.640e-108 Identity = 251/689 (36.43%), Postives = 374/689 (54.28%), Query Frame = 2
Query: 1145 PFEDPDMRPLVLTNEAGGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGRKERKEHASVAGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKR-VLGNLLKRKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFHPDL-EVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRNK-NKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGE----SMLLKMRREHGGG 3190
PFE PLVL+ VPAS+N L ++Q+EGV F+++ R ++G VLGDDMGLGKT+Q IA +A+ +K D++ +E + H G +LI+CP +V+ +WE + W FS S+ G T R + + +L AG +E++I + L++ DW V+ DE H KN +K LA ++ K IGLTGT++QN + EL+ +L+ + G GSRE F++ + P+ G++ A + +A +R E L + K +LRR K +G+L+ K VVFC ++ +QK VYR++L LP+ + L + PC CG + CC + P +IW H D E C+ CPYC V + KLQ+++NH L++ P E K+ +D FA F V + GG +S+NF+ L CGKM+ L+ L+ + ++ +K+LLFSYS MLDIL+ +GYS+ RLDG+TP + R ++ F + Q VFLIST+AGG GLNL SA +V+++D NWNP+QD QA+DR++R GQ++ V VFRL++ G+ EEL Y RQ+YK Q S + K E R FEGVQ QGEL+GI NL + L + S ++++ + G G
Sbjct: 127 PFE-----PLVLSLLGEVPVIRVPASINCRLLEHQREGVRFLYKLYRDSHGG---VLGDDMGLGKTIQAIAFLAAVFEK-----DEESVESTTVKGNHGGKKG-PVLIICPTSVIHNWEIEFSRWASFS-VSIYHG---TNRDLILE---KLKAGGVEILITSFDTYRIHGSILSELDWEVVIVDEAHRLKNEKSKLYLACSEI-KTRKRIGLTGTVMQNKIMELFNLLDWVAPGSLGSREHFREFYDEPLKHGQRSTAPESFVRKADKRKEHLVAVLRKYMLRRTKEETIGHLMMGKEDNVVFCSMSELQKRVYRSMLQLPDIQCLVNKDLPCSCGSP-LKQVECCKR----------IVPDGIIWPYLHRDSPEGCDS---CPYCLVLPCLVKLQQISNHLELIKPNPRDEL----DKQKKDAEFASAVFG-----------------------PDVDLVGGN-----AQSENFMGLSDVKHCGKMQALEKLMFSWASRGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSGKIEN--RYFEGVQDCKEFQGELFGICNLFRDLSDELFTSKIIELHEKQGKG 743
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: A0A1V9Z8A1_9STRA (DNA repair and recombination protein RAD26 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8A1_9STRA) HSP 1 Score: 382 bits (980), Expect = 1.820e-108 Identity = 268/713 (37.59%), Postives = 372/713 (52.17%), Query Frame = 2
Query: 1091 EDGDDLDGEWLIPTLRNPPFEDPDMRPLVLTNEAGGQRAG---VPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGRKERKE----HASVAGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKRVLGNLLK-RKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFHPDLEVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRDDTCGKMRTLKVLLERF-RNKNKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESMLLKMRREHGG--GLP 3196
+D +D D W R PP E PLVL G VP +NR+L+ YQ+EGV +MF+ + +G +LGD+MGLGKTVQ+IAL SALL KTGT +DK +++ + ILIV P ++L +WE L W V G R + V A L G +VVI M + + + W VV DE+H+ KNP + A + + +GLTGTL+QN+ DEL +L I G GS DF+ ++ I RK+ A+ RA + ++L + LRRDK V K +VFC+LTP+Q+ Y VL+ +F +LA ++ C CGR D R CC V+WR+ HPD + C CP C F I++L KL+NH LL+V R + Q AFAK+AF E + AGG L+++ + CGKM L+ LL + R KVLLFS S MLDILQ +++RLDG+T D+R R+++RF +++ VFLIST+AGG GLN+ SAT V+++D +WNP+ D QA+DRAYRIGQ ++V+VFRLV+ GTIEE+ Y RQIYK Q + T+ K GG R FE + G Q GEL+GI NL+ F + ++ K ++H G+P
Sbjct: 272 DDEEDEDNTWP----RLPPPEGVSDDPLVLLEVPTGSYTRPIQVPGRLNRFLQPYQREGVAWMFQAIVDN---RGAILGDEMGLGKTVQVIALLSALLFKTGTAEDKAAFRRLAPQRDALVFDVNGTPPPILIVVPASLLANWELELKVW--MCCRPVILNGKPAER---EAVLAGLHRGTHDVVICSYDMLKSHLVQIQAVPWYLVVLDEMHNLKNPEARTTQAVRAL-RCTRRLGLTGTLMQNDTDELHCLLETIHSGALGSLSDFRAYYADDIKFARKKSAAPEAVARARAKEQQLRARLEPYYLRRDKAVHPTFATVHKSDKIVFCELTPLQRRAYERVLASADFTVLARGDERCDCGR-DQRRRRCCHTT------------GGVLWRQHHPDGKACAS---CPACLQFPCIAQLLKLSNHLDLLRVD--RTAPDDVQATTR--AFAKVAFGE-----------------------DLEAAGGS----LDQAQGLFEKMNPALCGKMVVLEKLLTTWARRHEKVLLFSRSVRMLDILQSFLVALACAFVRLDGSTKVDERLRLVQRFNADRSLR--VFLISTRAGGLGLNITSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVKVFRLVTLGTIEEMIYARQIYKQQLADTTL--KGTGGPRYFEAIIGVKGQHGELFGIRNLLGFKPDGVM-KAIQDHASIDGIP 919
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: T0R5K2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R5K2_SAPDV) HSP 1 Score: 379 bits (974), Expect = 2.960e-107 Identity = 261/701 (37.23%), Postives = 374/701 (53.35%), Query Frame = 2
Query: 1094 DGDDLDGEWLIPTLRNPPFEDPDMRPLVLT---NEAGGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGR---KERKEHASV----AGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATKKALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKRVLGNLLK-RKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFHPDLEVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRNKN-KVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESML 3160
D +D D E P L P E PLVL NE +R VP+ +NR+L+ YQ+EGV +MF+ V +G +LGD+MGLGKT+Q+I L SALL K GT DK+ R R+E ILIV P ++L +WE L W V G R + + A L G E+VI + ++ + W +V DE+H KNP ++ A + + +GLTGTL+QN+ DEL +LN I G GS +F+ ++ I RK+ A+ RA + ++L LRRDK + + + +K +VFC+LTP+Q+ VY V++ P+FK+L +DPC CGR + R CC + V+W++ HPD E C+ CP C F I++L KL+NH LL+V ++ + AFA +AF GT+ D + L ++ + CGKM L+ LL + K+ KVLLFS S MLDILQ + +Y+RLDG+T D+R ++++RF + +VFLISTKAGG GLN+ SAT V+++D +WNP+ D QA+DRAYRIGQ ++V+VFRL++ GTIEE+ Y RQIYK Q + T+ K + G R FE + G Q GEL+GI NL++F E ++
Sbjct: 290 DEEDDDDESTWPRLSPP--EGAIDEPLVLLDAPNEVYSRRVQVPSRLNRFLQPYQREGVAWMFQAVVEN---RGAILGDEMGLGKTIQVIGLLSALLFKDGTSSDKEAYRTRLRSASRREPVEFDLNGIPPPILIVVPASLLMNWELELKLW--MCCRPVILNGK---RQEREAILASLSRGTHEIVICSYDILKANLAQIQAVPWYLIVLDEMHCLKNPESQATKAVQALS-CKRRLGLTGTLMQNDTDELHCLLNTIHEGSLGSVSEFRSYYADDIKFARKKSAAPEAVERARAKEKQLRDCLVPYYLRRDKSIHPDFTRIQKFDKIVFCELTPLQRAVYDRVIASPDFKVLITGDDPCDCGR-NKTRRRCCYVS------------GGVLWQKHHPDDEACQA---CPACIQFPCIAQLLKLSNHLDLLRVNA----RDPDDVQAATKAFATVAF----------------GTDLD------KIG-------LYQAQGLFEKMNTALCGKMVVLEKLLSIWMRKHEKVLLFSRSVRMLDILQAFLISKACAYVRLDGSTKVDERLQLVQRFNRDPTL--SVFLISTKAGGLGLNITSATNVVIFDPSWNPAHDCQAQDRAYRIGQTRDVKVFRLITLGTIEEMIYARQIYKQQLTDTTL--KGKMGPRYFEAIIGVKGQHGELFGIRNLLQFKPEGVM 926
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: V4KFN1_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KFN1_EUTSA) HSP 1 Score: 374 bits (959), Expect = 7.810e-107 Identity = 258/728 (35.44%), Postives = 383/728 (52.61%), Query Frame = 2
Query: 992 RSREMQVDFDSDLGSDYDGGQAKLEEEGEEKGQEDGDDLDGEWLIPTLRNPPFE-DPDMRPLVLTNEAGGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGRKERKEHASVAGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATK--KALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKR-VLGNLLKRKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFHPDL-EVCEKQPRCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRNK-NKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMKFLGESM 3157
++ E QV+ DS+ G D K EEE +E+ D+ E+ P L F+ PLVL++ VPAS+N L +YQ+EGV+F++ ++ G +LGDDMGLGKT+Q IA + + K G D LE K +LI+CP +V+ +WE + W F SV G + + +L+AG +EV++ F L+ +W V+ DE H KN +K +A K K IGLTGT++QN + EL+ + + G G+RE F++ + P+ QG++ A A +R + L + K +LRR K +G+L+ K VVFC ++ VQK VY+ +L LPE + L ++PC CG + CC + P IW H D + C+ CP+C V + KLQ+++NH L++ P K+ P+K+ +D F F GT+ + + GG + S++F+ L CGKMR L+ L+ + +K +K+LLFSYS MLDIL+ +GYS+ RLDG+TP + R ++ F + Q VFLIST+AGG GLNL SA +V+++D NWNPS D QA+DR++R GQ++ V VFRL++ G++EEL Y RQ+YK Q S + K E R FEGVQ QGEL+GI+NL + L + +
Sbjct: 65 KAAETQVE-DSNCGEDDHKRNIKFEEEEDEE-----DEKPTEFGRPGLSRAEFDYTGPYEPLVLSSIGEIPIIQVPASINCRLLEYQREGVKFLYNLYKNNYGG---ILGDDMGLGKTIQTIAFLAGVYGKDGDSGDTSILESEKG----------PVLIICPSSVIHNWESEFSRWASFFKVSVYHGANR------DMILEKLNAGGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLVIKTKKR---IGLTGTVMQNKMSELFNLFEWVAPGSLGTREHFREFYDEPLKQGQRATAPVRFVQIADKRKQHLVSVLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSEVQKRVYQRMLQLPEIQCLVNKDNPCACGSP-LKQSQCCRR----------IVPEGTIWSYLHRDNHDGCDS---CPFCLVLPCLLKLQQISNHLELIKPNP----KDEPEKQKKDAEFVSAVF----------------GTD-------IDLVGG-----VSASESFMDLSDVKHCGKMRALEKLMASWLSKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYTRQVYKQQLSNIAVAGKME--TRYFEGVQDCKEFQGELFGISNLFRDLSDKL 714
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Match: A0A8J9SP64_9CHLO (DNA excision repair protein ERCC-6-like 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SP64_9CHLO) HSP 1 Score: 379 bits (973), Expect = 1.050e-106 Identity = 254/712 (35.67%), Postives = 373/712 (52.39%), Query Frame = 2
Query: 1103 DLDGEWLIPTLRNPPFEDPDMRPLVL---TNEAGGQRAGVPASVNRYLKDYQKEGVEFMFRRVRHANGPKGVVLGDDMGLGKTVQIIALFSALLKKTGTGQDKKDLEGRKERKEHASVAGKAILIVCPRTVLPSWERHLAEWGHFSSCSVTTGGSTTGRGSLQKVEAQLDAGRLEVVIVGETMFTNSIDTLAKFDWLAVVFDEVHHFKNPATK------KALAAEKMDKADVFIGLTGTLVQNNLDELWTILNMIEIGCFGSREDFKQHFTTPILQGRKRGASRADCLRATERLEELNVIRDKVVLRRDKR-VLGNLLKRKISTVVFCDLTPVQKLVYRTVLSLPEFKLLAAANDPCPCGRVDANRGSCCGMYPKDESSEDGVDPAAVIWRRFH-----------PDLEVCEKQP---------RCPYCCVFAAISKLQKLANHPCLLQVKPLREYKEHPQKRLEDIAFAKLAFSEPARAIMAAPVGEHEGTERDGGSASVSVAGGGWDRRLERSDNFLQLFRDDTCGKMRTLKVLLERFRN--KNKVLLFSYSTAMLDILQMLCSGEGYSYLRLDGNTPKDQRPRMIKRFTEQTAIQNNVFLISTKAGGTGLNLQSATKVILYDVNWNPSQDAQAEDRAYRIGQQQEVEVFRLVSTGTIEELTYMRQIYKLQTSA-ATMGDKAEGGLRQFEGVQGDSSQQGELWGIANLMK 3139
D D P L N P + + PLVL T++ R VP S+NRYL++YQ+EG++F+FR+ AN +G +L DDMGLGKTVQ I +A+L K GT D + + A+ K ILIV P +V+ +W+R + WG F ++ G S++ ++Q + + G E+++ N+ID + + DW A +FDE H KN T A + GLTGT +QN+ ELW++L+ G E F+ + P+ +G++R + +A +R E L+ + + +LRR K + + L +K +VFC L +Q YR VL+ P+F+LL + + C CG + R CC Y + E GV +W FH + + C++ RCPYC V ++ LQK++NH L++V P K + + +A E A+ + G AG DR NFL L CGKM L+ LL+ + + NKVL+FS+S ML+I++ L GY Y RLDG+T +++R + F + +I +FLIST AGG GLNL +A KV++ D +WNP+ D QA+DRA+RIGQ ++V V+RL++ GT+EE+ Y RQ+YK Q SA AT G K R F GVQGD +GELWGI NL K
Sbjct: 191 DEDHAQAAPNLENAPSDGVN-EPLVLLAPTDDGTQVRLEVPGSINRYLREYQREGIQFLFRQYA-AN--QGAILADDMGLGKTVQTIGFVAAILGKMGTNADLQPVRA------DANARPKLILIVAPSSVVTNWQREFSTWGAFR-VAIYHGSSSSKEAAMQSI----NHGTAEIILTTYDTLRNNIDMMREIDWHAAIFDECHKLKNKRTTTKSDNISTYGAANSLRTKRRYGLTGTAMQNDYGELWSLLHWANPTRMGDWEQFQDFYVKPLKEGQRRDCTDLQLAKAHQRQERLDKLLQQFMLRRTKESTIKDQLPKKTDNIVFCKLAALQMRAYRRVLNTPDFQLLVRSEEQCDCGSGEI-RAKCC--YTEARPEEGGV-----LWPHFHRCTCDNAYDECSNPKGCKRHRPNGCEFGRLRCPYCLVLPCLTILQKISNHLELIKVDP-------EDKSVTEDEWALPRAKELAQMVF--------------GEDLEEAAGDTLDR------NFLHLSSSAHCGKMAALEHLLQLWSSAGNNKVLVFSHSVKMLNIIEQLIVRAGYHYARLDGSTKREERQALCDSFNQSPSIF--LFLISTTAGGLGLNLTAANKVVIIDPSWNPAHDLQAQDRAFRIGQHRDVSVYRLIAAGTLEEMIYTRQVYKQQQSAVATEGSKE---TRYFYGVQGDRGNKGELWGITNLFK 847 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.169.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.169.3 >prot_P-littoralis_Contig6.169.3 ID=prot_P-littoralis_Contig6.169.3|Name=mRNA_P-littoralis_Contig6.169.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1468bp MQPSRANALPFNLNSDENREARAVFLRTTQESILSSRDQQGSGGGGGGGGback to top mRNA from alignment at P-littoralis_Contig6:681671..700877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.169.3 ID=mRNA_P-littoralis_Contig6.169.3|Name=mRNA_P-littoralis_Contig6.169.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=19207bp|location=Sequence derived from alignment at P-littoralis_Contig6:681671..700877+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:681671..700877+ >mRNA_P-littoralis_Contig6.169.3 ID=mRNA_P-littoralis_Contig6.169.3|Name=mRNA_P-littoralis_Contig6.169.3|organism=Pylaiella littoralis U1_48|type=CDS|length=4404bp|location=Sequence derived from alignment at P-littoralis_Contig6:681671..700877+ (Pylaiella littoralis U1_48)back to top |