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Homology
BLAST of mRNA_P-littoralis_Contig6.115.2 vs. uniprot
Match: A0A6H5KRS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS0_9PHAE) HSP 1 Score: 264 bits (674), Expect = 5.010e-68 Identity = 456/835 (54.61%), Postives = 484/835 (57.96%), Query Frame = 3
Query: 3 GINGGAGAPHGSYVGQQXXXXXXXXXXXXXXXXXDRPKKGDRGSQQGRGXXXXXXXXXXXXXXXXXSTGRDMLSAANFPPLPGSDGATAGSTPXXXXXXXXXXXXXXXXXXX-----SGVEDVAEEGSGSAVAPAATVAGGAAPSAANAPTEASENTAAAPAGGLGYPGPFIQYQPDDILKIVSTLSQAEVAAVPGVADIREHALAFEPEANLGLLMRQRSVSIDECREQLRKGRPVHREGVISGAVDYGSYMYGEGHDPQQXXXXXXXXQLGPAPRGGGGESYGQRGSXXXXXXXXXKGDRSRREKG-DRTSSDXKARSEDKSSRGKGVIAAPTAXXXXXXXXXXXXMGAYAAALLKKPRQAARPQQAAS-----------------------TTAKPSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGAGSQGKDSAAVKDGAASGGKGKGTGVPASSTXXXXXXXXXXXXXXXXXSAPPRPTRGWEKPEVTQQKQRGWSRGSDAGSRGSGKSAAAK-------------SGPAP--------GSSAGLENKKSPSTTASVSGDEGVGDSVT---DLSAEGSEGSGSTDGGSRSGGRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTGSSPWGGKKSFLDVAKAPGNPPPPLATKQPSSSSLSMS----NNKGDRTAVAKSPLRGRPEPPSGESRDMKRSGGGQRGDRDG----GSYHK----SVGGGVKE--RLPNGRAGAPPPREKGAWA 2306
G NGGAGAP Y GQ XXXXXXXXXXXXXXXX KKGDRG+ +GXXXXXXXXXXXXXXXX S GRDMLSAANFPPLPG+DG XXXXXXXXXXXXXXXXXXX + +D+ G A +PAA V E A AP GGLGYPG FIQYQPDDILKIVSTLSQ++VA VPGVADIREHALAFE +ANLGL+MRQRSVSIDECREQLRKGRPVHREGVI+GAVDYG+YMYGEGHDPQQ Q PRG G G XXXXXXXXX SRREKG DR S X +G XXXXXXXXX MGAYAA LLK PR ++AKPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX APPRPTRGWEKPEVTQQKQRG S GSDAG RG GK+ +AK SGPA GSSAG E K + TA + DS SAEGS G GS G++P XXXXXXXXXXXXXXXX XXXXXXXXXXXX WGGKKSFLDV KAPGN PPP+AT NK KSPLRGRPE P GESRD KRSGG RG+RDG G +HK + GGG K+ RLPNGR+G REKGAWA
Sbjct: 397 GANGGAGAP---YSGQHQXXXXXXXXXXXXXXXX---KKGDRGNSAQQGXXXXXXXXXXXXXXXX-SGGRDMLSAANFPPLPGTDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAASTDDMVTTGEADASSPAADV---------------PEAPAPAP-GGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHALAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQ--------QAVSVPRGEG------HGXXXXXXXXXXXXXXSRREKGTDRPSXXXXXXXXXXXXXXRGKSXXXX---XXXXXXXXXPMGAYAAXLLKNPRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSAKPSAKERKGDKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAKSPPAKSSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXAPPRPTRGWEKPEVTQQKQRGLSAGSDAGKRG-GKATSAKAAGASYGLYIFAASGPAHPHSGEQSVGSSAGTEKKSVSAATAPIXXXXXXXDSAAAAASFSAEGSSEGGGVSDGSGGSGKHPTSXXXXXXXXXXXXXXXXTDAAAPAGGDGEDAAKAPEGGKAXXXXXXXXXXXXQ----------------WGGKKSFLDVVKAPGNLPPPIATAXXXXXXXXXXXXXXGNKAKGGGRMKSPLRGRPEHPFGESRDTKRSGG--RGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGVSREKGAWA 1163
BLAST of mRNA_P-littoralis_Contig6.115.2 vs. uniprot
Match: D8LL21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL21_ECTSI) HSP 1 Score: 247 bits (631), Expect = 4.810e-64 Identity = 316/644 (49.07%), Postives = 343/644 (53.26%), Query Frame = 3
Query: 426 ANAPTEASENTAAAPAGGLGYPGPFIQYQPDDILKIVSTLSQAEVAAVPGVADIREHALAFEPEANLGLLMRQRSVSIDECREQLRKGRPVHREGVISGAVDYGSYMYGEGHDPQQXXXXXXXXQLGPAPRGGGGESYGQRGSXXXXXXXXXKGDRSRREKG-DRTSSDX-KARS-EDKSSRGKGVIAAPTAXXXXXXXXXXXXMGAYAAALLKKPRQAARPQQAASTTAKPSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGAGSQGKDSAAVKDGAASGGKGKGTGVPASSTXXXXXXXXXXXXXXXXXSAPPRPTRGWEKPEVTQQKQRGWSRGSDAGSRGSGKSAAAKSGPAPGSSAGLENKKSPSTTASVSGDEGVGDSVTDLSAEGSEGSGSTDGGSRSGGRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTGSSPWGGKKSFLDVAKAPGNPPPPLATKQPSSSSLSMS----NNKGDRTAVAKSPLRGRPEPPSGESRDMKRSGGGQRGDRDG----GSYHK----SVGGGVKE--RLPNGRAGAPPPREKGAWA 2306
AN P +A+ A AGGLGYPG FIQYQPDDILKIVSTLSQ++VA VPGVADIREH+LAFE +ANLGL+MRQRSVSIDECREQLRKGRPVHREGVI+GAVDYG+YMYGEGHDPQQ Q G APRG G G XXXX K DRSRREKG DR SSD KAR E+K R +A AG++ KD A KD A XXXXXXXXXXXXXX APPRPTRGWEKPEVTQQKQRG S GSDAG+RG GK+ +AKS GSSAG + K + TA +SGD+GVGDS T A GS++GG S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX DV KA NK KSPLRGRPEPPSGESRDMKRSGG RG+RDG G +HK + GGG K+ RLPNGR+G REKGAWA
Sbjct: 383 ANHPQQAAAPAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQ--------QAGSAPRGEG------HGGXXXXGESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRADPAVAT---------------------------------------------------------------------------------------------------------------------AGAKSKD--ASKDSGA-----------XXXXXXXXXXXXXXXXXXAGEWAPPRPTRGWEKPEVTQQKQRGLSAGSDAGNRG-GKATSAKSA---GSSAGTDKKSISAATAPISGDDGVGDSATAAVAASFSAEGSSEGGGVS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAPEDGKAAXXXXXXXXXXXXXXXXXXXXXXXXXDVVKAXXXXXXXXXXXXXXXXXXXXXXXXXGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGG--RGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 871
BLAST of mRNA_P-littoralis_Contig6.115.2 vs. uniprot
Match: A0A836CN94_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN94_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.390e-16 Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = 3
Query: 480 LGYPGPFIQYQPDDILKIVSTLSQAEVAAVPGVADIREHALAFEPEANLGLLMRQRS-------------VSIDECREQLRKGRPVHREGVI-SGAVDYGSYMYGEG 758
GY GPF +Y+P++IL+IV +S +VA + G D EH LA E +A+ G+L+RQ S VSIDE REQLR+GRPVHRE ++ +GAVDY + M+G+G
Sbjct: 483 FGYSGPFTKYKPEEILRIVQGMSADDVAVIGGGVDPLEHTLALEAKADPGVLLRQHSXXXXXXXXXXXXXVSIDEVREQLRRGRPVHREAMLPAGAVDYSTMMFGDG 589
BLAST of mRNA_P-littoralis_Contig6.115.2 vs. uniprot
Match: A0A7S3XW85_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW85_HETAK) HSP 1 Score: 86.3 bits (212), Expect = 7.590e-16 Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 462 AAPAGGLGYPGPFIQYQPDDILKIVSTLSQAEVAAVPGVADIREHALAFEPEANLGLLMRQRSVSIDECREQLRKGRPVHREGVISGAVDY 734
AAPAG Y GP+ +Y P++IL++VS ++ A++ A PGV D H +A NLGLL QR+VSIDE RE L++G+P+ RE V+ G VDY
Sbjct: 42 AAPAG---YQGPYTKYDPEEILQLVSAMADADIYAPPGV-DPAAHEVAMVAAPNLGLLRNQRTVSIDETREVLKQGKPLIREAVMQGEVDY 128
BLAST of mRNA_P-littoralis_Contig6.115.2 vs. uniprot
Match: A0A836CKL7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL7_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.740e-9 Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 612 PEANLGLLMRQRSVSIDECREQLRKGRPVHREGVIS-GAVDYGSYMYGEGH 761
P+A+ GLL RQRSVSIDE REQLR+G+PVHRE ++ GA DY + M+G+ H
Sbjct: 3 PDADDGLLQRQRSVSIDEVREQLRQGKPVHREATVAAGAQDYCTLMFGDHH 53
BLAST of mRNA_P-littoralis_Contig6.115.2 vs. uniprot
Match: A0A812SIG5_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SIG5_SYMMI) HSP 1 Score: 64.3 bits (155), Expect = 4.790e-8 Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 3
Query: 621 NLGLLMRQRSVSIDECREQLRKGRPVHREGVISGAVDYGSYMYGE 755
N LL+RQR+ SIDE REQ+++GRPV RE VI+G VDYGS YGE
Sbjct: 6 NTDLLLRQRTFSIDETREQMQQGRPVQREAVIAGDVDYGSLFYGE 50
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LL21 |
| PFAMs | La |
| Model size | 6816 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K15322,ko:K18757,ko:K18763 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Evalue | 2.88e-68 |
| EggNOG OGs | KOG2591@1|root,KOG2591@2759|Eukaryota |
| EC | 3.1.27.9 |
| Description | positive regulation of translation |
| Cds size | 2094 |
| COG category | S |
| BRITE | ko00000,ko03016,ko03019 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791235.965996-UTR-P-littoralis_Contig6:425090..429597 | 1680791235.965996-UTR-P-littoralis_Contig6:425090..429597 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 425091..429597 - |
| 1680791236.0259502-UTR-P-littoralis_Contig6:434397..434612 | 1680791236.0259502-UTR-P-littoralis_Contig6:434397..434612 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig6 434398..434612 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791235.9804862-CDS-P-littoralis_Contig6:429597..429894 | 1680791235.9804862-CDS-P-littoralis_Contig6:429597..429894 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 429598..429894 - |
| 1680791235.9995065-CDS-P-littoralis_Contig6:430475..430886 | 1680791235.9995065-CDS-P-littoralis_Contig6:430475..430886 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 430476..430886 - |
| 1680791236.010369-CDS-P-littoralis_Contig6:433011..434397 | 1680791236.010369-CDS-P-littoralis_Contig6:433011..434397 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig6 433012..434397 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.115.2 >prot_P-littoralis_Contig6.115.2 ID=prot_P-littoralis_Contig6.115.2|Name=mRNA_P-littoralis_Contig6.115.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=698bp
MLSAANFPPLPGSDGATAGSTPATSPASSAAAADAEQSAASSGVEDVAEE
GSGSAVAPAATVAGGAAPSAANAPTEASENTAAAPAGGLGYPGPFIQYQP
DDILKIVSTLSQAEVAAVPGVADIREHALAFEPEANLGLLMRQRSVSIDE
CREQLRKGRPVHREGVISGAVDYGSYMYGEGHDPQQQQQQSGGGQLGPAP
RGGGGESYGQRGSGGGAGEGKKKGDRSRREKGDRTSSDDKARSEDKSSRG
KGVIAAPTASSSSPAAAAPEPMGAYAAALLKKPRQAARPQQAASTTAKPS
PASTKLSSSKSSGKDRKSGGSGDNKGKDGSNGNSSSSGGSGSGATGGGSS
SSASGKNAAASSAGGSAAATARGAGSQGKDSAAVKDGAASGGKGKGTGVP
ASSTAAAAAAAATTVAAVVGGSAPPRPTRGWEKPEVTQQKQRGWSRGSDA
GSRGSGKSAAAKSGPAPGSSAGLENKKSPSTTASVSGDEGVGDSVTDLSA
EGSEGSGSTDGGSRSGGRNPPSSNSSSSAGPKEGPAGSSPETSSAAPAAA
TTAAAAAEEASSGSAKSGAAAEQGSAAAVAAATADTGSSPWGGKKSFLDV
AKAPGNPPPPLATKQPSSSSLSMSNNKGDRTAVAKSPLRGRPEPPSGESR
DMKRSGGGQRGDRDGGSYHKSVGGGVKERLPNGRAGAPPPREKGAWA* back to topmRNA from alignment at P-littoralis_Contig6:425091..434612- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig6.115.2 ID=mRNA_P-littoralis_Contig6.115.2|Name=mRNA_P-littoralis_Contig6.115.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9522bp|location=Sequence derived from alignment at P-littoralis_Contig6:425091..434612- (Pylaiella littoralis U1_48)
GGGGAATCAACGGGGGAGCGGGTGCGCCACACGGGAGCTACGTGGGACAG
CAGCAGCAGCAGCAACAGCAACGCGGGGGGGAAGGGGGAGGGCGAGGGGG
AGGCGACCGCCCAAAAAAGGGTGATAGAGGGTCACAACAGGGGCGCGGCG
GGGGCGGCGAAGGAGGCGGCCGTGGCGGAAAGTCAGCGTCGTCTCGTGGT
TCCACCGGCCGCGATATGCTCAGCGCGGCCAACTTCCCGCCCTTGCCAGG
GTCGGATGGCGCGACGGCTGGATCTACGCCGGCGACGTCGCCGGCCTCCT
CTGCAGCGGCGGCTGACGCCGAGCAGTCGGCTGCATCGTCGGGGGTTGAA
GATGTCGCCGAGGAGGGCTCAGGTTCGGCGGTAGCACCAGCAGCTACCGT
GGCGGGGGGCGCTGCGCCCTCGGCGGCAAACGCTCCCACCGAGGCATCGG
AGAACACTGCGGCGGCACCGGCGGGTGGCCTGGGGTACCCCGGGCCGTTT
ATCCAGTACCAGCCGGACGACATCTTGAAGATTGTGTCGACCTTGTCTCA
AGCCGAAGTTGCCGCCGTACCGGGAGTGGCGGACATCCGCGAGCACGCGT
TGGCGTTCGAGCCGGAGGCTAACCTGGGGCTGCTGATGCGCCAGCGGTCT
GTGTCGATCGACGAGTGCAGGGAGCAGCTCCGCAAGGGGCGACCGGTCCA
CCGCGAGGGCGTGATATCCGGAGCAGTCGATTACGGCAGCTACATGTACG
GAGAGGGTCACGACCCGCAGCAGCAGCAGCAGCAGAGCGGCGGTGGCCAG
TTGGGGCCGGCGCCAAGAGGGGGCGGCGGAGAAAGTTACGGTCAGCGGGG
TTCGGGAGGAGGGGCGGGTGAGGGTAAGAAGAAAGGGGACAGGAGTCGCA
GGGAAAAGGGAGACAGAACATCGTCTGATGACAAGGCGCGGAGCGAGGAC
AAGTCCAGCAGAGGCAAGGGTGTCATTGCCGCACCAACAGCGTCTTCTTC
GTCTCCGGCGGCAGCAGCACCAGAGCCTATGGGCGCGTACGCGGCGGCTC
TGCTCAAGAAGCCCCGACAGGCGGCGCGACCGCAGCAGGCGGCCTCGACC
ACCGCCAAGCCCTCCCCCGCTTCTACGAAGCTTTCCTCGAGCAAGTCGTC
GGGCAAGGACAGAAAGAGCGGCGGCAGCGGCGACAACAAGGGAAAGGACG
GCAGCAACGGTAACAGCAGCAGTAGCGGCGGATCGGGATCCGGCGCGACG
GGCGGCGGCTCGTCATCGTCTGCTAGTGGCAAGAATGCGGCGGCGTCATC
GGCAGGGGGCTCCGCTGCTGCTACCGCACGAGGAGCCGGGTCTCAAGGCA
AGGACTCCGCCGCCGTGAAGGACGGTGCGGCAAGCGGCGGCAAGGGGAAG
GGAACCGGCGTTCCGGCGTCGTCAACGGCGGCGGCGGCGGCGGCGGCGGC
GACAACGGTAGCGGCAGTGGTGGGTGGAAGCGCACCTCCACGGCCAACAC
GAGGCTGGGAGAAACCAGAGGTCACCCAGCAGAAGCAACGCGGGTGGAGT
AGAGGCAGCGACGCGGGAAGCAGGGGGAGCGGCAAGTCCGCCGCGGCAAA
GGTCAGTGTGCGCTTTGTTTTTGTTTTGTTGGGTGCTGAATGGTGGCCCA
CGCGCACAACTGGAAAGGGAGGAGTCTGTTCTCAACCGTGCGTAGCATCA
CTCGTTTGGCTTTGCAGATGAGTATCGTTTGCTTTGTTTGGCCTGTACAA
GAGAGTTTATTTTATCTTGACCCCAACCTCCCTCCCTGCTCATTTGCCTG
TTTCTGCCCAGCAGCATAGTCTGGAGAAGAGGGATAAATAGGTCTAGGCG
CACAGAGTGACGACGGCAGCACCGGTGCCCTCATCGCGTAGCCGATACTC
ATTATTTTGAACAACGGTTGCTGCCCACACTTGTAGCACAGCATTTTCGT
CCTGATCACTGGCTGCTGTCAAACGGCGTCACGTCTCTCGGGATGGACTT
ATTCTGTGGTTACTTTGTTGTTGCAGATGTTTGCCCCACTTCATGCTCCA
GTTTTTTGCGGTGCCAGAATGAAGACAAAAATACCTTGCTGACGCTCGTT
TTTTCGAGCGGTGGGGCTTACGCCTCTGGTGTATTCGTACTGTCTGACTG
CTCCCGCTCATCTGCTCGAAACGGCGTTTTTTTTTCCGGCACGAATCTCA
TCAGTTTGATCGGGGATTGTCTGGGACATACCGCTTTTTTGCGAGAACAG
CGGGACTTTTCCCGCCCACGTTCGGCCTTGCTCTCTGTTCTTGCATCATC
GCTGTATATATATGAATATTTTGAGAGGTTATGCCGACAAGCTTCATCTC
AACGCCGGTCGTTTTCTCTTAAGCTACCCGGCGTGCACTTTTCTCGTGCA
CTTTCCTCCCTAGTGTGTTCGCACAGCAGTCGTTTGGGTGCAATTGGTTT
TGCGTGTTGCGCGATTTTTCAGAATGACGGCAAAGCTTTCCGGCTGATTC
TCTTTTTTTTTTTTTCACGAGTTATGAGGTTTCCACGACGTGCGTGTAGC
TGTACTGCTGCTTTCTTTTTTGGGTAGCAGTGTGCCTTTTCATGTCTGAT
GGGCAGCAACACATTTGATGTGCCGATGTGCTTTCGCGAAAGTTGGCGTG
CTTCGAAAAGAAAACTTTACCAGAATGACGACAAGCATTGCCTGACCGAT
GCTCGTTTGTGACGGGCGATGGGGCGTACACTTCAAAAGGTGTATTCGTA
CTGTCTGACTGTTCTGTTATGCCACTTCTTTGCACGTAAATATTTTTCCA
TCCCCTCGTTTTTTTTCATGTCTCAGTACTTATATATCATCGCTATCGTT
GTGACGGGAGTTACCGGATCGAAGCTGAGCATTGCTGTCGGGTTTTTTCA
CGAGCGGCGGGCGCAGCGCTGTTATTTGTCTGGCTGTAACCTGGGTGTGT
GTCCGGTTTTGATAGGCATCACGGCGGTACTGCACCCCTTGAATGTGCTT
TTTCTTGTAAAATGTTCGCCTCAGTTGATTGAATTTTTTGTCATGCTGTA
AGATGTGTCAGAATGACGACAAACCTACCTGGCCGACGCTCGTTTTTTTT
CGACGATCGATGGGGCTTGCACTTTCAAGTGTATTCGTACTGTCTGACTG
GCATCAACCGCAACGGGAGGCTGCTGCTGTAAGGTTGAGGTTGTCTGCTG
GTCCATTATACCGCAGAGATCTGGATGTTCCATCGTGTACGGCGCTCGTT
TTCAGAGCAACGATCACTTGTTTTGGTCACACACTTGAGCGGCAAACGCT
CTGTTTCATGGGCCGATGCGGATCCAAAGTTTTTATTGTAGATTGCATTC
GTGCGGTCTCCAATTGGCGGCACTGCTGAACTTCCAGAGCGATTTTGTCT
CGGAAAGCGCACCTTCCGAGTTGGCGAGCGCGTTGAGATGTTTTCATGCA
CTGGTACAGATCGGTGGAGGAAGTAGTCAATGAATAATACTTTGGCTGCT
GTACAGCTGGCTGACTGGGTTTGTCACAAGACGACGAGGCGTTTTTTTTT
GTGCCGTCTGCTCCACAAAAAGGCTCCCTGTTGGGTTTTTGCGCCCGTGA
AGCATCGCCGTCACGTCCAGCTGTACACGCGAGCTTCAAATGCCCTTTTG
TTGTGCTACACATGCGTCTCAAATGTATGCACGCGTCCTTTCCGTCCATG
CCTTTCGTTCGTTTTTTTTGCATCAGTCGGGTCCCGCCCCCGGAAGCTCT
GCCGGGTTAGAAAACAAGAAATCTCCGTCGACGACCGCCTCAGTCTCCGG
AGATGAAGGGGTCGGAGATTCAGTGACGGACTTGTCGGCTGAGGGGTCGG
AGGGCAGCGGCTCGACAGACGGGGGCAGTCGTAGCGGAGGCAGGAATCCC
CCGAGCAGCAACAGCAGCAGCAGCGCGGGACCCAAGGAGGGACCGGCGGG
CAGCTCTCCAGAGACCTCTTCAGCAGCACCAGCAGCCGCGACAACAGCGG
CGGCGGCGGCAGAGGAAGCGTCTTCGGGATCCGCGAAGAGCGGGGCGGCG
GCAGAACAGGGTTCGGCGGCGGCGGTTGCAGCCGCAACGGCTGACACTGG
GTCTAGTCCGTGGGGAGGGAAGAAGTCCTTCCTTGATGTGAGTGGGGTAG
AGCCTGGTGGCGTCGCGTCGTCGCCGTCAGCACGCGGATCAATTAGCCAG
AGCCAGCATTACTCTCGACAGAGAGCGGACATCCTGTGCACGTACTTGCA
CAAGGAGGGTAATTTCTATCGTCTTCCTGGATAAGCCGCAGCTTTGATTC
CCCCTTGGCGTCTCTTGTCTAATCGCCCCCCCCCCCCACCCAAAATAAAG
TACGATGATAAAAAATGAGCAACTAGTCCCTTTGCGTCAAGTCCCACCAA
CTACCTTGCACTGCCCCCATCCTACCTCCTGGATACAAGTACTTAATTTT
GTCGTCCGGCGAAAATGCGATTACGGCGAGTTTTGCACACGTATCATCGT
GTCGGTCCGGACCATCAGGCAAACACTCCACGAGTGCATAATGCTGTACC
ATTTGACAGGGAAGACAAATCCGGCCATTTTCTCGTTTTTGTATCCCCCC
CCCTGCCCGCCATTTTTTCATTTTTTTGGCGCGCCCCTCTTTTTCCCCCC
CCCCCCCCTTCTACCATTATCCCCTTCTCCCTCTCAACATTACGCCGCTT
TGTTGTCACGGCACGAAGGTCGCCAAGGCCCCGGGAAACCCGCCGCCTCC
CCTCGCCACGAAGCAGCCGTCTTCGTCCTCGTTGTCGATGAGCAACAACA
AGGGCGACCGCACGGCGGTAGCGAAGTCTCCTCTGCGGGGACGCCCCGAG
CCTCCCAGCGGGGAGAGCAGGGACATGAAGAGATCGGGCGGCGGTCAGAG
AGGGGACAGAGACGGCGGCTCGTACCACAAGAGCGTCGGGGGGGGCGTGA
AAGAGCGCCTGCCGAACGGGAGGGCTGGTGCCCCCCCCCCCCGTGAGAAG
GGAGCGTGGGCTTGATTGGTGCCGTGTCAGAGGAGGGCAGGAAGGCAAGC
AGGGTAGGAATGAAGAGGGGAACGCGCGTGAGGGTAGAGCGTCGTCAGCA
TCAGTGGACGCTTTGCGTTGCTTTGCTTTGCGTTGCCCTCCTTTTTTGGA
TTTTGGTTTTGGTTTTTGCACCCACATGTCATGTGCCCTAGAATGTGCTC
CGATATGGTTTTTTTTTTGTACGAGTTCCTGCTGCCTTATGCTATGTCTC
CTTCTCTCGTTTTAGCGGAACCGGCTGGTGCCGTGGAAAAGTTGAGTGAA
AGGGTTGATCGGGTGAGAATGACTTGGCGTGGCTGAGGGGAAAAACGAGG
CGGGAGTGAGTGCGTGATGCCCCGGCCAAAGATGCACCGGGATTATGAAA
ATGAAAGATTGGACTGCTGATGCCTGCGCCCAGATTTGAAGGAAGAATGT
TCATGGTTAGTTCCGGGCTCGTCGTGGCTATATTGGTGTGGGGTTGAACA
GGGTGTTGGGTGTGGCGTTTTGGTGTTGCTCCTGGGTTTCCTGCCTCCTC
AAAATGTATTCGCTTCGCACGGCTTCGTGTTCCATATACTTGTAGTAGTT
TCCCTTTGTGTCCGCCTTCTCGTTTTTCATCTCGCCGTATGACATATCAT
GACCATACGTGCACTTTTTGTTTTGTTTCGGTTGGTAATGTTTGTGGTTG
ATCTTGTCTCGGATGTTTTGCGCATCATTCGGACGTGAGGAGAACGAGTC
GTAGCTCCACCACCACGCGACGGGCGCTTCGTTGTCATTCGGCGGGGCGG
TACGCTGGAGTGTGAGCAGGCAGCCAGTCAGTGTGTCTGGTGCGAAACTC
GCTGGTGAAATGAAACTGAAATACTTCAGACGATAATGGTTTTTATCATA
TCGTGGAATATTCGCGGGATGTATCGAGTCGGTTCCGTCCGCCATGCATG
GTGGATTCAGGAGAGCTGTCGGCAGCAAAATAGGAAAGTGAAAAACGGGA
AAGAATATTGTCGAGCCAGGGCGGGCCCAGGAGGGCCCGAAGGGGGGGGG
AGATCGAACAAAAAATAGCTAGAAAGTCTTCTCGGATACAGGAGAGGCGT
GGCGGGATGAGTGAAATGGTGCGTGGACTACAGCTTTTGTTGTGACCGAC
ACAGGGCAGTCAAGGCGACTGGAAGAGGGAAAACAATGTTGCGCGCTTCG
CGGCGAAGTCGCCTCCGCTGTAGAGGCCGTGCCGCTTGTCTCCGGCTGGC
GGCGGTCTCCCGTGTTGTATTGTTCGATTTCATTAGAGGATGCGGCGGGC
GGTGTGTGTGTGTCGCGACAAGCAAGCGTAGAGTCTTCGAAAGGTTTGAG
CCCTTCTCCACCTGTGTGACTTCGACTGGTTGGTGCGTTTTGCGGCGGTT
GTTGCCGGCGGCAGAGCTGGGTAGAGCTAGCGCTCGTGTCTACTCTCTGC
CCCAGTAATTCCCTTTGCAAATACAGTACTCGGTTGTGCAAGGCACTCCA
GCGGCGGCGGCGGCGGCCGTTATATCAGCAGCGTTCAATGAAAAAGCTCG
CCATCCCTTTCGCTGTGTGCGTAGGTGGCAGCCCTTTTTTTTGCGGGTCT
AGGACATTGATTACATGGATGGGTGTGTTTTGGTCAAATCCTTGTTATTT
TCTCTTCATTTTCACTCGAGAGATGGATAACGGGACGACGGCGGGACTAG
CGTGTGGGCGGGCGGGCTTGGATTCCTCCGCTCACAAACCGCCGCTGTCT
CTCGCCATCAAGGGTAGCTGGCGAGCGTCGGATTGTGTTTTTCTTGCTGT
TACAGCCGCTTGAGTAAACCACCAGCAGCACGCAGGGAAAGGCGTCCTCA
ACTGATGATGTGCTCTTTATTTTTTTTCCATTATCATCGGCGCGTGACTA
ATCTCGACACCTGGTACTCTTGGCAGAAGTATAGCGTTGCCATAGCGAGG
CGTGGGGAGAGGGGTGTCGAGAGATGAGGTGGGGGTTTCAGACTACTCAT
TGGCGTAGCTCTGGCCCGTTCTCATCAATGTAGTCTTTTGGACGTCAATT
TACGACCTCGCGCACTTAAAAATATGGCACATATAGTACATCATGAAGTC
GCGGCGACCAGGTTCAGGTGTAGTGGTGTTCGGAGCAGCGCAGTTGTCGT
GTGCGGTATCTCGTTGATTTTTCCTCGCCTTGTGTGTGGTGTAGTGTGTG
TATGTGCGCGGTTGAAAGCGTCCCCAGCCTTCTGTGGATGGCTTTGTGGC
GCGGCCGGCGCATTGCGCGTAGTTCTCAAGAGGGCTGTTGATTTTATCGC
GGAGCCCCCCCCCCCCCTGCCTGCCCACCACACCATTACACCACCACTAT
CGATCGAACTTTGTGTGCTGGACGAAAATGGCTGGAGACTTGTTGTGCTT
TCTACGCCTCACTAACCGGGACTGGACGACAAAACGGAGGCGTTATGTGA
TATATTTTTATTTATTTTTGCGCGGGTCTCCAGCGTTGTTTTTTCCATAA
GTTGAATACATCGTCGTTACGTAGCAATGCGGGTTTTGGCGGAGGGGGGG
GGGGGGCTTGGTTTCTGATGATCCCTTAATTTGTTGGGTGTGCGCAAAGG
CGGTGGTATCTTTTTAGTGTAGAATGATTTTAACGTGATCAGCAAAGTCT
TTTCTCAGTCTGGTGGTCGACCGCTCTGGGCCGGCCGCACCAAAACAACG
CTGCTCCTGTTTTTGGGGGTTCATTTTTACCTGCGTCTTTTTGTGATTTT
TTTTGTTTTTTTCCTTGATGGTGGTAGAAAGAAGAGGGGTTGTTTTTTTG
TTCTTGACCCCGCCATGTTTTTTTTCCTGCGCTTGCAGAGTCACATGCAC
CCCTCTCTCTCGCTTGCTTCCTTTCTGTTGTTGATTGGTGCTTTTCAAAT
CTTGGTGGCAAACTTAAAAAACGAAGTGTTCTTCCTGCTGCTGCTGCTGC
TGCTGCCATTTATGCTTCCGTTTATCTGTATTTTTTCAGTTAGCGCCAGA
GGTTTATCGAGCAGTACTTGTGCTTCGTTGACAAGCAGGGGACTCTCTAT
ATTTCACCCAATTTGTTGAGGTGAATTTATCCGTCTCTAAAAGCTCTACA
GCCAGCCGTAGCTGCTTTGAACGGAAAGCACCCCCATCACTGCTTTTCGG
CGTTCACAATTGCTATCAAAACCACGTGATGGCTGGGTCGATTTTTGGGT
AGAACACAGATCGATGGAAAAAAACGTATGAGTCGGTACGTGAAGCCGAG
CGAGGTTGTTGTGCACGCGGGGGCGGCGCCCTCTGCTGTTGAAGTGAAGA
AAGGCCGCGGCACAAATGCTGTACGTAGTGTCCCGTCTTCCCTTGCTTTC
TTGACTGAGCGCGGGAAGTCGCAGCGAGCGGTGATACGCGGCGGCAGATG
GTTTACATACATACGAAAAGTTATGTCGGCGGTTGCTGGGGGTGCACGAG
GTAATAGTGATCCTTTTTTTTTCCACGTCGTGGGGGAGAGAACAAAAAAA
AAAGTGGTGCAAGATTTCCGGTGTGGAAGTGACATGGGTGACGGGTTTGT
ACCCACGTGTATTGGTGACCTGCAAGTTTGATTTGCCTGCGTGAATGTGA
TGTTGCTGGTTGTTATGGTTTCATGATTTTTGTGTGAAACGAGGAAAGAA
ACTACTTCGCGTCTTCCTCTTTCGTTCGCTCTTCTCGTGAAGGCGGTCGG
TGAGGATTTATAGTAGAAACGATCGTGGGCTGATGGTCTGATGGTGACTT
GGATCATCACAAACTGTGTCGTTGTGTTTTCTTGTTGTTGTTCTTGTTGT
TGTTTGCATGTTGAGTGCGGCGAACGGAAGTCAGTCCCCCCCCCCCAGCG
CTTCTCCGTCGTTTTTTAGCGTCGAGTCCAGAGTTGGGAACTTTCTCTGC
TACTACATGGACGAAAACTTTCTTCTCTTGAACTCAGCAGAAGAAAGTTT
TAACACGACGAAAAAAGATCCTGGCGAGAGCGAAAAAAAAAGCGAGAGGT
CGAAAAGGCGAAGATGCGGAGCAAACGGACAAAAACCACACGAGCTGCAA
AAGAAGTGACACAAAATGACTGAATAAGGCACAACAATAATAGAAGAAGG
AACCTTTCGTGCTCATTTTTCGGATTTCATTTTTTGAGTCAAGTCACGGA
AGAGGAGAACTAGTAGTGAACTATACAGTAAAACAGTAACCATAGGGAGG
CCTGACTCGGGGGAGGGGGGGGGTGCCTGCAGGTTTCATTCGGCGCGAAA
TCGCCCCCCCTGCAGGCCGTGGCAGTAGTGGTGGTGGACACGCGAACACT
GCATATTTTGTGTTTTGTATGTGTGTTGTGCATGCTGCCCTCCTTGCCTT
CAATGCACCCCAAAGAGAACGGGCAAAAGTGGCACGCAGTTCCTTGTTAT
TCTTAAGTGTGTTTGCTGCCTGTTGTTCTTTTGATTCATTGGTCTTTATT
TATAGCTCGCTCAAGCCGACAAAAGAGGCGAAGAGATGGGCGCTAGAGAG
GGTTTGCAAAGTGGGAGGGGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig6:425091..434612- >mRNA_P-littoralis_Contig6.115.2 ID=mRNA_P-littoralis_Contig6.115.2|Name=mRNA_P-littoralis_Contig6.115.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2094bp|location=Sequence derived from alignment at P-littoralis_Contig6:425091..434612- (Pylaiella littoralis U1_48)
ATGCTCAGCGCGGCCAACTTCCCGCCCTTGCCAGGGTCGGATGGCGCGAC
GGCTGGATCTACGCCGGCGACGTCGCCGGCCTCCTCTGCAGCGGCGGCTG
ACGCCGAGCAGTCGGCTGCATCGTCGGGGGTTGAAGATGTCGCCGAGGAG
GGCTCAGGTTCGGCGGTAGCACCAGCAGCTACCGTGGCGGGGGGCGCTGC
GCCCTCGGCGGCAAACGCTCCCACCGAGGCATCGGAGAACACTGCGGCGG
CACCGGCGGGTGGCCTGGGGTACCCCGGGCCGTTTATCCAGTACCAGCCG
GACGACATCTTGAAGATTGTGTCGACCTTGTCTCAAGCCGAAGTTGCCGC
CGTACCGGGAGTGGCGGACATCCGCGAGCACGCGTTGGCGTTCGAGCCGG
AGGCTAACCTGGGGCTGCTGATGCGCCAGCGGTCTGTGTCGATCGACGAG
TGCAGGGAGCAGCTCCGCAAGGGGCGACCGGTCCACCGCGAGGGCGTGAT
ATCCGGAGCAGTCGATTACGGCAGCTACATGTACGGAGAGGGTCACGACC
CGCAGCAGCAGCAGCAGCAGAGCGGCGGTGGCCAGTTGGGGCCGGCGCCA
AGAGGGGGCGGCGGAGAAAGTTACGGTCAGCGGGGTTCGGGAGGAGGGGC
GGGTGAGGGTAAGAAGAAAGGGGACAGGAGTCGCAGGGAAAAGGGAGACA
GAACATCGTCTGATGACAAGGCGCGGAGCGAGGACAAGTCCAGCAGAGGC
AAGGGTGTCATTGCCGCACCAACAGCGTCTTCTTCGTCTCCGGCGGCAGC
AGCACCAGAGCCTATGGGCGCGTACGCGGCGGCTCTGCTCAAGAAGCCCC
GACAGGCGGCGCGACCGCAGCAGGCGGCCTCGACCACCGCCAAGCCCTCC
CCCGCTTCTACGAAGCTTTCCTCGAGCAAGTCGTCGGGCAAGGACAGAAA
GAGCGGCGGCAGCGGCGACAACAAGGGAAAGGACGGCAGCAACGGTAACA
GCAGCAGTAGCGGCGGATCGGGATCCGGCGCGACGGGCGGCGGCTCGTCA
TCGTCTGCTAGTGGCAAGAATGCGGCGGCGTCATCGGCAGGGGGCTCCGC
TGCTGCTACCGCACGAGGAGCCGGGTCTCAAGGCAAGGACTCCGCCGCCG
TGAAGGACGGTGCGGCAAGCGGCGGCAAGGGGAAGGGAACCGGCGTTCCG
GCGTCGTCAACGGCGGCGGCGGCGGCGGCGGCGGCGACAACGGTAGCGGC
AGTGGTGGGTGGAAGCGCACCTCCACGGCCAACACGAGGCTGGGAGAAAC
CAGAGGTCACCCAGCAGAAGCAACGCGGGTGGAGTAGAGGCAGCGACGCG
GGAAGCAGGGGGAGCGGCAAGTCCGCCGCGGCAAAGTCGGGTCCCGCCCC
CGGAAGCTCTGCCGGGTTAGAAAACAAGAAATCTCCGTCGACGACCGCCT
CAGTCTCCGGAGATGAAGGGGTCGGAGATTCAGTGACGGACTTGTCGGCT
GAGGGGTCGGAGGGCAGCGGCTCGACAGACGGGGGCAGTCGTAGCGGAGG
CAGGAATCCCCCGAGCAGCAACAGCAGCAGCAGCGCGGGACCCAAGGAGG
GACCGGCGGGCAGCTCTCCAGAGACCTCTTCAGCAGCACCAGCAGCCGCG
ACAACAGCGGCGGCGGCGGCAGAGGAAGCGTCTTCGGGATCCGCGAAGAG
CGGGGCGGCGGCAGAACAGGGTTCGGCGGCGGCGGTTGCAGCCGCAACGG
CTGACACTGGGTCTAGTCCGTGGGGAGGGAAGAAGTCCTTCCTTGATGTC
GCCAAGGCCCCGGGAAACCCGCCGCCTCCCCTCGCCACGAAGCAGCCGTC
TTCGTCCTCGTTGTCGATGAGCAACAACAAGGGCGACCGCACGGCGGTAG
CGAAGTCTCCTCTGCGGGGACGCCCCGAGCCTCCCAGCGGGGAGAGCAGG
GACATGAAGAGATCGGGCGGCGGTCAGAGAGGGGACAGAGACGGCGGCTC
GTACCACAAGAGCGTCGGGGGGGGCGTGAAAGAGCGCCTGCCGAACGGGA
GGGCTGGTGCCCCCCCCCCCCGTGAGAAGGGAGCGTGGGCTTGA back to top
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