mRNA_P-littoralis_Contig6.112.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig6.112.1
Unique NamemRNA_P-littoralis_Contig6.112.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig6.112.1 vs. uniprot
Match: D8LL20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL20_ECTSI)

HSP 1 Score: 1065 bits (2754), Expect = 0.000e+0
Identity = 644/926 (69.55%), Postives = 697/926 (75.27%), Query Frame = 2
Query:  134 MQLVLRSASLYPXXXXXXXXXXXXXXXXXXXXXXXTASVVACELMAVSESLDLAMLFRSNMICAVSLLDVPDAATPAAXXXXXXXXXXXXXXXXXXXXXXXXAGEEDPFNIVSFSANCEPRPGDDVIPSDSIPSKTPIKGLEFSPSGHSLLIWGESYVAVARLPRGSGSSGSSRSNISGVGNPTP---------NKYSSXXXXXXXXXXXXXSARWKWTLVDMSGYTVDVMRQRIVQASWHPASDSCVTLLTVGKGDVYVAVAKAGAKAFVMLHVPGRERPEQVLPIPDGSSLSPPVAFAHSHCAGWQRFAVWIARKDGSVGALCPVVPQSAKVDVEELWDLWSATSDTLVAARWEQXXXXXXTGLGSSQQESALAEEVSRLEQQQAWLRETFPHVFDAQDRGGTAAG-PAG-ALATRTPRHLVLQDRILAGRPEEDASAGPACGLVVLAGVGGGEGGDADEAAVAAPPPVALAVAYRAGCVDIALVPAGIGPRRWSERAGQRVSCATAA-----GETTAAAGAVLESLDLAERVTDKTARRRQGLSLSVSAGA-WTFLAATPCRLTSITVTWAGRIEMAAQRARQRAAAAAHGVSRSTE--RLDGDLRALLRERPDSAVNEVLFLPSSSAGRVVGVVPVASPIVGHLAMARLAGGKVEMVNLAVMTLQATEVASAAKRAEAQESPGRGDMLPRFETALQKAVNALDERRMAEPLGSSVGHLLMSQLDQEGVGVVEEQADRLVDGGIVVLEKLHLKTSTRLETLCEVYEHQAGLTKGLAKEVARLRSGQEDRAVTLEEINDMADEQRARSAGVLAVVQATRPDVSPAERAFMSEMKEMENYADRQQVMMEPATKQVEELRLAEEEAEDYLVREAQG-------TGLSERETRDVWNMLQADKERILNLSRRMEAARDRLAKLGVRE 2833
            MQLVLRSASL+P XXXXXXXXXXXXX         TASVVA ELMAVS  L LAML RSN I AVSL+DVPDAA  A                           E+DPF+ VSFSA+C PRPGDDVIPSDSIP KTPIKGL+FSPSGHSLLIWGESYVAVARLPR + ++G S     GV   TP                           SARWKWTLVDMSGY VDVMRQRIV A+WHPASD CVTLLT GK DVYVAVA  GAKAFVMLHVPGRERPEQVLPIPDG ++SPPVA AHSHC GWQRF +WIA+KDGSVGALCPVVPQ+AKVD EEL  LWSAT DTLVAARWEQ           SQQ+SAL EEV+RLEQQ+ WLRETF HVF  QD  GTAA  PAG AL  RTPRHLVLQDRILAGR  E+A A  ACGL VL GVGG                V LAVAYR G VDIALVPAG+ PR WSERAGQRVSCA AA     GET+   GAVLESLDLAERV DKTARRRQGLSLS    A WT LAATPCR+ S+TVTWAGRI+ AA+RAR+RAA    G + S+   RLDGDLRA+LRERPDS VNEVLF+P  S+GR+VGVVPV SPIVGHLAMARLAGG VEMVN+ VMTLQATEVASAAKRAEAQ++PGRGDMLPRFE ALQKA   + E +   PL  + GHL MSQLDQ+GV VVEEQADRLVDGG+VVLEKLHLK S RLETL EVYEHQ+GL KG A+E+A LR+GQED+    EEIN MADEQRARSAGVLAVVQATRP+VSPAERAFMSEMKEMENY DRQQV +EPA KQVEEL +AE EAED+LVREAQG        GLSERETRDVWNMLQAD+ERILNL RRM+ A  RL +LGVR+
Sbjct:    1 MQLVLRSASLHPPXXXXXXXXXXXXXGA-------TASVVASELMAVSAGLHLAMLCRSNTIRAVSLMDVPDAAAHAPSSGSIRTPSSAQQRR-----------EDDPFHAVSFSADCAPRPGDDVIPSDSIPPKTPIKGLQFSPSGHSLLIWGESYVAVARLPRSARTTGGSNP-THGVPPATPFLSPPRDLTASGRRRGTAGGDGTSGDKSARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLTAGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGT----DSQQQSALDEEVARLEQQKGWLRETFSHVFYGQDNDGTAAAVPAGGALVARTPRHLVLQDRILAGRTGENAGA--ACGLAVLQGVGGXXXXXXXXXXXXXXX-VVLAVAYREGWVDIALVPAGVSPR-WSERAGQRVSCAAAAAGGSGGETS---GAVLESLDLAERVEDKTARRRQGLSLSAGGSASWTLLAATPCRVASVTVTWAGRIQRAAERARERAAQDRPGTNSSSGSGRLDGDLRAVLRERPDSQVNEVLFVPRCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVGVMTLQATEVASAAKRAEAQDTPGRGDMLPRFEAALQKAKKDIGELQANRPLALAAGHLKMSQLDQKGVRVVEEQADRLVDGGVVVLEKLHLKMSRRLETLTEVYEHQSGLVKGTAREIASLRNGQEDKTEWAEEINGMADEQRARSAGVLAVVQATRPNVSPAERAFMSEMKEMENYTDRQQVKIEPAAKQVEELCMAEREAEDFLVREAQGLGTGGRGAGLSERETRDVWNMLQADRERILNLVRRMKTALARLDELGVRK 896          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL20_ECTSI0.000e+069.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:411470..423039 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog29730.Gorai.011G286200.1
PFAMsNup88
Model size3850
Max annot lvl35493|Streptophyta
KEGG koko:K14318
KEGG TC1.l.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000055,GO:0000056,GO:0002376,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006952,GO:0006955,GO:0008104,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009627,GO:0009814,GO:0010467,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0017038,GO:0022613,GO:0031503,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033365,GO:0033750,GO:0034504,GO:0034613,GO:0042254,GO:0042886,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045087,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051707,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0098542
Exons12
Evalue3.83e-05
EggNOG OGsKOG4460@1|root,KOG4460@2759|Eukaryota,37MVC@33090|Viridiplantae,3GFG1@35493|Streptophyta
Descriptionnuclear pore complex
Cds size2754
COG categoryUY
BRITEko00000,ko00001,ko00002,ko03019
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791235.8028715-UTR-P-littoralis_Contig6:411469..4115571680791235.8028715-UTR-P-littoralis_Contig6:411469..411557Pylaiella littoralis U1_48UTRP-littoralis_Contig6 411470..411557 +
1680791235.9322286-UTR-P-littoralis_Contig6:422031..4230391680791235.9322286-UTR-P-littoralis_Contig6:422031..423039Pylaiella littoralis U1_48UTRP-littoralis_Contig6 422032..423039 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791235.8132124-CDS-P-littoralis_Contig6:411557..4124241680791235.8132124-CDS-P-littoralis_Contig6:411557..412424Pylaiella littoralis U1_48CDSP-littoralis_Contig6 411558..412424 +
1680791235.821966-CDS-P-littoralis_Contig6:414437..4146051680791235.821966-CDS-P-littoralis_Contig6:414437..414605Pylaiella littoralis U1_48CDSP-littoralis_Contig6 414438..414605 +
1680791235.8321307-CDS-P-littoralis_Contig6:415170..4152631680791235.8321307-CDS-P-littoralis_Contig6:415170..415263Pylaiella littoralis U1_48CDSP-littoralis_Contig6 415171..415263 +
1680791235.84093-CDS-P-littoralis_Contig6:415600..4156901680791235.84093-CDS-P-littoralis_Contig6:415600..415690Pylaiella littoralis U1_48CDSP-littoralis_Contig6 415601..415690 +
1680791235.849478-CDS-P-littoralis_Contig6:416116..4163911680791235.849478-CDS-P-littoralis_Contig6:416116..416391Pylaiella littoralis U1_48CDSP-littoralis_Contig6 416117..416391 +
1680791235.8578916-CDS-P-littoralis_Contig6:416720..4169791680791235.8578916-CDS-P-littoralis_Contig6:416720..416979Pylaiella littoralis U1_48CDSP-littoralis_Contig6 416721..416979 +
1680791235.866464-CDS-P-littoralis_Contig6:417876..4181191680791235.866464-CDS-P-littoralis_Contig6:417876..418119Pylaiella littoralis U1_48CDSP-littoralis_Contig6 417877..418119 +
1680791235.8755774-CDS-P-littoralis_Contig6:418771..4188521680791235.8755774-CDS-P-littoralis_Contig6:418771..418852Pylaiella littoralis U1_48CDSP-littoralis_Contig6 418772..418852 +
1680791235.8846061-CDS-P-littoralis_Contig6:419336..4195161680791235.8846061-CDS-P-littoralis_Contig6:419336..419516Pylaiella littoralis U1_48CDSP-littoralis_Contig6 419337..419516 +
1680791235.8972454-CDS-P-littoralis_Contig6:420214..4203671680791235.8972454-CDS-P-littoralis_Contig6:420214..420367Pylaiella littoralis U1_48CDSP-littoralis_Contig6 420215..420367 +
1680791235.9079995-CDS-P-littoralis_Contig6:420849..4209661680791235.9079995-CDS-P-littoralis_Contig6:420849..420966Pylaiella littoralis U1_48CDSP-littoralis_Contig6 420850..420966 +
1680791235.920287-CDS-P-littoralis_Contig6:421803..4220311680791235.920287-CDS-P-littoralis_Contig6:421803..422031Pylaiella littoralis U1_48CDSP-littoralis_Contig6 421804..422031 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.112.1prot_P-littoralis_Contig6.112.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig6 411558..422031 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig6.112.1

>prot_P-littoralis_Contig6.112.1 ID=prot_P-littoralis_Contig6.112.1|Name=mRNA_P-littoralis_Contig6.112.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=918bp
MDITPRRAVSSAATQMQLVLRSASLYPPPTTSLDAAAASSGGGGGGGSGG
TASVVACELMAVSESLDLAMLFRSNMICAVSLLDVPDAATPAAAAAAARA
PSSTSTSTRTPQRQRQRAGEEDPFNIVSFSANCEPRPGDDVIPSDSIPSK
TPIKGLEFSPSGHSLLIWGESYVAVARLPRGSGSSGSSRSNISGVGNPTP
NKYSSGDGSSSSSSSSDKSARWKWTLVDMSGYTVDVMRQRIVQASWHPAS
DSCVTLLTVGKGDVYVAVAKAGAKAFVMLHVPGRERPEQVLPIPDGSSLS
PPVAFAHSHCAGWQRFAVWIARKDGSVGALCPVVPQSAKVDVEELWDLWS
ATSDTLVAARWEQQQQQQQTGLGSSQQESALAEEVSRLEQQQAWLRETFP
HVFDAQDRGGTAAGPAGALATRTPRHLVLQDRILAGRPEEDASAGPACGL
VVLAGVGGGEGGDADEAAVAAPPPVALAVAYRAGCVDIALVPAGIGPRRW
SERAGQRVSCATAAGETTAAAGAVLESLDLAERVTDKTARRRQGLSLSVS
AGAWTFLAATPCRLTSITVTWAGRIEMAAQRARQRAAAAAHGVSRSTERL
DGDLRALLRERPDSAVNEVLFLPSSSAGRVVGVVPVASPIVGHLAMARLA
GGKVEMVNLAVMTLQATEVASAAKRAEAQESPGRGDMLPRFETALQKAVN
ALDERRMAEPLGSSVGHLLMSQLDQEGVGVVEEQADRLVDGGIVVLEKLH
LKTSTRLETLCEVYEHQAGLTKGLAKEVARLRSGQEDRAVTLEEINDMAD
EQRARSAGVLAVVQATRPDVSPAERAFMSEMKEMENYADRQQVMMEPATK
QVEELRLAEEEAEDYLVREAQGTGLSERETRDVWNMLQADKERILNLSRR
MEAARDRLAKLGVRELE*
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mRNA from alignment at P-littoralis_Contig6:411470..423039+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig6.112.1 ID=mRNA_P-littoralis_Contig6.112.1|Name=mRNA_P-littoralis_Contig6.112.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11570bp|location=Sequence derived from alignment at P-littoralis_Contig6:411470..423039+ (Pylaiella littoralis U1_48)
TACAGGTTCATCCACTTCACACACTACAGCAGTGCTCCATCATTCTCTCG GGTAGAGCAGGCTTAGCAGGAGATACGACGACGTCGCAATGGACATTACT CCGCGGCGTGCGGTATCGTCCGCGGCAACCCAGATGCAACTCGTGCTGCG AAGCGCATCCTTGTATCCACCGCCCACCACTAGCCTCGATGCTGCTGCTG CGTCTTCGGGCGGCGGCGGCGGCGGCGGTAGCGGCGGCACGGCGAGCGTC GTCGCCTGCGAGTTGATGGCCGTCAGCGAGAGTCTTGATCTCGCCATGCT CTTCCGGAGCAATATGATTTGTGCCGTCAGCCTTCTCGACGTTCCCGACG CTGCCACCCCAGCAGCAGCAGCAGCAGCAGCACGGGCTCCCAGCAGCACC AGCACCAGCACCAGGACGCCACAACGACAACGGCAGCGGGCAGGAGAAGA GGACCCTTTCAACATCGTATCCTTCTCCGCCAACTGCGAACCGAGGCCGG GAGACGACGTTATCCCCAGCGACTCCATCCCGTCTAAAACGCCCATCAAG GGGCTAGAGTTCTCCCCCTCCGGCCATAGCCTGCTCATCTGGGGCGAGAG CTACGTCGCCGTTGCCCGCCTGCCGCGCGGCAGCGGCAGCAGCGGCAGCA GCCGCAGCAACATCAGCGGCGTCGGTAACCCAACGCCAAACAAGTACAGC AGTGGGGACGGTAGCAGCAGCAGTAGCAGCAGCAGCGACAAAAGCGCTAG GTGGAAGTGGACGCTGGTGGACATGTCGGGGTACACCGTGGACGTGATGC GGCAGAGGATCGTGCAAGCCTCCTGGCACCCGGCGAGCGACAGCTGCGTG ACGCTGCTGACGGTCGGGAAGGGCGACGTCTACGTCGCCGTCGCGAAAGC GGGGGCCAAGGCGTTTGTCATGCTGCACGTGCCGGGCCGCGAGCGGCCAG AGCAGGTTGGTCATACGCGTGCGTGCGGCTGTCATGGGTATATAAAAGGA GACGGCAAGAAAATAAAATGATCATGCCTCCAACCAAATCTGGTCATCAT TTGTTTGGTCAGTAACGTGTAAATGCACCTCGTACCATGTGCGGGAGGAC ACGATAATGGTACGAAGTACTTCGTATCCACCATATCATACTTGTACCAT ATCATTCTTTGAAAGCAATCCGACGAATATCGTCGGCGTTGCTAGTCCCA AGCTGCTTTTTTTTTTTTTAATAAGCTGCAAGTAACACGGTAGCATCTAG CGGGGAGATTTTCAGGACGACGTCGAGCAGACTCCCAGGGTACTACCTCA TCTTTCTGCTTCTCAAGCATCAACGCTGACGTGTCTTGACTGCAGTGGCC ACACGTTTCAGTCCCCTTTCAGTCCCCTGGGCTGAAGGGGCGGGGAACTA GATGAGAGCAACATACTTGAGCGCGCTCAAGCATGTTGCTCTCACCTAGT ACGTGTGGCCACCGCAGTCGAAGACGCGTCAGCGTTGATGCTTGAGAAGC AGAAAGATGAGGTAGTACCCTAGGAGTCTGCTCGACTTTGTCCTGAAAAT CTCCCCCACGTACCATATCATACAGCAGAAATCTGTAGTTTGGAATTCAC TCACCTCTCAAGTCCACGGCATCTCCGTGTCAAACACTTGTACCATGGCC CCTGCCCATGGCCGACCTTACAGCTTATTGAGCTAAAACACACATTTCTG TACCAGGATGTTGTGATACGCAAATGTTCCAGAATTTGACAGCCATGTGG ACATTCAACTCAAAAAACCTAAAGTGGCAGCATCGTGCCCAGACGCCCGC GTCACGAACGCAACTACTGCTTGCAGCCGCAACGCTCCGTTACAAATCGG ACCAACACTCGAAAGGATCCACACGGGCGTAGAGCAGGTTCTCCTACAAA TATACGAAGTACAGAAACACTGTGCTGCTGCCTTTACGAAAAACGTCTTT TTTTTTACCGGCAAAATTCGTCATCGCACGGAGTCCCCAACCTCCATTAT CCTGTGACACATCAAATCATCCTGCTGGTTCGCCGCCTGTAGTGCTGATC CAAAGTTGTACCAGCATTTTTGGGTGGTTTATCCACCACGCTACACACCC TCCGAGTTTCAGCTGATTTGGTGAATTCTACGAGTGATCAACGTTGATCT ATAGTTTTGCACGAAACGATGAAATGTTGGCTACATTTTCGGAGGTAGAC ATATTGTTATTCTTGGTTCAAACTCTTACCTAGTACAAGTAGACTGGAGC TCAGACTAGTCTCGGTCGATTTTTAGGCAACTTTTATAGGCCCATGGTCA GCGCTGTAGTGCTGATCCCAAATTCACACACTTTTGTTGGGTAGTACATC CACCAAGGTACACCCCCTGCGAGTTTCAGCCAATTTAGGCATCGCCACGA GCAATCAACCTTAGCGCGAAGTTTGTCTCCCGAGAGCTTAAAACGAGCTC TGGACGCAGAGAAAAATGGCTTGCTTCCAGTTGCGATGGCGCAGCATTCC TGCAGTTTGAAGCAAAACCAAAGCATATAAACTACTGGAGAAGGTATTAT AGAACACGACCCTTTTGAGACCCCCTGTCGATATCGTAGCAAGCCGGGGT CTGTGTGAGGAGCAACACCGGTGACAAAGGTCATGACTACGAATGGAGTC TGCATCACAAATTCACAAATCTGAGAGGGGCTCAGGGTTTCGTCACGTGG TACCCGCCAGAAGCCTTTGTCGGTATACAAAAAAAAATCAAAGCAGCATA TGTGGTAATATCATGTGGAAGCAAAAAATCAAAGAGCCTGCTCCTGTTGC ACATGGGCTAGCTTTGGCGCTCTTGTCTTTGAAATGAAGGCACACAAGCA CGCGTGCAAGCGCACGCGCACGCGCGCACACACACACACACACAAAGAAA CACGCCCCGATGTACACACACACACATAAAATTTACATACTCACGCTCGC ACGGGCGTACACATTCAGGTGTTACCCATTCCCGACGGGTCTAGCTTGTC TCCCCCAGTCGCGTTCGCCCACAGCCATTGCGCCGGATGGCAACGCTTCG CTGTGTGGATCGCGAGAAAGGACGGTTCGGTGGGCGCTCTGTGTCCCGTG GTGCCACAGAGCGCCAAGGTGGACGTCGAAGAGCTGGTGAGCTGAGCCGG ACTAAGCCGAGCCGGGCGTTGAAAGCAGATGACCGGCGCTTAACGTCTGT AGGGTATCATCAAGTCTTGTGGTACCGCTGCACTCCTTTCTTGTGAGGAT TTCACCGAATGAGGCCCGCAGTTAAAGCCAGTTTTGACACCTGCCGTAGT CTGTCAGCGGTTTCGCACAACCCGAGAGAAGGTTTGGAGCACTAGAGTGT TTGTTTGTGTTTTGGTGGTTTTGTGTTGTTTGATGGTTGCACTGTTACTG CTGCTGCTGCTCCTGTCGGAAGGTTAGCACGCCTGGGGTGTAAACCGCTG TTCCATCCGTGTGTGCTGCTGTCTTCTTCTGGCTGTCTGTCTGGCTGGCT GCCTGACTGTCTGTCTTTCTGGCTGCTGTCTGTCTGGCTGTCTGCTGACT GGTTGTCCGTCGCATGATTTGGCACCTCGCATACGTGCATGAGAAACTCG AGTTCGTCTTGTTGGTGTGCTACGAACTAATGTATGCTTACAGTAGCCCG TGACAATATTCAACCGATTGTGCGCACGACACGTCCTCTCGTATTGCCCA GTGGGACTTGTGGTCGGCGACATCGGACACTTTGGTGGCCGCCCGATGGG AACAGCAGCAGCAGCAGCAGCAAACCGGGTTGGGCAGTAGCCAGGTATGC ATTTTTTGTCATTGCGTGTTGTTGCTGTTTTCGCCGTTCTGAGACGGGGA AGACTCGAACCCGGGGGGGGGTAGAGTTGGATGCCGCTGTGCGACTATTG TTTTGCTGTTGGTTGTTGTGGCGGTGTTGACAGTGTTGTTGTTGCCCGCC TCGTCTCTTTCGGTGTATGATTATGGTCGGAATGAGTGCCCGGTTAGACT ATATTTCGTGTGTTTTGCATCCAGCTATTACAGACAGACATAAAACACCC TTTCTAGCGCCATCGTCCTTACCGCCACCGCCACTACCGCTGCCGCCGCC TCACCCTGTCGGGGTCGAATCCTCACGGGAGCAGGAGAGCGCACTCGCGG AGGAGGTGTCGCGACTCGAACAACAGCAGGCGTGGCTTAGGGAGACGTTT CCCCACGTGTTCGATGCACAGGTGAGCGAAAAATAATTTGCGGAAAATGG TGTGTGTGTGATGTTGGTTGTACGATTGACCGTGTAATGAACGGGAAGGC CAGAAAGCACTGCATAAGGATGTCAGGGGAGGGAGCATCACCCCTGGATA GAAGCCCTTCGGTCTGCCTAAGGTCTGAGACATGTCACAAGGAAATAGAT GATACGGTGGTACCGGGTGGGCTTTTATTTCGGGTGTTTTGGGGGAGCAC AGAAACCAACTGCGGGCACATGATGCCACATTTGTGATACGTACAAAGAT ACGCGACGGCCATGAGCACGTTGGTATTCTCTCCTCGTTTTCTTGTTAAC GTTTGACGAAGTTGATCGACCGGCCAGGTAACCCTCACGTTCAAAAAAAG ACTTCCGATCGAACCCGCAAAAACCTCGCCCACGCTCGCCGAAACAGGAC CGAGGCGGCACAGCAGCAGGGCCAGCAGGGGCATTGGCCACCCGAACCCC TCGCCATCTCGTCCTCCAGGATCGCATTCTGGCCGGGCGACCTGAGGAAG ACGCCAGCGCCGGCCCCGCGTGCGGCTTGGTCGTGCTCGCGGGGGTGGGC GGGGGCGAAGGCGGAGACGCCGACGAGGCGGCCGTGGCTGCGCCGCCGCC GGTTGCGCTGGCGGTGGCGTACCGGGCGGGGTGTGTAGATATTGCCCTGG TGCCGGCAGGGATCGGTCCCAGGTGCGCGGTATGATAGCAGCGGTGGTAG TTTGTGTGCCTGTGTACTTTGTATTTTGTGCGTTGTGCTTCTGCTTCTGC TGCTGCTGCTGCTGCTTTGCTGTGGTGTAACTGTCCATGGCGTACCAGGG GGGTTGGTTTGTGTAGAGGTTGCGCTAATGGGTTTGCGGGGACGTTGATG CCCTCCCTCTTCCCCTCTGATCTTCGAGCGCAGCAGCCAGCTTGCCGTAG CCCCGCCCCCGCCATTTCCTTTTGATCATATCATACCACCCTTGACATCC GTGATTCGACTCCCGCCATAAAAAAAAACGACAACAAATAACCCCCCGGA GAAGGTGGTCCGAACGCGCTGGCCAGCGAGTTTCTTGCGCGACTGCGGCA GGGGAGACAACGGCCGCCGCCGGAGCGGTGTTGGAGAGCCTGGATCTAGC GGAACGCGTGACGGACAAGACTGCGAGGAGAAGGCAGGGCCTGTCGCTCT CCGTGAGCGCGGGGGCATGGACGTTTCTCGCCGCCACCCCCTGCCGGCTG ACCTCCATCACGGTGACCTGGGCGGGGCGGATCGAGATGGCGGCGCAGCG AGCGAGACAGGTGCGATGCGATGCGATGCGATGCGCTGCGCTGCGCTGCG GTGCTGCTGTGTGGTACTTTTGACCTTCTCGCCTTCTTGCTTCCTCCCCC TCCCTCATCCCTCTCTCTCTCTCTCCCTCTCTCTCTCTGCAGCGCGTGTG TTCACATCCTGTTGTTGTTATTCATGATTGTTTTCTCCTTGTCGCGTCTC CACAGTGTCTCCCTTCGGTGTGTGTGTGTGTGTGTGTAGCTTGCTGCCCC CTTGTATGTATTCTCGTTCATGACATGACCGCTCGGTGGGTCCGAATCTC CTGCTCTGGACTCTCTTCTGGGCTTGTGTTGGCTGCTGATGTTGTCCTTT TCTTGCTACCCGTCCCGTCTGGCTCTCCGGCCGTTTTCTTCCATCTAGAC GGTGATTTCTTTTTCGAGTCGTGTCTTCTTTCCTGCTGTGTCTCTCCGTG CTCCCGACTATCTCTCCTTGTTTTTTTTGTTGCGCACCCTGTCCTCGTTT TGTTAGCCTTTGCGCTCTAACCCCCTCTTTCCCTGTCTTGTACACACACC GCAAGAGGTGTCGTGTGCACACATCATATCATATACACATGCGAATGACG CAACATGGGTGTCCCTTCTTTTTTTTCTGCACACATCAACTTATCTTCTC CACGTGCACTACACTACGCACATGATCGAGTGTTTGTATAAAATGTTGAA CCCTTTCCTGGTTTTTTTTTTTGCTCTCTTCTTGCACTTTTATCTTTTAT ACCCCGTTCTTGTTTTCTCCACGTAAAGCTTCGTTTTGTTGTCTTCGTCT TCGTTCAACCTGTTCCTCCTTCCCCCCTTTATTCTCCTCCTCTTCCTCCT CCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC CCCGAAGCGCGCTGCCGCTGCCGCGCACGGAGTGAGCCGCAGCACCGAAC GCCTCGACGGGGATCTACGAGCTTTGCTTCGCGAGAGGCCCGACTCTGCC GTCAACGAAGTCTTGTTCCTGCCGTCCTCGTCGGCTGGCCGGGTTGTCGG TGTCGTTCCTGTGGCCAGCCCCATTGTCGGGCACTTGGCCATGGCGAGGC TGGCGGGGGGGAAGGTGGAGATGGTCAACTTGGCCGTTATGACGCTGCAG GTAAGTCAGGCCTTTATTTGTGTGCGTGTTTTTATAGGGGGGGGGGGAGA TAGATTTGGTGTGGTAGTAAGCGTCTGTTGGTATCATTTATGACGAAGCG AACATGCAGGTTCTGATACGCGCAGGAAATCGGGCGGGTTTGTTTTATTG CTGTTGTGGTCGCTTAAGGGGGCGCTGGCTGCGACAAGACGGCAAGAGTG CTTCGCGACCGAAACGCCCACGAGGAAATGCTTGTTGCTGCCGCTGTTGT TTTAGTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCCTATTCCTGTTCCTG TTCCTATTCCTGTTCCTGTTCCTGTTCCTGTTCTTGTTGTTCTTGTTCTT GTTATTGTCATTGCTGCCTTTTCGGAAGTCTCTCGTTGTTCCTGTTGTTG TTACTGCTGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTACTTCTTCTTTC GTCGCTGTTACTGAATCGGTTTGGACGACTGTCGTTGGTTGTCTTGCCTG CCTTGTCCCTCATCGTCCTCGTCTCTCCAAGTGTAACCTAACCAGACACG CACGCACATGTTCCCAACCCTGCTCCATCACCTCCCGTCCGACACGCTGT TTTCTCTCGATTTTGGCCGTTTTTTTTGGGTTGGGGTCTCTGCATGACCC AGGCAACCGAGGTGGCCTCTGCCGCCAAACGCGCCGAAGCCCAGGAAAGC CCAGGCAGGGGCGACATGCTCCCCCGCTTTGAGGTGGGCCGCTTGCTTGC CCACTGTGCCGCGTAAAACATTAGTCCAGATGTATCCGTTTACAAGGGCT GAGCAGGGCTAATCGTTGACTCCCGGAACGATGTTTCGGATGCGGGTGAC AGGCTGTAAATGCCCCTCCCCCCCCCCCCCCCCCCCCCCCCGATCTTTAT TTCTCCGTCTCGGTCTTGCTTTTGTCCTCTCGCTTTTCTTGTCTCTTTCT CCGTATCCCCCAACCCCGCTCTCTGTTCTAGCCCTTTCTCTCGTATCTCT CTCTCGTATCTCTCTTCTCGTAGGCTAAGGACACATTAAAGGTCCGTTCG TTTTTGCCTCGTGCTCGTCATGTACTGCTGTACAAAAATACACGAGTTTC TCCATTTACTTGTTATCCATCATCATCATAATATCTCCCCCCTCCCCCCC CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCATTTATCTGTG TATCTATCGCTACTCAGACCGCGCTGCAGAAGGCGGTGAACGCGCTGGAT GAGAGGCGGATGGCCGAGCCGTTGGGTTCCTCCGTCGGCCACCTTCTCAT GTCGCAGCTGGACCAGGAGGGCGTGGGCGTCGTGGAGGAGCAGGCAGACC GCCTCGTGGATGGCGGCATTGTCGTCTTGGAGAAGCTGCACCTCAAGGTG TGCTCCGTATCATACGAACCAACCACACGGTAATTTGTGTACTCCGTCTA TCGAGACGAACCACGACGGTTGTTTCTTCCTCTTTTATTTCCCCATTTCA TGGGAGCGGTACGGCGGCACCGTCGCCTAGGAGAAGCCGCACCTCAAGAT AACTACGTACCTGTCTTAGCCACGCATTGCTATTTTTCCATCCCGTGATA CGTGAGGTGTGTTGCACCGCTCCTACGACAACCTTGCCCCTTCCGGGCCG ATTTTTGGATCGATTCGATTACTCGCCTGGGCCCCCGAAAATATCTAAAA AATGTGCCTTTTTTTTTTCCAGGATTCATTTTGTAGCTCTGAATCTTAGG TTCTTTGTCGACTGCACGTAAAGATTACGATGGTGGAAAAATCGCCCAGT AATGGTTGCTGTGCTACCAATGGAAGGAATTAATACATTTGTGGGCACGA TGGTTGTGACTACAGCAGTAAACCGGAGGGGGAGGGTGTAATTTCCCCTG TCAGCAAGCTTTCACCACTGGGTCAGTGACCACGCGCATCTCTCGTCTCT CACCGCGTTTGTTAGACACCTGTTATGCGTAAAAAATATTTCGTATCTTG CAAATTTTGACTGAAAACGCTGTACCCCCCCCCCCCCCTTCTACCCCGTC CCTCGCCGTGGTGGTCATTCCCCCCCTCCCCCCCCCTTGACGTAGACAAG CACGCGCCTGGAAACCCTGTGTGAGGTGTACGAGCACCAGGCGGGCCTGA CGAAGGGATTGGCGAAGGAAGTAGCTCGGCTGAGGAGTGGGCAGGAGGAC AGGGCGGTCACACTGGAGGAGATCAATGACATGGCGGACGAGCAAAGAGT GAGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTATCATTGTTATGATTGTTGTCGTTGTTTTGTAATTT TTGTCGAAAGCAGGAGACTGGGTGTTACTTCTGTCCTGTTACTTCGGAGC AGCTGATGATGCAGGAGCAGCACTCATGACAGTGCAGTTGTCGATTTGTT GTCGATTTCTATGCCCAGTGATGTCGGCGTCGGCGTCGTACACACCAACT ATACAGTAGTAGACCCCCGGAGAATAGCCAGGTGGCAGATGTTACAGTAG CCAGGCGCTCGATGTCAAGGACAAACTGCTGGAATGCAAAAACTCCGATA TCGAGCTCATGATCCAACGAGCGATGGTGCAACCATCTGCCCCCCGCCTC CGTGCCCCCCCCCCCTTTCTGCCCGTTGGACTGGCTGGTTGCTGCTGCTT CGGACCTGCCGTGTTCGCCCTACCTTCCAGGCCAGGTCGGCTGGTGTTCT GGCGGTGGTCCAAGCGACGCGACCGGATGTTTCTCCCGCTGAGCGCGCGT TTATGTCGGAGATGAAGGAAATGGAGAATTACGCCGATCGGCAGCAGGTA GAGTAAAATGTGCATCATGTGCAGCATGCGTCGAATGCAGCACGCATCAA ATCAAATGCATGATACCGATATGTACGCATCAAATGCAGTACCAGTATGT ACGCATCGTGTGCCGCATGTACGCATCGTACGGAGTTCGCGTGCGCCGTT GGGAAATTGGAGGCGTGGTTTTGTGTCTCTGTTCCGTGACTGAGTGAAAG TTCTCGGTCGTTACTGAAGCTGCCGTTGAGTGACTAACGTCGTCATGTAG CTTGAAGTTTTTGTCACAAGTGAAAAAGGTGGCAACTTTCAGTTTCATTA GTGGCTAAATTTTGTTATTTGTTGCTTTGTTGTCATGTGTGACTTGAACA ATCTCTTTCGTGACTGGAGTTGCCACCAGTGACGGCTAAAGTTTTCGGTT AGGACTGAAGCTGTCATTCGTGTCGGGAAGTCGTCGACGCGTACACGAGA CGGTGGTTGATCAGTGGTTGGTTGTCGCTGAAGCAGTTTTTTTGTTACCT CCATGCTTTTGTCGTCTGCCCTATTTTCGCTACAAACCGTACACATGTAC CAGTAGGTGTTTAGACCACTTTACAACCACAGAAAAATAACAGGCAGGCA GGCAGGCAGGCAGGCACACAGGCACACAGGCACACAGGCACACATGCAGC GAATCAGGCTGTAGTATAGCATCGGCATAAAAACTCCGCCGCGACACACC ACGACAAAGCCCCCCCCCCCCCCCCCACCCCCCTCCCCTTCTCAGTTCCA CATCCACCCATCATATCACCCCTGACATCCATCCATCCTCTGCCGCGGAA ATACACGCAACAACACGATATATGATACACGCAGGTAATGATGGAACCCG CCACGAAGCAAGTAGAAGAGCTTCGGCTGGCGGAGGAGGAGGCCGAGGAC TACCTCGTCCGGGAAGCGCAAGGGACGGGACTGTCCGAGCGCGAGACGAG GGACGTGTGGAACATGCTTCAGGCCGACAAGGAGAGAATTCTTAACCTGA GCCGAAGGATGGAGGCGGCCCGCGATCGGCTCGCGAAGCTCGGCGTCCGG GAGCTTGAATAGCTGACTTCGTAAATGGTGATGATACCGAGCTAATGTTG TCATGGGCCTCATCATGTCATTTTCAGACCATGCGGTTGTTTTGTTATTT GCGAAGTTGGGTGTGATAGAAAAGAGGATGGAAAGCTGCTACACTACCGT AGTTTTTTGTGCAGGTAACGTGTTGCAGCAATATTACGGGGACAGCACTG CAAAATGGAGGTGGTACCCAGCCTTTGGTAGACCCTGCTCTCATTTTTTT GTCTGTACAGCACTATAACTGTTTTGTTTTATTTTTTCATATGTATACAT ATGCGTATGCGTGCGTAGGCATGGGCGTGGGCGTGGGTGTGGTTGTGGGC TTGGGCGTGGGTCTGGTATGCATGGTGCGTGCTTCATTTTCGTTTTTTAC TTGTGCTGCGGATTTGGGGAGCAAAAATATTGTCGGGTTTAACATTAATT GATACCAAAATATGCGGTGTAATAGGTTGACCAATCAGAAAACTGCGGGC ACCTTTTTTCTCTCTTAGCGATCAAGCACTCACTACCTGGTATCAATTAA TGTTTTTGGTGTTTTTGCCGCTGTGCTCTCTCTTGCGACGTGCTTGACAG TCGACGATCTGAGCGTATTCGCTGCACACGACTGTTGAATGATGGAGAAT TTCGCGCGCCTCGAAGCACATGGACCTTTGCGTACTAATGGAAAACGGAG CTGAAGTTCGTCCGCGTCACATGTTTTGTTTTTTTTTCCTTGAGTTTTAC TTTTTGTGTGCGAAGGCACAAAGACTGCACATTTGTTTGTACAATATTAG TGCTGTAGTTTATGTATTCTTCGATGGCTTGCGACCACGGGCTGGCTCTC GTGATGATGAGTTAAATGGGAGAAATGACAAAACATTCGAAATACAGCAT TTGTTGTTTTTCTTGATTCGGAAAAATACGTAGGATACCTGACGAGGTTG TATCATAAACCGCGACACACCACGATCAAACAATGACTCGCCGCTGCTAC ATGACCAGCTTGGGGAGAGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig6:411470..423039+

>mRNA_P-littoralis_Contig6.112.1 ID=mRNA_P-littoralis_Contig6.112.1|Name=mRNA_P-littoralis_Contig6.112.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2754bp|location=Sequence derived from alignment at P-littoralis_Contig6:411470..423039+ (Pylaiella littoralis U1_48)
ATGGACATTACTCCGCGGCGTGCGGTATCGTCCGCGGCAACCCAGATGCA
ACTCGTGCTGCGAAGCGCATCCTTGTATCCACCGCCCACCACTAGCCTCG
ATGCTGCTGCTGCGTCTTCGGGCGGCGGCGGCGGCGGCGGTAGCGGCGGC
ACGGCGAGCGTCGTCGCCTGCGAGTTGATGGCCGTCAGCGAGAGTCTTGA
TCTCGCCATGCTCTTCCGGAGCAATATGATTTGTGCCGTCAGCCTTCTCG
ACGTTCCCGACGCTGCCACCCCAGCAGCAGCAGCAGCAGCAGCACGGGCT
CCCAGCAGCACCAGCACCAGCACCAGGACGCCACAACGACAACGGCAGCG
GGCAGGAGAAGAGGACCCTTTCAACATCGTATCCTTCTCCGCCAACTGCG
AACCGAGGCCGGGAGACGACGTTATCCCCAGCGACTCCATCCCGTCTAAA
ACGCCCATCAAGGGGCTAGAGTTCTCCCCCTCCGGCCATAGCCTGCTCAT
CTGGGGCGAGAGCTACGTCGCCGTTGCCCGCCTGCCGCGCGGCAGCGGCA
GCAGCGGCAGCAGCCGCAGCAACATCAGCGGCGTCGGTAACCCAACGCCA
AACAAGTACAGCAGTGGGGACGGTAGCAGCAGCAGTAGCAGCAGCAGCGA
CAAAAGCGCTAGGTGGAAGTGGACGCTGGTGGACATGTCGGGGTACACCG
TGGACGTGATGCGGCAGAGGATCGTGCAAGCCTCCTGGCACCCGGCGAGC
GACAGCTGCGTGACGCTGCTGACGGTCGGGAAGGGCGACGTCTACGTCGC
CGTCGCGAAAGCGGGGGCCAAGGCGTTTGTCATGCTGCACGTGCCGGGCC
GCGAGCGGCCAGAGCAGGTGTTACCCATTCCCGACGGGTCTAGCTTGTCT
CCCCCAGTCGCGTTCGCCCACAGCCATTGCGCCGGATGGCAACGCTTCGC
TGTGTGGATCGCGAGAAAGGACGGTTCGGTGGGCGCTCTGTGTCCCGTGG
TGCCACAGAGCGCCAAGGTGGACGTCGAAGAGCTGTGGGACTTGTGGTCG
GCGACATCGGACACTTTGGTGGCCGCCCGATGGGAACAGCAGCAGCAGCA
GCAGCAAACCGGGTTGGGCAGTAGCCAGCAGGAGAGCGCACTCGCGGAGG
AGGTGTCGCGACTCGAACAACAGCAGGCGTGGCTTAGGGAGACGTTTCCC
CACGTGTTCGATGCACAGGACCGAGGCGGCACAGCAGCAGGGCCAGCAGG
GGCATTGGCCACCCGAACCCCTCGCCATCTCGTCCTCCAGGATCGCATTC
TGGCCGGGCGACCTGAGGAAGACGCCAGCGCCGGCCCCGCGTGCGGCTTG
GTCGTGCTCGCGGGGGTGGGCGGGGGCGAAGGCGGAGACGCCGACGAGGC
GGCCGTGGCTGCGCCGCCGCCGGTTGCGCTGGCGGTGGCGTACCGGGCGG
GGTGTGTAGATATTGCCCTGGTGCCGGCAGGGATCGGTCCCAGAAGGTGG
TCCGAACGCGCTGGCCAGCGAGTTTCTTGCGCGACTGCGGCAGGGGAGAC
AACGGCCGCCGCCGGAGCGGTGTTGGAGAGCCTGGATCTAGCGGAACGCG
TGACGGACAAGACTGCGAGGAGAAGGCAGGGCCTGTCGCTCTCCGTGAGC
GCGGGGGCATGGACGTTTCTCGCCGCCACCCCCTGCCGGCTGACCTCCAT
CACGGTGACCTGGGCGGGGCGGATCGAGATGGCGGCGCAGCGAGCGAGAC
AGCGCGCTGCCGCTGCCGCGCACGGAGTGAGCCGCAGCACCGAACGCCTC
GACGGGGATCTACGAGCTTTGCTTCGCGAGAGGCCCGACTCTGCCGTCAA
CGAAGTCTTGTTCCTGCCGTCCTCGTCGGCTGGCCGGGTTGTCGGTGTCG
TTCCTGTGGCCAGCCCCATTGTCGGGCACTTGGCCATGGCGAGGCTGGCG
GGGGGGAAGGTGGAGATGGTCAACTTGGCCGTTATGACGCTGCAGGCAAC
CGAGGTGGCCTCTGCCGCCAAACGCGCCGAAGCCCAGGAAAGCCCAGGCA
GGGGCGACATGCTCCCCCGCTTTGAGACCGCGCTGCAGAAGGCGGTGAAC
GCGCTGGATGAGAGGCGGATGGCCGAGCCGTTGGGTTCCTCCGTCGGCCA
CCTTCTCATGTCGCAGCTGGACCAGGAGGGCGTGGGCGTCGTGGAGGAGC
AGGCAGACCGCCTCGTGGATGGCGGCATTGTCGTCTTGGAGAAGCTGCAC
CTCAAGACAAGCACGCGCCTGGAAACCCTGTGTGAGGTGTACGAGCACCA
GGCGGGCCTGACGAAGGGATTGGCGAAGGAAGTAGCTCGGCTGAGGAGTG
GGCAGGAGGACAGGGCGGTCACACTGGAGGAGATCAATGACATGGCGGAC
GAGCAAAGAGCCAGGTCGGCTGGTGTTCTGGCGGTGGTCCAAGCGACGCG
ACCGGATGTTTCTCCCGCTGAGCGCGCGTTTATGTCGGAGATGAAGGAAA
TGGAGAATTACGCCGATCGGCAGCAGGTAATGATGGAACCCGCCACGAAG
CAAGTAGAAGAGCTTCGGCTGGCGGAGGAGGAGGCCGAGGACTACCTCGT
CCGGGAAGCGCAAGGGACGGGACTGTCCGAGCGCGAGACGAGGGACGTGT
GGAACATGCTTCAGGCCGACAAGGAGAGAATTCTTAACCTGAGCCGAAGG
ATGGAGGCGGCCCGCGATCGGCTCGCGAAGCTCGGCGTCCGGGAGCTTGA
ATAG
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