prot_P-littoralis_Contig6.88.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.88.1
Unique Nameprot_P-littoralis_Contig6.88.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length388
Homology
BLAST of mRNA_P-littoralis_Contig6.88.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 3.280e-133
Identity = 233/357 (65.27%), Postives = 268/357 (75.07%), Query Frame = 0
Query:    1 MREERTLLVGLLAVCIVSSAALVRLIAVVRIFRRQXXXXXXXXTSNSSYNTNGDPLSHQQQQHLHQDEDAMPTPTDDDRVASSRVLVPSLLFHVLVFLCLVVEVPVYACRWLSASGIVEHFSEQGRQLYSLHMTSFLLLFMAFSVVVTLWSDVAVFEPNEWTALVNRSMVVLCLCYVLVTSIAVGACLGLGSVKHFLSSYAFLLFCAYSVTALLFLGTCFLVLGCLMQRRICRVLVTDSCTARLTARVVRLNVAMLACFVCFTMRALMLAALVRAQAEGEETGNFAKGWKRWERDMRLEWALHLVPCVAMLYLMRKAGEPTSSSSSSTRALASAAEREEAGYDARNVTGDEKRGLAG 357
            MREE+ LL GL+AVC                    XXXXXXXX    S+ TNG+    ++++HL          TD DRVASSRV+VPSLLFHVLVFLCL VEVPVYACRWLS+SGI     +  R LY+LHMTS+LLLFMAFSVVVTLW+DVAVFEPNE TAL+NRSMV LC+CYVLVT IAV  CLG+G+VK+FLSS+AFLLFCAYS+  LL LG  FLVLGCL+Q+RICRVLVT SCTARLTAR+VRLNV MLACF CFTMRALMLA L++AQAEGEE+GN+A GWKR E+DMRLEWALH++PCVAMLYLMRKAGEP+SSSSS+    A            +   GDE  G +G
Sbjct:    1 MREEQALLAGLVAVCAXXXXXXXX-------XXXXXXXXXXXXQQQQSF-TNGNLGQEEERRHLQA--------TDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAG-----------KEYGGDESTGFSG 330          
BLAST of mRNA_P-littoralis_Contig6.88.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.200e-54
Identity = 120/285 (42.11%), Postives = 160/285 (56.14%), Query Frame = 0
Query:   75 TDDDRVASSRVLVPS-LLFHVLVFLCLVVEVPVYACRWLSASGIVEHFSEQGRQLYSLHMTSFLLLFMAFSVVVTLWSDVAVFEPNEWTALVNRSMVVLCLCYVLVTSIAVGACL-GLGSVKHFLSSYAFLLFCAYSVTALLFLGTCFLVLGCLMQRRICRVL------------------------------------------VTDSCTARLTARVVRLNVAMLACFVCFTMRALMLAALVRAQAEGEETGNFAKGWKRWERDMRLEWALHLVPCVAMLYLMR 315
            T D  +     L+P   +FHVLVFLCL VEVPVYA  +++  G    F E GR LY+LH+TS+LLL  AF ++V LWS VA FEP+ W  L NR ++VLC+ Y LVT++AVG CL    S + + +S  F+ FCA+S+ ALL L  CFLVLGCLMQ+RIC  L                                                  LT  V+RLN  +L CFVCF+ RAL+L  L+R +  G +      GW RW++++ +EW  ++VPC+A+LYLMR
Sbjct:   64 TQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSF-EVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADA---LGGWTRWQQEVYVEWIPNVVPCLALLYLMR 344          
BLAST of mRNA_P-littoralis_Contig6.88.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 121 bits (303), Expect = 1.250e-27
Identity = 86/250 (34.40%), Postives = 136/250 (54.40%), Query Frame = 0
Query:   85 VLVPSLLFHVLVFLCLVVEVPVYACRWLSASGIVEHFSEQGRQ-LYSLHMTSFLLLFMAFSVVVTLWSDVAVFEP-NEWTALVNRSMVVLCLCYVLVTSIAVGACLGLGSVKHFLSSYAFLLFCAYSVTALLFLGTCFLVLGCLMQRRICRVLVT-DSCTARLTARVVRLNVAMLACFVCFTMRALMLAALVRAQAEGEETGN-------FAKGWKRWERDMRLEWALHLVPCVAMLYLMRKAGEPTSSS 324
            V+   LLFH L+ L L++++P+Y C  ++ S   E  SE+  + LY +++ S+ LLF AF +V+ LW+ + +F   + W  ++ RS+V +C+ Y L +  A   C+   S+  +L S  ++LF    +  L FL   FL++GC++Q RICR L   +    R  A V RLN  +  C + F MRA +L A + A A   +T +        A   + W   +  EW  HL PC+A++YL+R A  P  SS
Sbjct:   64 VVQQKLLFHQLILLSLMLQIPLYVCYAIAGSQGEEDSSERYFEYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWL--VLAEWVPHLAPCIALMYLLRNASGPEVSS 311          
BLAST of mRNA_P-littoralis_Contig6.88.1 vs. uniprot
Match: A0A6H5KRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT8_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.180e-7
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 0
Query:  296 MRLEWALHLVPCVAMLYLMRKAGEPTSSSSS 326
            M LEWALH++PCVAMLYLMRKAGEP+SSSSS
Sbjct:    1 MMLEWALHVIPCVAMLYLMRKAGEPSSSSSS 31          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LN17_ECTSI3.280e-13365.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B0_9STRA4.200e-5442.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XM64_HETAK1.250e-2734.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KRT8_9PHAE1.180e-787.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:347494..354030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.88.1mRNA_P-littoralis_Contig6.88.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 346348..354150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.88.1 ID=prot_P-littoralis_Contig6.88.1|Name=mRNA_P-littoralis_Contig6.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=388bp
MREERTLLVGLLAVCIVSSAALVRLIAVVRIFRRQRREQQRRSTSNSSYN
TNGDPLSHQQQQHLHQDEDAMPTPTDDDRVASSRVLVPSLLFHVLVFLCL
VVEVPVYACRWLSASGIVEHFSEQGRQLYSLHMTSFLLLFMAFSVVVTLW
SDVAVFEPNEWTALVNRSMVVLCLCYVLVTSIAVGACLGLGSVKHFLSSY
AFLLFCAYSVTALLFLGTCFLVLGCLMQRRICRVLVTDSCTARLTARVVR
LNVAMLACFVCFTMRALMLAALVRAQAEGEETGNFAKGWKRWERDMRLEW
ALHLVPCVAMLYLMRKAGEPTSSSSSSTRALASAAEREEAGYDARNVTGD
EKRGLAGGGGGAGGSGSGEGTDTAAVVGRDYGSGGGR*
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