mRNA_P-littoralis_Contig6.63.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig6.63.3
Unique NamemRNA_P-littoralis_Contig6.63.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 9.400e-52
Identity = 234/378 (61.90%), Postives = 262/378 (69.31%), Query Frame = 3 
Query:   18 DDPCLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCAKKIL-AAGENDADASG--------GKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------QLRLAALAVLDESSSEGA--GNEASNGIGXXXXXXXXXXXXXXXXXXXXIAKXXXXXXXXXXXXXXXXXXXXXDICLVCGQDGDAGKILRCCDCSGSGGGMGVYHSHCLKEQPPVDKPEGEWMCPRCVTKKRKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIASRGGEESLA----------KRMKREWSESQEALLATAVKKFGSGKWKQMAGDPDFDFEGKPPEALKFKWRAISKR 1064
            DDPCLVCGGLDNP  ALLCDGCDGCYH++CL+PPLKRAPKGDWLCP C +K+L A+G++D  AS         GK ++   XXXXXXXXXXXXXXXXXXXXXXXXX        ++RLAAL              N A+  +G  XXXXXXXXXXXXXXXXXX   XXXXXXXXX            DICLVC +  D  +ILRC  CSG G GMG+YH+ CL +       EGEW+CPRCVTKKRK GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       K+ +R WS S EALLATAVKK G+GKWK+M  DP+FDFEG P  ALK KWR +S++
Sbjct: 1152 DDPCLVCGGLDNPDKALLCDGCDGCYHVYCLSPPLKRAPKGDWLCPKCVEKVLDASGDDDVPASASTTGPARKGKGSSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQEMRLAALXXXXXXXXXXXXLANNANGVVGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEEEEE-----DICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPAEGEWVCPRCVTKKRKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPRRAWSASMEALLATAVKKVGAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQK 1524
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: D8LN06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN06_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.600e-29
Identity = 145/255 (56.86%), Postives = 163/255 (63.92%), Query Frame = 3 
Query:  312 LRLAALAVLDESSSEGAGNEASNGIGXXXXXXXXXXXXXXXXXXXXIAKXXXXXXXXXXXXXXXXXXXXXDICLVCGQDGDAGKILRCCDCSGSGGGMGVYHSHCLKEQPPVDKPEGEWMCPRCVTKKRKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIASRGGEESLAKRM-KREWSESQEALLATAVKKFGSGKWKQMAGDPDFDFEGKPPEALKFKWRAISKRFSS 1073
            +RLAALAVL+ESS +   NE                           A XXXXXXXXXXXXXX       DICLVC +  D  +ILRC +CSG G GMG+YH+ CL +       EGEW+CPRCVTKKRK G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 +R WS S EALLATAVKK G+GKWK+M  DP+FDFEG P  AL+ KWR +S++  S
Sbjct:    1 MRLAALAVLEESSED---NEEPANNANGVVDANESGEETESDGPEATAXXXXXXXXXXXXXXXTEEEEEEDICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEWVCPRCVTKKRKHGGPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRAWSSSMEALLATAVKKMGAGKWKEMEEDPEFDFEGMPANALRQKWRTLSQKRRS 252
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A0A7S1JGF3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JGF3_9EUGL)

HSP 1 Score: 85.1 bits (209), Expect = 9.830e-16
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 3 
Query:    9 SDDDDPCLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCAKK 170
            S +++PC++CGG +  + ++LCDGCDG YH+FCL PPLK  P GDW CP C  K
Sbjct:   27 SQENEPCVICGGKEEAERSVLCDGCDGAYHIFCLRPPLKTIPDGDWFCPQCQAK 80
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: D8M555_BLAHO (PHD-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M555_BLAHO)

HSP 1 Score: 80.1 bits (196), Expect = 5.320e-13
Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 3 
Query:   27 CLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCAKKILAAGE 188
            C VCG  D  +S LLCDGCD  +H+FCLNPPLK+ P GDW CP C +K +  G+
Sbjct:   65 CEVCGRSDKEESLLLCDGCDKGFHLFCLNPPLKQIPSGDWYCPGCLEKRVTRGD 118
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A0A7S1CM23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM23_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.240e-12
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 3 
Query:   18 DDPCLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCAKKI 173
            D  C VCGGL  P   LLCD CDG YH+FCL PPLK  P GDW CP+C + +
Sbjct:  416 DPGCRVCGGLHKPSKVLLCDHCDGEYHLFCLKPPLKAVPAGDWACPDCTELL 467
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A0A835SC30_9CHLO (PHD-type domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SC30_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 6.740e-12
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 3 
Query:   15 DDDPCLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNC 161
            DD  C VCGG D+P + LLCD CDG YHM CL+PPLK  P GDW CPNC
Sbjct: 1619 DDTLCAVCGGGDDPDTILLCDTCDGGYHMGCLDPPLKDIPDGDWHCPNC 1667
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A0A7S0D7R1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D7R1_MICPS)

HSP 1 Score: 71.2 bits (173), Expect = 2.650e-10
Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 3 
Query:   15 DDDPCLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCA 164
            D + C VCG  D  + ALLCDGCDG +HM CL PP KR P GDW C  CA
Sbjct:  163 DAEKCKVCGVADE-RDALLCDGCDGAFHMGCLKPPRKRVPAGDWFCKPCA 211
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: L8GE44_ACACA (PHDfinger domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GE44_ACACA)

HSP 1 Score: 75.1 bits (183), Expect = 3.550e-10
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 3 
Query:   27 CLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCAKK 170
            C+VC G  + +  LLCD CD  YH FCL+PPLK+ P GDW CP+CA+K
Sbjct:   88 CVVCKGPHDEEQLLLCDDCDDGYHTFCLDPPLKKIPSGDWFCPSCAEK 135
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A5E3W2_LODEL (Uncharacterized protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5E3W2_LODEL)

HSP 1 Score: 74.7 bits (182), Expect = 3.800e-10
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 3 
Query:   15 DDDPCLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNC 161
            D D CL+CG  DNP+  LLCD CDG +HM CLNPPL + P  +W C  C
Sbjct:  188 DSDYCLICGDNDNPEETLLCDHCDGAFHMACLNPPLTQVPATNWYCDKC 236
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BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Match: A0A7S1CP91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP91_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.270e-10
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 3 
Query:   27 CLVCGGLDNPKSALLCDGCDGCYHMFCLNPPLKRAPKGDWLCPNCAKKILAAGENDADASGGKAA 221
            C +C G  + +S LLCDGCDG +HM CL+PPL + PK DW C  C +   A G   A   GG A+
Sbjct:   49 CRICRGKHSLESILLCDGCDGEFHMECLDPPLDKVPKTDWYCRACRR---ATGAEAAALGGGSAS 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.63.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWU5_9PHAE9.400e-5261.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN06_ECTSI1.600e-2956.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1JGF3_9EUGL9.830e-1655.56Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
D8M555_BLAHO5.320e-1357.41PHD-type domain-containing protein n=1 Tax=Blastoc... [more]
A0A7S1CM23_9STRA3.240e-1259.62Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835SC30_9CHLO6.740e-1267.35PHD-type domain-containing protein n=1 Tax=Chlamyd... [more]
A0A7S0D7R1_MICPS2.650e-1060.00Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
L8GE44_ACACA3.550e-1058.33PHDfinger domain containing protein n=1 Tax=Acanth... [more]
A5E3W2_LODEL3.800e-1057.14Uncharacterized protein n=1 Tax=Lodderomyces elong... [more]
A0A7S1CP91_9STRA5.270e-1047.69Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:268566..273713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog159749.K0TFH1
PFAMsBromodomain,DDT,MBD,PHD,WHIM1,WSD
Model size2034
Max annot lvl2759|Eukaryota
KEGG koko:K10728,ko:K18086
KEGG Pathwayko00562,ko01100,ko03440,ko04070,ko04140,map00562,map01100,map03440,map04070,map04140
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006996,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0019219,GO:0019222,GO:0031010,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0043044,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070603,GO:0071840,GO:0080090,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1904949,GO:2000112,GO:2001141
Exons5
Evalue1.77e-05
EggNOG OGsCOG0553@1|root,KOG0383@2759|Eukaryota
Ec32 ortholog descriptionPHD-type zinc finger and SANT/Myb domain protein
Ec32 orthologEc-27_000910.1
EC3.1.3.64,3.1.3.95
Descriptionperipheral T cell tolerance induction
Cds size978
COG categoryKL
BRITEko00000,ko00001,ko01000,ko01009,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.63.3prot_P-littoralis_Contig6.63.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig6 269524..273615 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791233.683824-UTR-P-littoralis_Contig6:268565..2695231680791233.683824-UTR-P-littoralis_Contig6:268565..269523Pylaiella littoralis U1_48UTRP-littoralis_Contig6 268566..269523 -
1680791233.7661986-UTR-P-littoralis_Contig6:273615..2737131680791233.7661986-UTR-P-littoralis_Contig6:273615..273713Pylaiella littoralis U1_48UTRP-littoralis_Contig6 273616..273713 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791233.7027395-CDS-P-littoralis_Contig6:269523..2699341680791233.7027395-CDS-P-littoralis_Contig6:269523..269934Pylaiella littoralis U1_48CDSP-littoralis_Contig6 269524..269934 -
1680791233.7135355-CDS-P-littoralis_Contig6:270453..2706571680791233.7135355-CDS-P-littoralis_Contig6:270453..270657Pylaiella littoralis U1_48CDSP-littoralis_Contig6 270454..270657 -
1680791233.7269237-CDS-P-littoralis_Contig6:271215..2713081680791233.7269237-CDS-P-littoralis_Contig6:271215..271308Pylaiella littoralis U1_48CDSP-littoralis_Contig6 271216..271308 -
1680791233.7383726-CDS-P-littoralis_Contig6:272584..2728091680791233.7383726-CDS-P-littoralis_Contig6:272584..272809Pylaiella littoralis U1_48CDSP-littoralis_Contig6 272585..272809 -
1680791233.7546964-CDS-P-littoralis_Contig6:273570..2736151680791233.7546964-CDS-P-littoralis_Contig6:273570..273615Pylaiella littoralis U1_48CDSP-littoralis_Contig6 273571..273615 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig6.63.3

>prot_P-littoralis_Contig6.63.3 ID=prot_P-littoralis_Contig6.63.3|Name=mRNA_P-littoralis_Contig6.63.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=326bp
MFCLNPPLKRAPKGDWLCPNCAKKILAAGENDADASGGKAAAAEGKGAAA
KAKAAREAKEEEAREEEAKQQLRLAALAVLDESSSEGAGNEASNGIGGGE
GSGEETESDAEQARREAIAKVEQEEEVDDDDDDDDDDDDDEDICLVCGQD
GDAGKILRCCDCSGSGGGMGVYHSHCLKEQPPVDKPEGEWMCPRCVTKKR
KSGGGGGGGSGKSPAGKKKAKSGTGGKDSKSTAVAASKKRKGAATAEGGG
GSGSGIASRGGEESLAKRMKREWSESQEALLATAVKKFGSGKWKQMAGDP
DFDFEGKPPEALKFKWRAISKRFSS*
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mRNA from alignment at P-littoralis_Contig6:268566..273713-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig6.63.3 ID=mRNA_P-littoralis_Contig6.63.3|Name=mRNA_P-littoralis_Contig6.63.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5148bp|location=Sequence derived from alignment at P-littoralis_Contig6:268566..273713- (Pylaiella littoralis U1_48)
AGTCGTCGTCGGATGACGACGACCCGTGCCTGGTGTGCGGGGGCCTGGAC
AACCCCAAGAGCGCGCTGCTCTGCGACGGCTGCGACGGCTGCTACCACAT
GTTCTGCCTCAACCCCCCTCTCAAGCGTGCGCCCAAGGGAGACGTGAGTT
GCTTGTTGTGTTTTCGTTTTTTGTTGACGCTGGCCGCGGAGGGTTGGGGC
GGGGGGGAGGCGGGGATGAGGCGGGGGGGGGGGGGGGGGGGGGGGGGCAC
CGGTATGACAAGACGACGGTAATATGATGCATTCTCATATGCTTCGAGTA
TATACTTTGGTACAGCAGTAGGATCTACATGGAGCGTCCTCGACAGGTCT
CGCGAAAGCTGGAAATCGACCGTCGACCATGGACGGTAAAATGGTGTCAT
GCGTGGATGTATGTACACAACTCTCGAGGCTACCCGCAATTCATCTGGCT
CCCCTCGTACGATTTCGCACCGGGGCAGGGGGGCCATCGCACGATACCGG
GAGTCATATGACATCACCCCTCAATCTCGTACTTGTACGGTACGTTCAAG
ATTTTCTGTTTTCTGGGGGCGGGAGGGGGGGGCTTGTGGTCCCGCTGCCT
CGCCCTCCGCCCCCCCCTTCCTCCGCCCCAGCATTCGTCGTCGCCATGCC
CTCTGTCTTTTCAAGCCTTTAACGGTACATTTGCACCTTTTCTTCCTCTC
TGTTGACGACCGTTTTCTTCGTTTTTCCCGCGCCCCCCCCCCTCTCGCCG
CTGCCGCTGCCGCTGCCGTTACCGTCGCTGCCCCCGCCCCCGCCCCCCCC
CCCCCCGCCCCCCCCCCCCCCCCCGCCCCCCCCCCCGCCCCCGCCCCCGC
CCCCCTCAACAAAAAAAAACGCATGCACTATGGTATAAAAAAAAACGGAA
AAAGTGGTTGTGCCCCAACTGCGCGAAAAAGATCCTCGCCGCCGGGGAGA
ATGATGCCGACGCTAGCGGGGGTAAGGCGGCGGCGGCGGAAGGGAAAGGC
GCAGCGGCGAAGGCGAAGGCGGCGAGGGAAGCGAAGGAGGAGGAGGCAAG
GGAGGAGGAAGCGAAGCAACAGCTGCGACTTGCTGCGCTGGCGGTGTTGG
ACGAGTCGTCGTCCGAGGGTGCCGGAAACGTGAGAAAGACTACCGCACAC
TCACAACTTGTTTGTTGTGCGGTGTTTGGGTGTGTCGGGGATGCAGGAGT
ATTCAAGCGGGGGACGAGCGGGCGAGTGTCGCAGAGCGCAGCAGCGGTAT
GGTTACGCTTAGGGCTGCGTTGCGTCGAGCGATGGCAGCGTTGGATTCGG
AGATCGTCGCCGCTTTTTGTCGTAGAAGCGCGAGCCAAGTGTACCTTAAA
CCGCTAAGGACGGCAGGATACAGAGAAGCTTCTTCATAATCTTCAAATGA
ACAATTTTACTCTGCCTTTTCCTTCTTCTTCCTTCTTCACTTCTTCTCGA
GGCTGCGAACATATGATATGTGTTGGTACTCTTTGTTCTGGTTTATTTAT
TTCTCATTTCTTTTTCTTTTTCGAGTCTCCGTTTCTGTATTTTTGTTTTG
TGTTTATAGCCACAACGGGAAGCGGAAAAGTACCGGCACTCCCCCACCTT
GGTCGGTATCCGTGTTTTGTGCACGTCTTTTCTTTTTATCTTGCCTGGTA
CAGTCAGCAGCTCGGTTCAGTTTTCCTCCTTGTACCTTGTACGACATTGT
GCCTGGTTTGTGACCGCAGGCTAAATTCTTGCGATGAACTCATGTGAGAA
CCAACGACAACAACAACAGCAACAGCAACACACGACGCGGATACTTGACC
TCCGTCTCGGCCCCTTCGCCCCCGCCTCATTCCCAGCCCCCAGCCCCCCC
CCCCTGTCTCTATTTCACTTCTTAGTATGTATTTTTGTGTCTCCGCCTCC
CCTCTCTCTGATGACTTGTATTTTGGCTGACAGTTATCATGTCTCTCTTT
CTCTCGCAACCCCCCTCTCTTATTCTCGATCGCTCTTTTAACGCGTTGTC
AATGGTTTTCCTGCTCTTCCCCTCTCTCTATACCTGTGCCTTCTCGTTGC
CTCTATGCGTCCCCTCTTTTCCCGATGCCGTTCCCAACCACCCCCTCACC
CCGCCGCTCTCCGTCGAAGAAGAAACTCAAAACGACACAACGACAGACAC
CTCCGGGGTGAACCATGCTGCAACGCTACTGACCCAACCTGTTCCTGACC
TGGCCTGATCTGATCTAATCTGATCTGATCTGAATTGATCTGATATTATA
TGATATGATATGACGTAACATGATACGATATGACATGACATGATATGGTA
TGAGCTGATATTATACTTCGAAGTATGATACTATCTGTTGTGATATGATC
CGATATGATCTGATATGATCCGATATGATCTGATATGATATGACCAACGC
GACAGGAGGCGTCCAACGGCATCGGCGGCGGCGAAGGCTCGGGAGAGGAG
ACGGAGTCCGACGCGGAGCAAGCCCGACGAGAAGCTATTGCCAAAGTGGT
GAGTCGGTCGGAGGCGAAGAAGGCTAGGCTTTAGGCTGTAAAACAATGCA
GCAGGTTTGAGGCTTTGTCGTGCCACAACAAAAGCAGCAAGATGGGCGTA
CTGCAAACGACGTCATTTTTATCGGATTCGTGTTGAGTGGGGAACACCAA
ACCTATTTTTTCTTGGATGGTTGGCGGATTTCATACATTCATCGTCCTCC
ACTCTTTCGGATGGCTTTCTGGTGGAGAAGTTCTCACTTCGTCGTTCGTT
TGTGTTGTAAGGTACCGGCCGGGCGTAGTCAGTAAATACTGTACGTGGTA
CGTGAGACAATAGCAGTCGTCCGTCTTTTTCTTTTTTTTTTTGGCGTGGT
CATTGCATGTTCTGATTTGCCATTTGCCTTCGTATAAGTGTACAGCCAGT
GACCGCGCACGGGAAAAAAAAGTCGTGTCTATGTTACCTATATAGGGGAG
GCAAGCCTGCTCGGACGCGAAACTCGAAGCACGTGTTCTTGTTGCTACTC
TTTGTAACCATAAGGAGTCGATTGTTTCTGTGTGTCCGTGCGTCCGCCGG
AAAAAGGAGCAAGAAGAGGAGGTCGACGATGACGACGATGACGATGACGA
CGATGACGACGACGAGGATATCTGCCTTGTCTGCGGGCAGGATGGAGACG
CTGGCAAGATCCTGCGATGCTGTGACTGCTCCGGGAGCGGAGGCGGCATG
GGAGTGTACCACAGCCACTGCCTCAAGGAGCAGCCACCTGTAGATAAGCC
TGAGGGCGAGGTGAGCGCCCGCTTCGCACGGACCTCCGACATGCCGCTGC
CTGGATTTTCCGGTTTTGTTTTCGTTCCACTGGCGCCCTTTCTTTGCCGT
CTATATATACTTCGTATATACTCCGTATATATATTTTTTTTCTGCTTGTC
ATCATGCAATGGCATCGGGCGTGTTTTATTCCGTCATGTGCTTATCGAGA
AGAGGGCTCAAGGGCTTTGGCGAAGGCACCCGTTCCCTCTCACGAAGCAG
GGTTTTGTCGAAATCTTTGCTGCGCGGCTGAAATGTTGTACGGAGTAATT
TCCAATATCCAATTCCCAAAGTCCACCCCTGTTTCCACACGAAACAGTTG
TTTTTTGTCGAAGCCATTACTGGGTGCGGCTGAGGTCGTTTCGAATTTTC
CAATGTCCAAAGCTTTCACGTATGATTCCTGCCCACAACCAATCTCTTTC
CTGCCCTCCTTGCCCCCGCCGCCCCGCCTTATTTTTCATTTATCACGGTA
CCAATCAACCGACGCCCCCCTCCATCCAGTGGATGTGCCCGCGCTGCGTT
ACCAAGAAGCGCAAATCCGGCGGTGGCGGTGGCGGCGGCAGCGGTAAATC
GCCGGCGGGAAAAAAGAAGGCAAAAAGCGGGACCGGGGGCAAAGATAGCA
AGAGCACCGCTGTTGCCGCGTCCAAGAAACGGAAGGGAGCTGCCACAGCG
GAGGGGGGCGGCGGCAGCGGCAGCGGTATCGCTTCGCGTGGGGGGGAGGA
ATCCTTGGCGAAGCGGATGAAGCGGGAGTGGTCGGAGAGCCAGGAAGCCT
TGCTCGCGACCGCGGTCAAGAAGTTCGGCTCGGGGAAGTGGAAGCAGATG
GCGGGGGATCCCGACTTCGACTTCGAGGGGAAGCCGCCCGAGGCTCTCAA
GTTCAAATGGAGAGCCATTTCAAAGAGGTTTTCCAGCTGAGACTGAAAGA
ACAAAATAGAAAACGGTCGTCTCGTCGGAGGTGGCGAAAACGGCGGCGGT
GGCGGAGGTGGCCTAGTTTTTTTTCTCTGTTTTTTACTCTTCCTTCAGTT
TGGTTGATGGATCAGATCCGCGATAGGTGGCGGCGGGCGGTCGGGCAGGG
CGTGTTGCCGATGCCGCAGTGTACACGAATGGTGTTCGTCACGTGTAGAA
AACCGCGAGACGCTTCGACTGGGCAGCGCCGCAACACTAGGTACAGTGGT
GGTGTGTGTATGTGCGCGTTAGCACGTGTTTGACTGAAGGGGAGAGCCGA
TGTCACGTTGTTACCCCCGTTCATCCCCCCTGGTAGGCATGCGTGTGGCG
AGGGTTACGTCTCGAACCGTTTCGCGCGTAGTTGGTGGCGATCTGTGGAT
ATTATCACACAAGGTTGAATGGGAACCCATGAGGGATCGGGTCGGGTCTT
ATGTACTTTGTACTGTACAGCACCAACAGGCGGCCATCGCTTTCAGTGCG
GAAGAGTTTGGTATTGACGGGAGGGACCCTGCGCACACGCGAACGAAAGA
CATTTCGTACATACGTGTTTTTGGTGTCAAGAGGGTATTATTTAACTTCC
TTCGGTATGCGATCTATGCCTTCAAAAATGTTCGGAAATGTTGACACTGA
CAAACCAAACCGTCTTTTTTGTGTCCTTCGCTCGGCGTGCGTACACGAAA
AAATGTCAGCGTCGTGCAGCGCACGATTTCGTACACGGGAACATGACGGA
TTTTGATGCTTTGTTTGGTGGGGGGGAGTTGTTGAAATCTCTCTCTCGCC
CACCGTTCTACCAGCGCAAACTCCTCTGTGACTTTGTCGTTCCTGCGAAC
CATTGGCACGCACCCACAGGCCCCACAATAATTACGACCGCTACGTTGTA
CCAATACTGCCACTGAAGTACACCAGCTTGTTGAGTATTCTTGTCCGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig6:268566..273713-

>mRNA_P-littoralis_Contig6.63.3 ID=mRNA_P-littoralis_Contig6.63.3|Name=mRNA_P-littoralis_Contig6.63.3|organism=Pylaiella littoralis U1_48|type=CDS|length=978bp|location=Sequence derived from alignment at P-littoralis_Contig6:268566..273713- (Pylaiella littoralis U1_48)
ATGTTCTGCCTCAACCCCCCTCTCAAGCGTGCGCCCAAGGGAGACTGGTT
GTGCCCCAACTGCGCGAAAAAGATCCTCGCCGCCGGGGAGAATGATGCCG
ACGCTAGCGGGGGTAAGGCGGCGGCGGCGGAAGGGAAAGGCGCAGCGGCG
AAGGCGAAGGCGGCGAGGGAAGCGAAGGAGGAGGAGGCAAGGGAGGAGGA
AGCGAAGCAACAGCTGCGACTTGCTGCGCTGGCGGTGTTGGACGAGTCGT
CGTCCGAGGGTGCCGGAAACGAGGCGTCCAACGGCATCGGCGGCGGCGAA
GGCTCGGGAGAGGAGACGGAGTCCGACGCGGAGCAAGCCCGACGAGAAGC
TATTGCCAAAGTGGAGCAAGAAGAGGAGGTCGACGATGACGACGATGACG
ATGACGACGATGACGACGACGAGGATATCTGCCTTGTCTGCGGGCAGGAT
GGAGACGCTGGCAAGATCCTGCGATGCTGTGACTGCTCCGGGAGCGGAGG
CGGCATGGGAGTGTACCACAGCCACTGCCTCAAGGAGCAGCCACCTGTAG
ATAAGCCTGAGGGCGAGTGGATGTGCCCGCGCTGCGTTACCAAGAAGCGC
AAATCCGGCGGTGGCGGTGGCGGCGGCAGCGGTAAATCGCCGGCGGGAAA
AAAGAAGGCAAAAAGCGGGACCGGGGGCAAAGATAGCAAGAGCACCGCTG
TTGCCGCGTCCAAGAAACGGAAGGGAGCTGCCACAGCGGAGGGGGGCGGC
GGCAGCGGCAGCGGTATCGCTTCGCGTGGGGGGGAGGAATCCTTGGCGAA
GCGGATGAAGCGGGAGTGGTCGGAGAGCCAGGAAGCCTTGCTCGCGACCG
CGGTCAAGAAGTTCGGCTCGGGGAAGTGGAAGCAGATGGCGGGGGATCCC
GACTTCGACTTCGAGGGGAAGCCGCCCGAGGCTCTCAAGTTCAAATGGAG
AGCCATTTCAAAGAGGTTTTCCAGCTGA
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