prot_P-littoralis_Contig6.36.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig6.36.1
Unique Name	prot_P-littoralis_Contig6.36.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	870

Homology

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BLAST of mRNA_P-littoralis_Contig6.36.1 vs. uniprot
Match: D7FU29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU29_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 9.230e-52
Identity = 121/190 (63.68%), Postives = 141/190 (74.21%), Query Frame = 0

Query:    1 MSGQIVPKRFGLKYSPKPAIALEYQKPDSGMAVLEVVIEQLTPRTCDVNGVVDALQKNHPSHLGPNMVSANQLERLVSRLLFEGRAYLPEEYP-TPTGMTFDETQQQHHQNSSSPPHPGHMSPTKPSLQPKPAEGYDSDHSDGLSRGPTPAPTPEVQRATRDIS-DASSEEANTLVSLGGDPFDDLGGEE 188
            MSGQIVPKRFGLKYSPKPAIALEYQKPD+G+A++EV IEQL+P+T DV+GVVDALQK HP HLGP+MVS NQLERLV RLL EGRA+LP EYP TP  M  +E+Q  H  +S++P   GH  P +P L PK +E YDSD+S  LS GPTPAPTPEV R TRD S D     +   +S  GD F  +  EE
Sbjct:    1 MSGQIVPKRFGLKYSPKPAIALEYQKPDAGIAIVEVQIEQLSPKTFDVSGVVDALQKKHPCHLGPDMVSVNQLERLVWRLLSEGRAHLPGEYPITPEQMVVNESQ--HQPSSTTPQKHGH--PMQPLLLPK-SEDYDSDNSGRLSTGPTPAPTPEVPRVTRDRSEDDGIITSFAPLSAQGDGFHGIRSEE 185

[Close]

BLAST of mRNA_P-littoralis_Contig6.36.1 vs. uniprot
Match: A0A6H5KR77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR77_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 3.950e-23
Identity = 135/320 (42.19%), Postives = 157/320 (49.06%), Query Frame = 0

Query:  568 SPLSSPPLSSRGGSNLSSLAGLPLPPMGGGRPRLGLLGSLPPVGGRGLPSLALIAGEKAYNA-GEEGEVATRTVDTCDGDASDDAVTKVTDTSVSAELSTPLS--SGGLLLGTSAARSPTVEKEPASITPGPLRLSPTPTTRDGSSKETNEDNINSDTGEDSGREDPAPLLPTRNVGGQEKKEEESAFRARLGLGEDEESDNEEETHGGGEIGEEFVGAKRNSNTSSPPGSPKQHQGQEEENAGRTPSVDPNRKEEVGS--------PVGG---GGYFGGSDE-ANELE---EVSSVDEDISFEQESVNSGEGGSDDYFS 869
            SPLSSP  S RG ++LSSLAGLP PPMGG R RLGLLG+LPPVGGRGLPSL L  G KA +A G+E +   R  D   GD        +    +S+  STP S  S G  +  SAA + +  KE      G +     PT       + + D  N    + SGR   A  +  +               A LGLG                             T SPPGSPKQHQGQEEE+AGR        K   G+        PVGG   GGYFGGSDE  +E E   EVSSV EDISFEQES  SG  G DD+FS
Sbjct:  528 SPLSSPLASPRGLASLSSLAGLPPPPMGGARQRLGLLGALPPVGGRGLPSLVLPGGLKASSAPGQERKDVERKADE-GGDGESATGGTMEAGCLSSRTSTPPSPSSSGKKISVSAAATSSATKE------GSVSSVGAPTHAPAGEGDDDRDGEN----DGSGRFSTAGAVKKQXXXXXXXX---XXXXALLGLG------------XXXXXXXXXXXXXXXXXTLSPPGSPKQHQGQEEEDAGRALLEGLGGKRGGGTATNVTLAAPVGGLDVGGYFGGSDEEVSEAEIDGEVSSVGEDISFEQESAESG--GDDDFFS 819

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig6.36.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig6.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FU29_ECTSI	9.230e-52	63.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KR77_9PHAE	3.950e-23	42.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 783..809
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 652..677
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..605
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 709..728
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 741..760
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 637..651
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 533..584
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 630..869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..401

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig6	contig	P-littoralis_Contig6:148751..153501 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig6.36.1	mRNA_P-littoralis_Contig6.36.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig6 148751..153501 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig6.36.1 ID=prot_P-littoralis_Contig6.36.1|Name=mRNA_P-littoralis_Contig6.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=870bp
MSGQIVPKRFGLKYSPKPAIALEYQKPDSGMAVLEVVIEQLTPRTCDVNG
VVDALQKNHPSHLGPNMVSANQLERLVSRLLFEGRAYLPEEYPTPTGMTF
DETQQQHHQNSSSPPHPGHMSPTKPSLQPKPAEGYDSDHSDGLSRGPTPA
PTPEVQRATRDISDASSEEANTLVSLGGDPFDDLGGEEKTNSSATVARQV
SSNGGKGQQQSSAATAASSSAAASSLLPDENILGAEKEEGKEEAVVGKDE
SLSGEEDNNERRGGERKENEIDQAHGGIRHETKEEEIRGKTEVSSSSTGS
FSGLHLQRDKLLEPDDALRKGDGFDGDDGDTSDENKDYDSSRSEKGKVER
LSPLSTSAIVVATTTTSTTLEEDPGRKSPPREPRHGENSSDKDRLGGEEG
GKEEEEMSEIEEEDDGVPDDSKSDDFEEGRSRSSSSQAACENGEEHPDDD
GGKALRSQEDDIHRSTAGILADTTFASGEDDAIAARRIRATSKDGDLEQN
SLPSSRATEREAGGRGSDTPAGASPPPAPRTATSPTAVTSTITSPTSGKR
DATLSLSSNLAPSSVLTSPLSSPPLSSRGGSNLSSLAGLPLPPMGGGRPR
LGLLGSLPPVGGRGLPSLALIAGEKAYNAGEEGEVATRTVDTCDGDASDD
AVTKVTDTSVSAELSTPLSSGGLLLGTSAARSPTVEKEPASITPGPLRLS
PTPTTRDGSSKETNEDNINSDTGEDSGREDPAPLLPTRNVGGQEKKEEES
AFRARLGLGEDEESDNEEETHGGGEIGEEFVGAKRNSNTSSPPGSPKQHQ
GQEEENAGRTPSVDPNRKEEVGSPVGGGGYFGGSDEANELEEVSSVDEDI
SFEQESVNSGEGGSDDYFS*