prot_P-littoralis_Contig6.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.9.1
Unique Nameprot_P-littoralis_Contig6.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length103
Homology
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BLAST of mRNA_P-littoralis_Contig6.9.1 vs. uniprot
Match: A0A6H5JND8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND8_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.770e-42
Identity = 77/101 (76.24%), Postives = 85/101 (84.16%), Query Frame = 0 
Query:    2 KSSPGSFEVELSAQANERGHFKVTPDKGTVSPGATAELSCVFEPPPXXPRLPGPAGGKGGTLEVGHWYTTTALVHLRGGYRPPGSSEVLTVSIQLEGFITA 102
            KSS GSFE+ELSA A E+G FKVTP+KG + PG+TA++SC FEPPPXX  LPGPAGGKGGT E   WY TTA VHLRGGYRPPGSSEV TVS+QLEGFITA
Sbjct:  194 KSSAGSFEMELSADAREKG-FKVTPEKGNIPPGSTADISCAFEPPPXXXSLPGPAGGKGGTPE---WYKTTAFVHLRGGYRPPGSSEVHTVSVQLEGFITA 290
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JND8_9PHAE1.770e-4276.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:44937..46414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.9.1mRNA_P-littoralis_Contig6.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 44937..46414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.9.1 ID=prot_P-littoralis_Contig6.9.1|Name=mRNA_P-littoralis_Contig6.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
KKSSPGSFEVELSAQANERGHFKVTPDKGTVSPGATAELSCVFEPPPPPP
RLPGPAGGKGGTLEVGHWYTTTALVHLRGGYRPPGSSEVLTVSIQLEGFI
TA*
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