prot_P-littoralis_Contig6.2.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.2.3
Unique Nameprot_P-littoralis_Contig6.2.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length468
Homology
BLAST of mRNA_P-littoralis_Contig6.2.3 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 4.480e-155
Identity = 285/466 (61.16%), Postives = 323/466 (69.31%), Query Frame = 0
Query:   26 MDDVLSAALSADNTVRRTAEATLTYASTQRGWPVALAKRLSQNYTSTYHHDSYD--------RGARAAERDDPTGGQRLMAGMLLQHYVRDRWEVACPTTLPRGDKEQVRAMVVATMVDPQAPRSARASASRVVALMA-AGGEWPARWSGLIPSLLGQLAVAVAAVAHVRGEAGGF----GXXXXXXXXXXXXXXXXXXXENAVARAESCAKCLQYLTEEVPMEHAPRLFQQAFPGLVQASEVEYLPRSIRARVFRIVRELFSSIGTLVSVRGESRLLPGLKQYVPPWLNLVSKTLQSAVDGRA-GHPEGRTGARPEEAGVDVGVDIGDRGVGGGDSRGGDFNVELEGLRTAMVLVAHVPSVVGDGHLGQVLPPLWEILTSGLERHERSMLLVDGDSVDAPDDGA---------YASDGERQGFEELIVHSLELLAAIAACDERQVSGLLGGEGAGVGSLLSVVIR 468
            MD VL +ALSADNTVRR AEA L+YA TQRG+ +ALAK+L+ NY   Y   +YD              ERD      RLMAGMLLQH+VRD+WE+A    LP  DK QVR + + TM+D  APR+ARASASRVVALMA AGGEWP+ W GLIPSL+GQLA+A AAV + R EAG      G                   E+AVARAESCAKCLQYLTEEVPMEH P +FQQAFPGLV+A + +YLPRSIR RVFRIVRELF+SIGTLVSVRGE+RLLPGL+Q VPPWL+LVSKTLQSAVDGRA G    + G                           DF VELEGLRTAMVL+AHVPS VGDGHLGQ+LPPLW++LT G ERHE+SML  DG+  D  +            YASDGERQG +ELIV SLELLAA AAC + QVSGLLGGEGAGVGSLL+VVIR
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNY---YPRGAYDGDXXXXXXXXXXXXERDGMWMPMRLMAGMLLQHFVRDQWELADDAVLPAEDKIQVRTLALTTMIDVSAPRAARASASRVVALMATAGGEWPSGWGGLIPSLIGQLAIAAAAVENARAEAGSAEAPRGGVGGRGRAGERAEAAAVAAEHAVARAESCAKCLQYLTEEVPMEHVPEVFQQAFPGLVEAGKADYLPRSIRRRVFRIVRELFTSIGTLVSVRGETRLLPGLQQCVPPWLHLVSKTLQSAVDGRAIGGDRDKNGXXXXXXXXXX-----------------DFGVELEGLRTAMVLLAHVPSTVGDGHLGQLLPPLWQLLTDGRERHEQSMLSSDGNGEDGDEXXXXXXXXXXXXYASDGERQGLDELIVQSLELLAASAACPDPQVSGLLGGEGAGVGSLLAVVIR 446          
BLAST of mRNA_P-littoralis_Contig6.2.3 vs. uniprot
Match: A0A6H5L6E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E1_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 9.050e-119
Identity = 241/349 (69.05%), Postives = 264/349 (75.64%), Query Frame = 0
Query:  134 MVDPQAPRSARASASRVVALMA-AGGEWPARWSGLIPSLLGQLAVAVAAVAHVRGEAGGF----GXXXXXXXXXXXXXXXXXXXENAVARAESCAKCLQYLTEEVPMEHAPRLFQQAFPGLVQASEVEYLPRSIRARVFRIVRELFSSIGTLVSVRGESRLLPGLKQYVPPWLNLVSKTLQSAVDGRAGHPEGRTGARPEEAGVDVGVDIGDRGVGGGDSRGGDFNVELEGLRTAMVLVAHVPSVVGDGHLGQVLPPLWEILTSGLERHERSMLLVDGDSVDAPDDGA---------YASDGERQGFEELIVHSLELLAAIAACDERQVSGLLGGEGAGVGSLLSVVIR 468
            M+D  APR+ARASASRVVALMA AGGEWP+ W GLIPSL+GQLA+A AAV + R EAG      G  XXXXXXXXXXXXXXXX E+AVARAESCAKCLQYLTEEVPMEH P +FQQAFPGLV+A + +YLPRSIR RVFRIVRELF+SIGTLVSVRGE+RLLPGL+Q VPPWL+LVSKTLQSAVDGRA       G R +                       DF VELEGLRTAMVL+AHVPS VGDGHLGQ+LPPLW++LT G ERHERSML   GD  D               YASDGERQG +ELIV SLELLAA AAC + QVSGLLGGEGAGVGSLL+VVIR
Sbjct:    1 MIDVSAPRAARASASRVVALMATAGGEWPSGWGGLIPSLIGQLAMAAAAVENARAEAGSAEAPRGGVXXXXXXXXXXXXXXXXAEHAVARAESCAKCLQYLTEEVPMEHVPEVFQQAFPGLVEAGKADYLPRSIRRRVFRIVRELFTSIGTLVSVRGETRLLPGLQQCVPPWLHLVSKTLQSAVDGRA-----IDGGRHKNXXXXXXXXX-----------XXDFGVELEGLRTAMVLLAHVPSTVGDGHLGQLLPPLWQLLTDGRERHERSMLAGGGDGEDXXXXXXXXXXXXXXXYASDGERQGLDELIVQSLELLAATAACPDPQVSGLLGGEGAGVGSLLAVVIR 333          
BLAST of mRNA_P-littoralis_Contig6.2.3 vs. uniprot
Match: A0A6H5L9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Z1_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.920e-21
Identity = 60/105 (57.14%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   26 MDDVLSAALSADNTVRRTAEATLTYASTQRGWPVALAKRLSQNYTSTYHHDSYDRGARAA-----ERDDPTGGQRLMAGMLLQHYVRDRWEVACPTTLPRGDKEQ 125
            MD VL +ALSADNTVRR AEA L+YA TQRG+ +ALAK+L+ NY     +      ARAA     ERD      RLMAGMLLQH+VRDRWE+A    LP  DK Q
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNYHPRGAYVGDGNMARAAPAAERERDGMWMPMRLMAGMLLQHFVRDRWELADDAVLPAEDKIQ 105          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.2.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8B3_ECTSI4.480e-15561.16Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5L6E1_9PHAE9.050e-11969.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L9Z1_9PHAE1.920e-2157.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 26..395
e-value: 8.8E-22
score: 79.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 5..27
NoneNo IPR availablePANTHERPTHR10997:SF9IMPORTIN-9coord: 28..175
NoneNo IPR availablePANTHERPTHR10997IMPORTIN-7, 8, 11coord: 219..440
coord: 28..175
NoneNo IPR availablePANTHERPTHR10997:SF9IMPORTIN-9coord: 219..440
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 95..136
score: 9.938772
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 27..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:1103..24153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.2.3mRNA_P-littoralis_Contig6.2.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 1103..24153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.2.3 ID=prot_P-littoralis_Contig6.2.3|Name=mRNA_P-littoralis_Contig6.2.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=468bp
WSGLHLHRGHGCQTQQTKPSGEESGMDDVLSAALSADNTVRRTAEATLTY
ASTQRGWPVALAKRLSQNYTSTYHHDSYDRGARAAERDDPTGGQRLMAGM
LLQHYVRDRWEVACPTTLPRGDKEQVRAMVVATMVDPQAPRSARASASRV
VALMAAGGEWPARWSGLIPSLLGQLAVAVAAVAHVRGEAGGFGGGGGGGA
AAAAAAAAAAAAENAVARAESCAKCLQYLTEEVPMEHAPRLFQQAFPGLV
QASEVEYLPRSIRARVFRIVRELFSSIGTLVSVRGESRLLPGLKQYVPPW
LNLVSKTLQSAVDGRAGHPEGRTGARPEEAGVDVGVDIGDRGVGGGDSRG
GDFNVELEGLRTAMVLVAHVPSVVGDGHLGQVLPPLWEILTSGLERHERS
MLLVDGDSVDAPDDGAYASDGERQGFEELIVHSLELLAAIAACDERQVSG
LLGGEGAGVGSLLSVVIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR001494Importin-beta_N
IPR016024ARM-type_fold