prot_P-littoralis_Contig599.40.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig599.40.2
Unique Nameprot_P-littoralis_Contig599.40.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length354
Homology
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 4.470e-22
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    3 RARFNNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAEPYQSVYPSGNDSTCSSVPAA 85
            R  FNNGRWTKEEH+AFL G+ L+  +WDLIA +V+TR+A QVRTHGQK+F K++KGE FP EPY+S++      T SS  AA
Sbjct:    2 RRSFNNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASAA 84          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: D8LPL1_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL1_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.760e-15
Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MTRARFNNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAEPYQSVYPSGNDSTC 79
            M R R N G+WT+EEHEAFL G+  ++ +     +LV TR+A Q+RTH QK+F K+E+GE FPA+PY S Y + +  +C
Sbjct:    1 MVRIRKNKGKWTREEHEAFLSGLWQHESNSH---ALVPTRSALQIRTHAQKYFDKIERGEKFPAQPYPSQYDAASGKSC 76          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.860e-13
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    3 RARFNNGRWTKEEHEAFLFGVALYQ-GDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAE 65
            R R N GRWT EEH AFL GV  ++  +W  IA+L+ TRT  Q+RTH QK++AK++KGE FP E
Sbjct:    7 RIRRNKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDE 70          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 3.600e-13
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    5 RFNNGRWTKEEHEAFLFGVALYQ-GDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAEPYQSVY 71
            R N GRWT EEH  FL GV L++  D + +AS++ TRT  QVRTH QK+F K++KGE FP EPY S Y
Sbjct:    4 RRNKGRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPSQY 71          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 5.180e-13
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    5 RFNNGRWTKEEHEAFLFGVALYQ-GDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAEPYQSVY 71
            R N GRWT EEH  FL GV L++  D + +AS++ TRT  QVRTH QK+F K++KGE FP EPY S Y
Sbjct:    4 RRNKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQY 71          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.530e-13
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    5 RFNNGRWTKEEHEAFLFGVALYQ-GDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAEPYQSVYPSGNDSTCSSVPA 84
            R N GRWT EEH+AFL GV  ++  +W  IA+L+ TRT  Q+RTH QK++AK++KGE FP EPY S + +    + +S  A
Sbjct:    4 RRNKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSSASAGA 84          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A836CPG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.030e-11
Identity = 37/66 (56.06%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    2 TRARFNNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQKFFAKLEKGEAFPAEPY 67
            T   F  GRWT EEHE FL G+ALY   W LIA L+ TRT  QVRTH QK F K+ K EA    P+
Sbjct:   19 TEEEFQTGRWTAEEHERFLQGLALYNKQWKLIADLIRTRTVVQVRTHAQKHFQKVAKLEAQSGRPH 84          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A067CMU6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CMU6_SAPPC)

HSP 1 Score: 72.4 bits (176), Expect = 2.900e-11
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    7 NNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQKFFAKLEK 58
            N GRWT EEHE+FL G+ LY  +W  +AS ++TRT++Q+R+H QK+FAKL K
Sbjct:   37 NGGRWTDEEHESFLLGLNLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAK 88          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A485L4W6_9STRA (Aste57867_15960 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4W6_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.190e-11
Identity = 28/52 (53.85%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    7 NNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQKFFAKLEK 58
            N GRWT++EHE+FL G+ LY  +W  +A+ ++TRT++Q+R+H QK+FAKL K
Sbjct:   13 NGGRWTEQEHESFLAGLHLYGREWKKVAAKIKTRTSAQIRSHAQKYFAKLAK 64          
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Match: A0A6G0W7H2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7H2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.060e-11
Identity = 28/55 (50.91%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    7 NNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQKFFAKLEKGEA 61
            + GRWT+ EHE+FL G+ LY  +W  +A+ ++TRT++Q+R+H QK+FAKL K +A
Sbjct:   21 SRGRWTEAEHESFLLGLHLYGREWKKVAATIKTRTSAQIRSHAQKYFAKLAKDDA 75          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig599.40.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC35_9PHAE4.470e-2260.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPL1_ECTSI2.760e-1549.37HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D7FXJ4_ECTSI1.860e-1356.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVV5_9PHAE3.600e-1357.35HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D7FXQ4_ECTSI5.180e-1357.35HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5L149_9PHAE6.530e-1349.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CPG1_9STRA2.030e-1156.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067CMU6_SAPPC2.900e-1157.69Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A485L4W6_9STRA4.190e-1153.85Aste57867_15960 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0W7H2_9STRA5.060e-1150.91Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 7..55
e-value: 8.5E-10
score: 48.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 3..53
score: 7.282382
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 10..48
e-value: 5.98232E-9
score: 49.4962
NoneNo IPR availableGENE3D1.10.10.60coord: 10..57
e-value: 1.2E-12
score: 49.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..190
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 9..229
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 9..48
e-value: 2.9E-10
score: 40.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 3..57
score: 14.198407
IPR017884SANT domainPROSITEPS51293SANTcoord: 10..61
score: 10.044357
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 8..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig599contigP-littoralis_Contig599:118513..124850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig599.40.2mRNA_P-littoralis_Contig599.40.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig599 118279..124962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig599.40.2 ID=prot_P-littoralis_Contig599.40.2|Name=mRNA_P-littoralis_Contig599.40.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=354bp
MTRARFNNGRWTKEEHEAFLFGVALYQGDWDLIASLVETRTASQVRTHGQ
KFFAKLEKGEAFPAEPYQSVYPSGNDSTCSSVPAASLPQPFVVWASARHE
RRGHRGGGGGGGGGTSAATNTMPNENAPSSLSVDSAFCGRRGGSSSGGGG
SGGGSRGGLAQIHEMRRRHQQHLLAEQGQRQQEQQQQQLGAMALAGSVGW
TTSTGARSMMSPGGLTDLSDHNNNNNNGHPASMAAAPPPRAPFCSASLAD
PGSSSTADFAGAVTAAGAGWRGRRSPGVEYDGRDLGGGSSNWGLYGGPEC
QYFVDHHQPDHNNDRNVLSNVSSSSSRDAQPEFPRVTSEGNMNVLHDDVT
GTL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR017884SANT_dom
IPR009057Homeobox-like_sf