prot_P-littoralis_Contig598.5.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig598.5.4
Unique Nameprot_P-littoralis_Contig598.5.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length565
Homology
BLAST of mRNA_P-littoralis_Contig598.5.4 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 3.900e-191
Identity = 305/488 (62.50%), Postives = 352/488 (72.13%), Query Frame = 0
Query:   76 MNQTGDGVVTLWEFREYFDLPDDRSTTRLFRCFDEDRDNRIGFLELVVGLWTYCCNCNASLVCLCFDLYDTDHNGQIAPDEFDFMIQDVFGQRWEENDEAKAAHSWYHQRDDAVLGSPELDMNDWFTFVSASLQIQATAVRTRLILQRKIIGVGFWTYCLRKSTAIFLGRTATIERILSAHVSDAVLDELAHDRKLELDHDDSTQFNIRVLRRTGPFPRRRKYRAMAGKKTALKAAGAA-AGAAKNAKKYTTLTVREAFERVTVPAGQDAAWEEPKPPSTLQVLMASITAIAERPSPGGSALKSRTSPQSRREETGLSGSPSVATXXXXXXXXSRPPDALSLLKNRPGIDGDPLGSPAASPASPGHGGVEDDPAIANVFYGLKP--PAADPVPQKRRGGGGKAAPAFRRVTARAATGGSPSASTAAGAGAARPLSAGRGRAVGGGKSTLSRTGKELVCSGGIGGXXXXXXXXXXXXXXGALSSRVLGG 560
            MN+TG+G VTLWEFREYF+LPDDRSTTRLFRCFDEDRDNRIGFLELVVG+WTYCCNCNAS+VCLCFDL D DHNG+I  DEF+FMI DVFG  WE+NDEAKA H+W+H+RDDA+LG PE+DM+ W  FVSA+ QIQA AV TRL+LQ+K++GVGFWT+CL K+  IFLGRTAT+E+ILSAHVS  +L+ELA DR+LELDHDDSTQFN+RV+RRTGPFPRRRKYR MAGKK   KAA A  A AA N KK+ TLTVREAFERVTVPAG+DA WE+PKPPSTLQ LMAS+TAI ER  PGG+                        +          PPDAL+LLKNRPGIDG PLGSPA +P+SP    V+ DPAIAN FYGLKP   A  PV      G G+        TA+   G SP+AS+  G+           RAVGGGK TLSRTGKELV +G +G               G LS+R+LGG
Sbjct:    1 MNETGNGTVTLWEFREYFNLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFWTHCLPKNMTIFLGRTATVEQILSAHVSPNILEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMAGKKLRAKAAAAVGAVAADNVKKFATLTVREAFERVTVPAGKDATWEDPKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXX--XXSKKRKNNKKGAPPDALALLKNRPGIDGAPLGSPAVAPSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTAK--KGVSPAASSPEGS-----------RAVGGGKITLSRTGKELVGAGEVG----CVGVPGGEGGTGTLSARLLGG 469          
BLAST of mRNA_P-littoralis_Contig598.5.4 vs. uniprot
Match: A0A7S3M1J4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1J4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.100e-11
Identity = 54/218 (24.77%), Postives = 97/218 (44.50%), Query Frame = 0
Query:   55 IFAALGLHEWGVSRLWRHFRLMNQTGDGVVTLWEFREYFDLPDDRSTTRLFRCFDEDRDNRIGFLELVVGLWTYCCNCNASLVCLCFDLYDTDHNGQIAPDEFDFMIQDVFGQRWEENDEAKAAHSWYHQRDDAVLGSPELDMNDWFTFVSASLQIQATAVRT-RLILQRKIIGVGFWTYCLRKSTAIFLGRTATIERILSAHVSDAVLDELAHDRKL 271
            +F A+ L    + +L + F  ++    G + + E     D+       R+F  FD+DR  +I   E VV LW +C   + ++    FD+YDTD +G + PD+   M +++FG +  E+D  KA  +     D   +G         F     + Q   T V T +  L+   +GV  W     ++  + +GR+  I+ ++  H    +   L  D+ +
Sbjct:   20 VFKAMKLKNNEIKKLNKIFNSVDVDKSGSIEVVELLTLLDIERTPFNVRIFAAFDKDRTGQIDLYEFVVSLWKFCSLSDGAISVFAFDIYDTDADGLLTPDQVKKMFKELFGTKGMEHDATKAGLA-----DLLRMGEHGFVGIHVFRPYCKTHQALLTPVFTMQQKLRNATLGVSLWESLSNRNIEVHVGRSMPIKELMVLHSDRKLFHSLLEDQTI 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig598.5.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW22_ECTSI3.900e-19162.50EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3M1J4_9STRA2.100e-1124.77Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 50..208
e-value: 2.5E-18
score: 68.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..410
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 109..121
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 145..157
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 140..167
score: 8.766953
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 55..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig598contigP-littoralis_Contig598:33941..54286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig598.5.4mRNA_P-littoralis_Contig598.5.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig598 33462..54317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig598.5.4 ID=prot_P-littoralis_Contig598.5.4|Name=mRNA_P-littoralis_Contig598.5.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=565bp
MGGGVSISKDQGAAMHAAILGALPVGVYALEEMRYKIGSLYESPEFAQHQ
EICAIFAALGLHEWGVSRLWRHFRLMNQTGDGVVTLWEFREYFDLPDDRS
TTRLFRCFDEDRDNRIGFLELVVGLWTYCCNCNASLVCLCFDLYDTDHNG
QIAPDEFDFMIQDVFGQRWEENDEAKAAHSWYHQRDDAVLGSPELDMNDW
FTFVSASLQIQATAVRTRLILQRKIIGVGFWTYCLRKSTAIFLGRTATIE
RILSAHVSDAVLDELAHDRKLELDHDDSTQFNIRVLRRTGPFPRRRKYRA
MAGKKTALKAAGAAAGAAKNAKKYTTLTVREAFERVTVPAGQDAAWEEPK
PPSTLQVLMASITAIAERPSPGGSALKSRTSPQSRREETGLSGSPSVATT
TTTTTKKSRPPDALSLLKNRPGIDGDPLGSPAASPASPGHGGVEDDPAIA
NVFYGLKPPAADPVPQKRRGGGGKAAPAFRRVTARAATGGSPSASTAAGA
GAARPLSAGRGRAVGGGKSTLSRTGKELVCSGGIGGVGARGGGGDGNGGE
GALSSRVLGGVTAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair