mRNA_P-littoralis_Contig597.23.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig597.23.1
Unique NamemRNA_P-littoralis_Contig597.23.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 2.790e-101
Identity = 207/510 (40.59%), Postives = 284/510 (55.69%), Query Frame = 2
Query:  110 AELEIKEARMKEIVHVHSNLFTSDKVADSDLGTSVKLNHPAKLMLLHLGADKLLLLHSPASSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDK-HIVGRVDHFIVAHAPNTVPGKPS-SFTCNKKVTVDNITGDVSQLAAAADQRCMNVLKGVQFETAKTAFPAALVSFAINRWTVRGDTVISNVGDTGRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGRLPASVPANTTPVRVRGMYEEELKAAMDDDGVERAHVPDLAALLVAMTIAHDLGYFLSKDNDDGFGTLYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDSLVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGDTHHEVKNEVPRGRPV--TGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVM 1627
            ++ ++K     +  HVH  ++ S  V   DL T V    PAKL+ L+ GADK LL  +  +  R++ +  A   SG LH  GT+V  +P P   HA R++ A    G  LEVE+  + VE+ +RGGGR     D+ H+ GRV  F+VAH   T    PS  FTCN+ VT D++ G     A ++   C+N++K V FE A + FP  L++  INR+T   DTV+S  GD  + +E  LSLGRKVE+FP D  N+  ++ER    F+ AW +G+F R      GL  I  G LP +VP ++ P  V  + ++ + A   + G E +   D    LVA  ++  LGY L +D  D    LY     KY +N   IPIWG  EI+ +   AR S+  D      VRL+RVAD+ QLKQML  GKEFV PGA LY+RVA TCPAYYAR +SS+  THHE+ +EVPR +    T A+W       +TP+ L +YK +        VLVR G S +
Sbjct:  700 SDADMKSFLKDQNTHVHERVYYSHSVGVDDLLTHVGTKEPAKLLFLNPGADKTLLPDNATTLARIRDLTRALVASGSLHASGTVVCALPTPVYEHAHRWAGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG-----AESSSGPCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVDEMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQD-MMAEAGETGDEPS---DKVLTLVASKLSSTLGYALVQDGYDSSYALYTIPKMKYAMNGLEIPIWGDMEIHLSPAEARESLRADPVDGA-VRLIRVADSAQLKQMLVPGKEFVAPGATLYMRVAKTCPAYYARWESSDPFTHHEILSEVPRDKKKSDTHALWFDAEDNPKTPIKLRIYKGVTDTSEAQPVLVRPGGSAV 1199          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 1.360e-94
Identity = 201/509 (39.49%), Postives = 272/509 (53.44%), Query Frame = 2
Query:  113 ELEIKEARMKEIVHVHSNLFTSDKVADSDLGTSVKLNHPAKLMLLHLGADKLLLLHSPASSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDK-HIVGRVDHFIVAHAPNTVPGKPS-SFTCNKKVTVDNITGDVSQLAAAADQRCMNVLKGVQFETAKTAFPAALVSFAINRWTVRGDTVISNVGDTGRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGRLPASVPANTTPVRVRGMYEEELKAAMDDDGVERAHVPDLAALLVAMTIAHDLGYFLSKDNDDGFGTLYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDSLVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGDTHHEVKNEVPRGRPV--TGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVM 1627
            E +  +A MK  + V    + S  V   DL T V    PAKL+ L+ GADK LL  +  +  R++ +  A   SG LH  GT+V  +P P   HA R++ A    G  LEVE+  + VE+ +RGGGR     D+ H+ GRV  F+VAH   T    PS  FTCN+ VT D++ G     A ++   C+N++K V FE A + FP  L++  INR+T   DTV+S  GD  + +E  LSLGRKVE+FP D  N+  ++ER    F+ AW +G+F R      GL  I  G LP +VP ++ P  V  + ++ + A   + G E +                       KD  D    LY     KY +N   IPIWG  EI+ +   AR S+  D      VRL+RVAD+ QLKQML  GKEFV PGA LY+RVA TCPAYYAR +SS+  THHE+ +EVPR +    T A+W       +TP+ L +YK +        VLVR G S +
Sbjct:  321 EEDQSDADMKSFLKV----YYSHSVGVDDLLTHVGTKEPAKLLFLNPGADKTLLPDNATTLARIRDLTRALVASGSLHASGTVVCDLPTPVYEHAHRWAGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTADDVHG-----AESSSGPCLNLMKAVPFENALSPFPPRLLTMCINRFTNLQDTVVSTCGDRDKTIETALSLGRKVEVFPVDDRNVDEMRERVKDAFDIAWADGVFKREPDPAGGLRTISPGNLPDAVPRSSAPASVPTVVQD-MMAEAGETGDEPS----------------------DKDGYDSSYALYTIPKMKYAMNGPEIPIWGDMEIHLSPAEARESLRADRVDGA-VRLIRVADSAQLKQMLVPGKEFVAPGATLYMRVAKTCPAYYARWESSDPFTHHEILSEVPRDKKKSDTHALWFDAEDNPKTPIKLRIYKGVTNTSEAQPVLVRPGGSAV 796          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 1.920e-71
Identity = 183/546 (33.52%), Postives = 263/546 (48.17%), Query Frame = 2
Query:  110 AELEIKEARMKEIVHVHSNLFTSDKVADSDLGTSVKLNHPAKLMLLHLGADKLLLLHSPASSTRLK-LILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIVAHAPNTVPGKPSSFTCNKKVTVDNITG-------DVSQLAAAADQRCMNVLKG-VQFETAKTAFPAALVSFAINRWTVRGDTVISNVGDTGRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGRLPASVPANTTPVRVRGMYEEELKAAMDDDGVERAHVPDLAALLVAMTIAHDLGYFLSKDNDDGFGTLYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDS--LVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSE--GDTHHEVKNEVPR--GRPVTGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMAEELLDTYSGGGGEGGSEAGSG 1702
            AE ++K AR      +H +   S    D D+G     N  AKL+ + LG    LL  +P++   +K L+   C+    LHPEGT+++ +P P   H     E    PG+G+ VE+  L VEY +RGGG    S  K I G +DH+IVAH      G   +FTCN  VT  + TG       D S  + A+ +R  + L G V  +     +   +V FAI RWT  GDTV+S   ++  V+E  L+LGRKVE F    ++  ++  R    +  AW +GLF+   S  + +T I  G LP  +P  TTP R+            +   V+ A   + A L  A  IA  +G+ +  ++DD    L A++   Y    N IP+ G   +Y++   A  S++ +D S  L +VRLVRVAD   LK+M    +      A LY+RVA +CPAYYA C+  +     HHE+ + + R   R      +         PV L V   I    PG  V V  G+SV+ P       + SG G   GS+AG G
Sbjct:  100 AEYDVKVARRIASTCIHESTPLSSGFGDLDVGVLKLENGLAKLVFVPLGLHDHLLQENPSAQVHMKGLLYHVCKE--LLHPEGTVLVSLPVPIYKHQRCIVEHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNGCGDGGGMNFTCNDTVTPQSFTGRRSAGSSDGSTWSTASGRRIPSPLMGDVPRKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVECALNLGRKVEAFLVASEHHGAVTTRVEEAWEGAWRKGLFTDDGSASE-ITYISHGSLPDGIPETTTPNRILADVNTRTNNLREGGSVDGATPDERALLGAAQAIAEQMGWVIKVNSDDDLPYLCARNKTSYQTTHNDIPVSGNPVVYDSHGQALDSLNIEDHSTDLQFVRLVRVADNGLLKKMCPKNQIVKHSEAALYLRVAESCPAYYACCEQGKDKSSAHHEISSYLQRTDNRETLIGAFNDGVPGYHAPVRLVVTGRIAASNPGVAVCVDPGVSVICPQTSGP-SSLSGQGSPEGSDAGGG 641          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.730e-67
Identity = 181/544 (33.27%), Postives = 263/544 (48.35%), Query Frame = 2
Query:  110 AELEIKEARMKEIVHVHSNLFTSDKVADSDLGTSVKLNHPAKLMLLHLGADKLLLLHSPASSTRLK-LILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIVAHAPNTVPGKPSSFTCNKKVTVDNITG-------DVSQLAAAADQRCMNVLKG-VQFETAKTAFPAALVSFAINRWTVRGDTVISNVGDTGRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGRLPASVPANTTPVRVRGMYEEELKAAMDDDGVERAHVPDLAALLVAMTIAHDLGYFLSKDNDDGFGTLYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDS--LVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSE--GDTHHEVKNEVPR--GRPVTGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMAEELLDTYSGGGGEGGSEAG 1696
            AE ++K AR      +H +   S   +D D+G     N  AKL+ + LG    LL  +P++   +K L+   C+    LHPEGT+++ +P P   H     E    PG+G+ VE+  L VEY +RGGG    S  K I G +DH+IVAH   +  G   +FTCN  VT  + TG       D S  + A+ +R  + L G V  +     +   +V FAI RWT  GDTV+S   ++  V+E  L+LGRKVE F    ++  ++  R    +  AW +GLF+      + +T I  G LP  +P  TTP R+            +   V+     + A L  A  IA  +G+ +  +  D    L A++   Y    N IP+WG T +Y++   A  S++  + S  L +VRLVRVAD   LK+M    +      A LY+RVA +CPAYYA C+  +    THHE+ + + R   R      +         PV L V   I    PG  V V  G+SV+ P   +   + SG G   GS+AG
Sbjct:  601 AENDVKVARRIASTCIHESTPLSSGFSDQDVGVLKLENGLAKLIFVPLGLHDHLLQENPSAQVHMKGLLYHVCKE--LLHPEGTVLVSLPVPIYKHHRCIVEHLQQPGLGMVVEDHGLVVEYGSRGGGLTAESKKKFIGGALDHYIVAHHNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGRRIPSPLMGDVPHKGVTRGYHDNVVQFAIQRWTKAGDTVVSMHAESDGVVEGALNLGRKVEAFLVASEHHGAVTTRVEEAWEGAWRKGLFTDDGDASE-ITYISHGSLPDGIPEITTPHRILADVNTRTNNLREGGRVDGTTPDERALLGAAQAIAEQMGWAIKVNPVDDLPYLCARNKTSYRTAHNDIPVWGKTVVYDSHRQALDSLNVGNHSTDLQFVRLVRVADNELLKKMCPKNQVVKHSEAGLYLRVAESCPAYYACCEQGKDKSSTHHEISSYLQRTDNRETLIGAFNDGVPGYPAPVRLVVTGRIAASNPGVAVYVEPGVSVICPRTSDP-SSSSGQGSPQGSDAG 1140          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.460e-54
Identity = 155/487 (31.83%), Postives = 242/487 (49.69%), Query Frame = 2
Query:  233 KLMLLHLGADKLLLLHSPASSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHASRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIVAHAPNTVPGKPSSFTCNKKVTVDNITGDVSQLAAAADQRCMNVLKGVQFETAKTAFPAALVSFAINRWTVRGDTVISNVGDTGRVLELGLSLGRKVEIFPDDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQ---IKEGRLPASVPANTTPVRVRGMYEEELKAAMDDDGVERAHVPDLAALLVAMTIAHDLGYFLSKDNDDGFGT----LYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDSLVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGDTHHEVKNEVPRG---RPVTGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMAEELLDTYS 1663
            KL+++ +GA++ LL  S A++T L+ ++   R  G +HP+GTI L VP P  +H  R  EA     VGL VE+  L + Y  R GGR     + H+   +D  ++ H       + ++FTCNK+VTVD+  G  S  + +     M ++  V++E A T      + F INR+T  GDTV S   +   V+E  L   R+VE+F  + ++   +++  L+ F+ A+  G +  S S    L Q   I    LP  + AN  P  V    +    + M+ +G         A+L VA T+A + GY L        G+    L  + +  Y VN++ +P WG  E++N+   A  S+S D+     VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+      V G   +    A  TP+   V+++  K  P + + V  G +V+     E+ ++ S
Sbjct:  354 KLVIVSIGAEQRLLRTSEATNTHLRRVIDNVR--GRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVLLIH------NEGATFTCNKRVTVDDPFGFGSDASPS-----MQLMTDVEYEGAATDIVMRPLHFLINRYTHAGDTVASLSAERHNVVEAALERSRRVEVFVANPNSKEEVRKNLLASFSRAYKAGKWKASTS----LAQERVISPSCLPLGLEANVIPHEVHRFVD----STMNQEGPAMGEAE--ASLRVATTLAKEFGYSLESPEGWRSGSSEALLLPRRDMDYHVNSHDLPAWGQLEVFNSRPEAFHSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQVEGHAFATPMIGRVFRARSKTDPRSPLNVLPGFAVVRSQGFEVRESDS 817          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5K1L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1L5_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 3.570e-23
Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 2
Query: 1172 TLYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDS--LVYVRLVRVADTPQLKQMLTTGKE-FVQPGANLYVRVANTCPAYYARCDSSEGDTH-HEVKNEVPRGRPVTGAVWKSH-TGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMAEELLDTYSGGGGEGGS 1687
            TL+A D ++Y+V A+ +P+WG   + +++E A  SI  DDD+  L YVRL+ VADT  L++M    +E  V   A LY+RVA +CPA+YA  D SE +   HEV+N   R    +  V K   TG+ E PV L V + I  +  G  V V+ GLSV+ P   +  +T S    EGGS
Sbjct:   25 TLFALDAQRYNVGASDLPVWGEYIVSDSLEEAYASIKPDDDAENLQYVRLLHVADTQLLRRMCKEAEESVVSEDAGLYLRVAKSCPAFYALWDESEDNAGTHEVRNRCARTDSTSNLVAKFRGTGSTEFPVFLKVCQEIAAKNRGRGVHVQPGLSVVRPGWYKSPETESSSNDEGGS 201          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5K2Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z9_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.970e-21
Identity = 73/176 (41.48%), Postives = 101/176 (57.39%), Query Frame = 2
Query: 1175 LYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDD--SLVYVRLVRVADTPQLKQMLTTGKE-FVQPGANLYVRVANTCPAYYARCDSSEGDTH-HEVKNEVPRGRPVTGAVWKSH-TGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMAEELLDTYSGGGGEGGS 1687
            L+A D ++Y V A+ +P+WG   +Y++ E A  SI  DDD  +L YVRL+ VADT  L++M    +E  V   A LY+RVA +CPA+YA  D SE +   HEV+N   R    +  V K   TG+ E PV L V + I  +  G +V V+ GLSV+ P   +  +T S    EGGS
Sbjct:  430 LFALDAQRYKVGASDLPVWGEYIVYDSREEAYASIQPDDDDQNLQYVRLLHVADTQLLRRMCKEAEESVVSDDAGLYLRVAKSCPAFYALWDESEDNVGTHEVRNRCARTDSTSNLVAKFRGTGSTEFPVFLKVCQEIAAKNRGPVVQVQPGLSVVRPGWYQSPETESSSNDEGGS 605          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5KBS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS8_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 3.510e-17
Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = 2
Query: 1199 YDVNANVIPIWGTTEIYNTIEAARRSISKDDDSLVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGDTHHEVKNEVPRG---RPVTGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVMLPMAEELLDTYS 1663
            Y VN++ +P WG  E++N+   A RS+S D+     VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+      V G   +    A  TPV   V+++  K  P + + V  G +V+     E+ ++ S
Sbjct:    3 YHVNSHDLPAWGQLEVFNSRPEAFRSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQVEGQAFATPVIGRVFRARSKTDPRSPLNVLPGFAVVRSQGFEVRESDS 160          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5JUE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.300e-15
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 2
Query: 1199 YDVNANVIPIWGTTEIYNTIEAARRSISKDDDSLVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGDTHHEVKNEVPRG---RPVTGAVWKSHTGAVETPVALNVYKS 1570
            Y VN++ +P WG  E++N+   A RS+S D+     VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+      V G   +    A  TP+   V+++
Sbjct:    3 YHVNSHDLPAWGQLEVFNSRPEAFRSLSLDEREDQRVRLLHVANNVQLKRMLVPGKEGCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSRVEGQAFATPMIGRVFRA 129          
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Match: A0A6H5KEK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK0_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 5.000e-13
Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = 2
Query: 1199 YDVNANVIPIWGTTEIYNTIEAARRSISKDDDSLVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSSEGDTHHEVKNEVPRGRPVTGAVWKSHTGAVETPVALNVYKSIKKQQPGAMVLVRRGLSVM 1627
            Y VN++ +  WG  E++N+   A  S+S D      VRL+ VA+  QLK+ML  GKE   PGA LY+RVA TCP YY R  +       E  ++VP+         +    A  TP+   V ++  K  P + + V  G +V+
Sbjct:    3 YHVNSHDLTAWGQLEVFNSRPEAFHSLSVDKRQDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYTRWTNDVKQATVEFTSKVPQSGS-RAEFSQVEEKAFATPMIGRVVRARSKSDPRSPLNVLPGFAVV 144          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig597.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KN26_9PHAE2.790e-10140.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG8_ECTSI1.360e-9439.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ29_ECTSI1.920e-7133.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK41_9PHAE1.730e-6733.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBJ9_9PHAE1.460e-5431.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1L5_9PHAE3.570e-2341.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2Z9_9PHAE2.970e-2141.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBS8_9PHAE3.510e-1736.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUE7_9PHAE2.300e-1538.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEK0_9PHAE5.000e-1334.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig597contigP-littoralis_Contig597:110044..113309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1795
Hectar predicted targeting categoryother localisation
Exons6
Cds size1686
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig597.23.1prot_P-littoralis_Contig597.23.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig597 110141..113297 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791227.639559-UTR-P-littoralis_Contig597:110043..1101401680791227.639559-UTR-P-littoralis_Contig597:110043..110140Pylaiella littoralis U1_48UTRP-littoralis_Contig597 110044..110140 +
1680791227.73782-UTR-P-littoralis_Contig597:113297..1133091680791227.73782-UTR-P-littoralis_Contig597:113297..113309Pylaiella littoralis U1_48UTRP-littoralis_Contig597 113298..113309 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791227.6498117-CDS-P-littoralis_Contig597:110140..1101811680791227.6498117-CDS-P-littoralis_Contig597:110140..110181Pylaiella littoralis U1_48CDSP-littoralis_Contig597 110141..110181 +
1680791227.6622975-CDS-P-littoralis_Contig597:110393..1106651680791227.6622975-CDS-P-littoralis_Contig597:110393..110665Pylaiella littoralis U1_48CDSP-littoralis_Contig597 110394..110665 +
1680791227.6760967-CDS-P-littoralis_Contig597:110881..1112181680791227.6760967-CDS-P-littoralis_Contig597:110881..111218Pylaiella littoralis U1_48CDSP-littoralis_Contig597 110882..111218 +
1680791227.6854715-CDS-P-littoralis_Contig597:111551..1117321680791227.6854715-CDS-P-littoralis_Contig597:111551..111732Pylaiella littoralis U1_48CDSP-littoralis_Contig597 111552..111732 +
1680791227.7002308-CDS-P-littoralis_Contig597:112016..1122381680791227.7002308-CDS-P-littoralis_Contig597:112016..112238Pylaiella littoralis U1_48CDSP-littoralis_Contig597 112017..112238 +
1680791227.7214715-CDS-P-littoralis_Contig597:112664..1132971680791227.7214715-CDS-P-littoralis_Contig597:112664..113297Pylaiella littoralis U1_48CDSP-littoralis_Contig597 112665..113297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig597.23.1

>prot_P-littoralis_Contig597.23.1 ID=prot_P-littoralis_Contig597.23.1|Name=mRNA_P-littoralis_Contig597.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=562bp
MPADAELEIKEARMKEIVHVHSNLFTSDKVADSDLGTSVKLNHPAKLMLL
HLGADKLLLLHSPASSTRLKLILTACRTSGCLHPEGTIVLFVPPPTQSHA
SRFSEACAVPGVGLEVEESFLHVEYITRGGGRRKASHDKHIVGRVDHFIV
AHAPNTVPGKPSSFTCNKKVTVDNITGDVSQLAAAADQRCMNVLKGVQFE
TAKTAFPAALVSFAINRWTVRGDTVISNVGDTGRVLELGLSLGRKVEIFP
DDLDNIPSIKERALSKFNDAWNEGLFSRSLSGEDGLTQIKEGRLPASVPA
NTTPVRVRGMYEEELKAAMDDDGVERAHVPDLAALLVAMTIAHDLGYFLS
KDNDDGFGTLYAKDNEKYDVNANVIPIWGTTEIYNTIEAARRSISKDDDS
LVYVRLVRVADTPQLKQMLTTGKEFVQPGANLYVRVANTCPAYYARCDSS
EGDTHHEVKNEVPRGRPVTGAVWKSHTGAVETPVALNVYKSIKKQQPGAM
VLVRRGLSVMLPMAEELLDTYSGGGGEGGSEAGSGGASDNATGGMSDDFP
GLDAEVADAEG*
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mRNA from alignment at P-littoralis_Contig597:110044..113309+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig597.23.1 ID=mRNA_P-littoralis_Contig597.23.1|Name=mRNA_P-littoralis_Contig597.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3266bp|location=Sequence derived from alignment at P-littoralis_Contig597:110044..113309+ (Pylaiella littoralis U1_48)
TGAGGAGAGGGAGAAGCGCCGCGGTGCGGGCGCGGGTGCCAGCACCGACG GTAGCAGCACCAAGTCCAAGAAGAAGCGAAGGCAAAAGGCGGCGACCATG CCCGCGGACGCGGAGTTAGAGATAAAGGAGGCACGCATGTGAGACTCTTC ATCGAAGTATCATGTAAGGCTGCACATTGTTTTCCTTGTGCCAAACTTAG ATAGTTGCAGTTCACTGCTAGTTGCTCTACTCTTCAAGCCACGTGATAAC ATAGTGAAGTGGCTTGACTTGAACCATGCCGTCATAAGCGTTTTTCGTAA TCCAGCCCGCTCCGTCCTCGGCCCCATGCTGCTCCTCCTCCTCCACGCAG GAAGGAGATCGTGCACGTCCACAGCAATTTGTTTACCTCGGACAAAGTCG CAGACTCGGACTTGGGGACAAGTGTCAAGCTCAACCACCCCGCCAAGTTG ATGCTACTCCACCTCGGCGCCGACAAGTTGCTCCTCCTACACTCGCCCGC TAGCAGCACCCGCCTGAAACTTATTTTGACTGCGTGCCGTACTTCTGGGT GCCTGCACCCGGAAGGTACTATCGTGCTCTTCGTACCGCCCCCCACCCAA AGCCACGCGTCGCGTTTCAGCGGTGAGTTGAATCATTTGGCAGCCTCGCC GACTGTCCTGCTGTACCCGTGTGGAACTCGCGTCGTGGTTGAATCCTCTC GCTACAACATACAGCAATGGCCTTGTTTGTGTTGCTCGTATACATGTTGT GACACGCGTAGCAATCATATCCGTTCGGCGTACCCAACCAACGCATCCAA AACCTCGTATTTCATTTTTGTTGCACTATGCCCCACAGAAGCGTGCGCCG TGCCTGGCGTGGGCCTCGAGGTGGAGGAGAGTTTCCTGCATGTCGAGTAC ATTACAAGGGGCGGTGGGCGGCGCAAGGCCAGCCACGACAAGCACATTGT AGGTAGGGTCGACCACTTCATCGTTGCTCACGCACCCAACACCGTGCCTG GCAAGCCGAGCAGCTTCACGTGCAACAAGAAGGTGACGGTCGACAACATC ACCGGCGATGTATCGCAACTCGCTGCTGCTGCTGATCAGCGTTGCATGAA CGTGTTGAAGGGCGTTCAATTTGAGACTGCGAAGACGGCATTCCCGGCGG CACTTGTCTCGTTCGCAATTAACAGGTGTGTACGCACGGCTGGAGAATTC AAGAAGGGTGTACTATGTTGATCCACGGATGAAAAGTGATATCCCTAACC CTGCGGGCTGCAAACCTGTAGAAATTTTTGGCGGTAGGTATTTCGTTCAT GGGCGTGTTTGGTTTGCCCATCTGTTCTAAACAGCAGCTGAAAAACTCCC GTGATTTTTGCGCGCATCTGATCAGCCGAATCCTCACATCCCTAAAGTCG ACCAGGGTTTGTTTTCTTCTCTATCTTTCGTACGTGTCAGTTGTTTGAGC TTCCACCCATTGCCTGGCCGGCGAAATTCTCGCTTTTTGGGGCCGTTGGT CCATGCAGGTGGACTGTACGAGGTGACACAGTCATATCAAACGTGGGAGA CACCGGCCGCGTTCTGGAGTTGGGCCTGTCTCTCGGCAGGAAGGTCGAGA TCTTCCCCGATGACCTCGACAACATCCCGTCGATTAAGGAACGGGCTCTT TCGAAATTCAACGATGCATGGAATGAAGGCCTTTTCTCGGTAAGGGATGT ATATGGTTCGTGCGTTCTGTCGCTTAACGCTGGCCGGAGACCGGCGCGCG AAAGGGGTGATATCGACGAGTGACGCACACACACAACCGCTGCAGCCAAA ACCCTGAAATATTGACAGCAACGACGAAGTAATTCTGGTGTTTTGTTGAA CACAGTGATCTTAACCACCGTCAACAACCTATCCATGTGACATAATCCTC GTCTGAAACTGTTCTTCTCAACCACCTCCGTATCCACGCATCCATGTGAC ACCAATCCTGGTTTTTTACACAGCGCTCGCTTTCCGGTGAGGATGGACTA ACACAGATAAAGGAAGGACGGCTGCCAGCCTCTGTCCCGGCGAATACGAC GCCTGTACGTGTTAGGGGCATGTACGAGGAGGAACTCAAGGCGGCGATGG ATGATGACGGTGTAGAACGCGCGCATGTGCCGGACCTTGCGGCTCTTTTG GTAGCCATGACTATCGCTCACGATCTCGGCTACTTTCTAAGCAAGGTAAG CTGAAGTTTGGGTGGTGATGGGCTACCGGAAAACACCTACCTTTACCGCC GTGTACGACGCGCAAACAGCTCGACGTGTGGGTGGTGTGGATGACACGTC TGCATTTACCGCGACCATCGTAGCTCACAACAACAAGGGCACCATAAATC GGTGCTCTTTTCCTCTCCTACTTTCCTACGGAGATAAAATGTGTGCGCCA AAAACCCAACCTCATAAAGATAGGGGGCTCATCACATTTGGTTCCCCTGT TCTTATTTGCTGGCGTATAACCCGATTATTTGTGCCCTCTTCCTTACTGC CGGGAGCTGCATCCTCTCTCATATTCAAGTAATTGCACTTCTATCTGCCT TCACCCGACACGCGTGCCGCTTATTTGAACTCGCGACGGATGTTTTGTCC CTTACAACGCACTTGTTCCAGGATAACGACGACGGGTTCGGCACCCTGTA TGCTAAGGACAACGAAAAGTACGACGTCAACGCCAACGTCATCCCCATCT GGGGTACAACTGAGATCTACAACACCATCGAAGCGGCGAGAAGGTCGATT TCGAAAGACGACGACAGTCTTGTTTACGTGCGCCTCGTCCGCGTTGCGGA TACCCCTCAGCTCAAGCAAATGCTCACAACAGGGAAGGAGTTCGTTCAGC CGGGGGCCAACCTTTACGTCCGCGTGGCGAATACGTGCCCGGCATACTAC GCTCGGTGTGATTCCTCAGAGGGGGACACGCACCATGAGGTGAAAAACGA AGTCCCGCGGGGGAGGCCAGTCACCGGCGCGGTCTGGAAATCTCATACGG GCGCCGTCGAGACTCCTGTCGCACTCAACGTCTACAAATCCATTAAAAAA CAACAACCTGGTGCGATGGTTCTCGTCCGTCGCGGGCTGAGTGTCATGCT TCCGATGGCGGAGGAACTCTTGGACACCTACAGTGGTGGTGGCGGCGAAG GCGGCAGTGAAGCCGGTTCCGGGGGTGCGAGTGACAACGCCACCGGTGGG ATGAGCGACGACTTTCCTGGGTTGGACGCCGAAGTCGCGGATGCCGAGGG CTGACAGCTCGGTGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig597:110044..113309+

>mRNA_P-littoralis_Contig597.23.1 ID=mRNA_P-littoralis_Contig597.23.1|Name=mRNA_P-littoralis_Contig597.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1686bp|location=Sequence derived from alignment at P-littoralis_Contig597:110044..113309+ (Pylaiella littoralis U1_48)
ATGCCCGCGGACGCGGAGTTAGAGATAAAGGAGGCACGCATGAAGGAGAT
CGTGCACGTCCACAGCAATTTGTTTACCTCGGACAAAGTCGCAGACTCGG
ACTTGGGGACAAGTGTCAAGCTCAACCACCCCGCCAAGTTGATGCTACTC
CACCTCGGCGCCGACAAGTTGCTCCTCCTACACTCGCCCGCTAGCAGCAC
CCGCCTGAAACTTATTTTGACTGCGTGCCGTACTTCTGGGTGCCTGCACC
CGGAAGGTACTATCGTGCTCTTCGTACCGCCCCCCACCCAAAGCCACGCG
TCGCGTTTCAGCGAAGCGTGCGCCGTGCCTGGCGTGGGCCTCGAGGTGGA
GGAGAGTTTCCTGCATGTCGAGTACATTACAAGGGGCGGTGGGCGGCGCA
AGGCCAGCCACGACAAGCACATTGTAGGTAGGGTCGACCACTTCATCGTT
GCTCACGCACCCAACACCGTGCCTGGCAAGCCGAGCAGCTTCACGTGCAA
CAAGAAGGTGACGGTCGACAACATCACCGGCGATGTATCGCAACTCGCTG
CTGCTGCTGATCAGCGTTGCATGAACGTGTTGAAGGGCGTTCAATTTGAG
ACTGCGAAGACGGCATTCCCGGCGGCACTTGTCTCGTTCGCAATTAACAG
GTGGACTGTACGAGGTGACACAGTCATATCAAACGTGGGAGACACCGGCC
GCGTTCTGGAGTTGGGCCTGTCTCTCGGCAGGAAGGTCGAGATCTTCCCC
GATGACCTCGACAACATCCCGTCGATTAAGGAACGGGCTCTTTCGAAATT
CAACGATGCATGGAATGAAGGCCTTTTCTCGCGCTCGCTTTCCGGTGAGG
ATGGACTAACACAGATAAAGGAAGGACGGCTGCCAGCCTCTGTCCCGGCG
AATACGACGCCTGTACGTGTTAGGGGCATGTACGAGGAGGAACTCAAGGC
GGCGATGGATGATGACGGTGTAGAACGCGCGCATGTGCCGGACCTTGCGG
CTCTTTTGGTAGCCATGACTATCGCTCACGATCTCGGCTACTTTCTAAGC
AAGGATAACGACGACGGGTTCGGCACCCTGTATGCTAAGGACAACGAAAA
GTACGACGTCAACGCCAACGTCATCCCCATCTGGGGTACAACTGAGATCT
ACAACACCATCGAAGCGGCGAGAAGGTCGATTTCGAAAGACGACGACAGT
CTTGTTTACGTGCGCCTCGTCCGCGTTGCGGATACCCCTCAGCTCAAGCA
AATGCTCACAACAGGGAAGGAGTTCGTTCAGCCGGGGGCCAACCTTTACG
TCCGCGTGGCGAATACGTGCCCGGCATACTACGCTCGGTGTGATTCCTCA
GAGGGGGACACGCACCATGAGGTGAAAAACGAAGTCCCGCGGGGGAGGCC
AGTCACCGGCGCGGTCTGGAAATCTCATACGGGCGCCGTCGAGACTCCTG
TCGCACTCAACGTCTACAAATCCATTAAAAAACAACAACCTGGTGCGATG
GTTCTCGTCCGTCGCGGGCTGAGTGTCATGCTTCCGATGGCGGAGGAACT
CTTGGACACCTACAGTGGTGGTGGCGGCGAAGGCGGCAGTGAAGCCGGTT
CCGGGGGTGCGAGTGACAACGCCACCGGTGGGATGAGCGACGACTTTCCT
GGGTTGGACGCCGAAGTCGCGGATGCCGAGGGCTGA
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