mRNA_P-littoralis_Contig1154.4.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 1318 bits (3411), Expect = 0.000e+0 Identity = 649/654 (99.24%), Postives = 651/654 (99.54%), Query Frame = 1
Query: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKNS 1962
MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGP DEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALD+LMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEA NALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDK +
Sbjct: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPCDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDKLMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKT 654
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI) HSP 1 Score: 1303 bits (3373), Expect = 0.000e+0 Identity = 643/654 (98.32%), Postives = 644/654 (98.47%), Query Frame = 1
Query: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKNS 1962
MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNT KANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXX KASEP TWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHEL D LLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGE GIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEA NALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDK +
Sbjct: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTNKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXXXXKASEPTTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELADSLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGEFGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKT 654
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 1061 bits (2745), Expect = 0.000e+0 Identity = 543/804 (67.54%), Postives = 586/804 (72.89%), Query Frame = 1
Query: 10 RGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ-------------------------------------------------------------------------------------------GSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGA--------------------------------------------------------------LILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKNS 1962
RG+VHPRDAEAW+TAF+D+EGGGQGQLVVS+AD+TWRVILCWASAGRRI+VD +GIPFSL+ LQ G+P QNKNALDGGNYFRNLYSILLERDIGE EFD WVSGDT+PP LTLRHL KWL+ TKA VVVWSHRGTGA++ GPS+ KT+LRPPTLHVGVREGHVYRLVL G WR+RFGS +DV +E+ +RT+R+FRRI+E TEEEEEPD TG GTKTFSCVADIVSDI+A QT K SE KTWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPA GI IRTWCSASMG LDPD+FEPDQATRLIELH+ALGLKFYRGVLDFRVSSQYSQSLLALL VCWRGPIVGAED SGS YGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGH+IEDWTLYII+LDAL EPDVFLNADVTPVFGRNYKRYLDLID APRHRVTHFVRPSRTV +CHI LVRDLL HELGDPLLEDADCAR+FKKGIFVRASGMLQQRYA+RIDAVMVTS DEASAVGGK+VPVLCEVDR KAELRTGQG+LGI++L TGDAYLCFDAERTWYRDGFWALGA LILDETRLRVLEA NALES GASDFSYQCDAVFFRG SV+++MRL F HLFSGD+ +
Sbjct: 99 RGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDPTGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRFGSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCARRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAXDEASAVGGKIVPVLCEVDRVKAELRTGQGALGIESLRTGDAYLCFEAERTWYRDGFWALGTLILDETRLRVLEARNALESFGASDFSYQCDAVFFRGSSSVQDKMRLRFDHLFSGDEKT 902
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 1040 bits (2689), Expect = 0.000e+0 Identity = 522/753 (69.32%), Postives = 570/753 (75.70%), Query Frame = 1
Query: 4 WRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ--------------------------------------------------------------------------------------------GSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTK-TFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKA-SEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKNSRHSQVR 1980
WRRGLVHPRDA+AWKTAFID+EGGG+GQLVVSAADDTWR ILCW SAGRRIE+D GIP SL +LQ G+ +NALDGGNYFRNL+S+LL+RD+G EEFDTW+SG ++PP LTLR L KWLN T+ANVVVWSHRG+G V GP D+KT+LRP LHVGVREGHVYRL L GPWR+RFGS +DV IE+ ++T RRFRRIAE EE+++PD T CG+K TF CVADIVSD++A NQ+E KR K SE TWYAPPGT LDELMLHLHLVGVSC GRL++YSHWDSLSLPAHGITIRTWCSASMGGLDPDE EPDQATRLIELHN LGLKFY GVLDFRVSSQYSQSLLALLEVCWRGPIVGAE+VSG+SYG EDWQCDINGAHTAALM+ME VPVFGH+DEVEE+D H IEDWTLYIIELDA +PDVF NADVTPVFGRNYKRYLDL+DTA RHRVTHFVRPSR V CHIP LVRDLL HE GDP L+DADCARKFKKGIFVRASGMLQQRYA+RIDAVMVT CDEASAVGGK+VPVL EVDR KAELRTGQG+LGIE+LRTGDAYLC DAERTWYRDGFWALGALILDETRLRVLEA NALESCGA DFSYQCDAVFFRG SV+E+MRL F LF GD+ +R
Sbjct: 100 WRRGLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNLQVRAGIESSSPRFRQLNIASFGHRVVRYEPLTTFCMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVDPITGSFMNSTGGGRRREGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRFGSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEFNTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGDETKTPGTLR 852
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: D7G6J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J5_ECTSI) HSP 1 Score: 979 bits (2531), Expect = 0.000e+0 Identity = 483/485 (99.59%), Postives = 483/485 (99.59%), Query Frame = 1
Query: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV 1455
MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNT KANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYII LDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV
Sbjct: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTNKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLV 485
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE) HSP 1 Score: 972 bits (2512), Expect = 0.000e+0 Identity = 506/765 (66.14%), Postives = 547/765 (71.50%), Query Frame = 1
Query: 10 RGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ--------------------------------------------------------------------------------------------GSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCS-GRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDIN----------------------------------------GAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCS 1905
RG+VHPRDAEAW+TAF+D+EGGG GQLVVSAADDTWRVILCWASAGRRI+VD +GIP SLV+LQ G+PVQNKNALDGGNYFRNLYSILLERDIGE +FD WVSGD +PP T TKA+VVVWSHRGTGA++ GP D KTNLRPPT+HVGVREGHVYRLVL GPWR+RFGS +DV IE+ +RT+R+FRRI+E TEE+EEPD TG G KTFSCVADIVS+ KTWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPAHG+ IRTWCSASMGGLDPD+FEPDQATRLIELHNALGLKF+RGVLDFRVSSQYSQSLLALLEVCWRGPIVGAED SGSSYGREDWQCDI AALMNMETVPVFGHMDEVEEFDGH+IEDWTLYI++LDAL EPDVF NADVTPVFGRNYKRYLDLID APR+RVTHFVRPSRTV RCHIP LV+DLL HELGDPLLEDADCAR+FK GIFVRASG+LQQRYA+RIDAVMVTS DEASAVGGK+VPVLCEVDR KAELRTGQG+LGI++LRTG+AYLCFDAERTWYRDGFWALG L LDETRLRVLEA NAL GASDFSYQCDAVFFRG S
Sbjct: 77 RGMVHPRDAEAWRTAFVDVEGGGLGQLVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDVDPTGAFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSILLERDIGEVKFDKWVSGDAEPPASTPSRKVALDYMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHRVRTYRKFRRISEMTEEKEEPDPTGFGAKTFSCVADIVSEC----------------------------KTWYAPPGTALDELMLHLHLGGVSCKKGKLTNYSRWDSLSLPAHGLIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDIXTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIVKLDALGEPDVFHNADVTPVFGRNYKRYLDLIDNAPRYRVTHFVRPSRTVSRCHIPKLVKDLLAHELGDPLLEDADCARRFKNGIFVRASGLLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALGTLTLDETRLRVLEARNAL---GASDFSYQCDAVFFRGSSS 810
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 876 bits (2263), Expect = 2.540e-311 Identity = 459/740 (62.03%), Postives = 495/740 (66.89%), Query Frame = 1
Query: 13 GLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ---------------------------------------------------------------------------------------------GSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGD 1953
G+VHPRDAEAW+TAF+++EGGG GQLVVSAAD++WRVILCWASAGRRIEVD GIP SLV LQ G+PV NKNALDGGNYFRNLYSILLERDIGE EFDTWVSGD +PP LTL HL KWL+ T A+VVVWSHRGTGA++ GPSD KTNL+PPTLHVGVREGHVYRLVL GPW +RFGS +DV I++ +RT+R+FRRI+E T EE+EPD TG GTKTFSCVADIVSDI+A NQT R K +E KTWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPAHG+ IRTWCSASMGGLDPD+FEPDQATRLIELHNALGLKF+RGVLDFRVSSQYSQSLLALLEVCWRGPIVGAED SGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGH+IEDWTLY I+LDAL EPDVFL+ADV PVFGRNYKRYLDLID APRHRVTHFVRPSRTV RCHIP LVRDLL HEL ERTWYRDGFWALGALILDETRLRVLEA NALE CGASDFS+QCDAVFFRG SV+E MRL F LFSG+
Sbjct: 80 GMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVILCWASAGRRIEVDT-GIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQVYLLKKTKERRRFGFRDVDPTGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPVEKRKHGR-KVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHEL-----------------------------------------------------------------------------------------ERTWYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGSSSVQENMRLRFNQLFSGN 728
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE) HSP 1 Score: 867 bits (2241), Expect = 9.110e-302 Identity = 456/702 (64.96%), Postives = 492/702 (70.09%), Query Frame = 1
Query: 79 QGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ--------------------------------------------------------------------------GSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKNS 1962
+G LVVSAADDTWRVILCWASAGRRI+VD +GIP SLV+LQ G+PVQNKNALDGGNYFRNLYSILLERDIGE EFD WVSGDT+PP LTL HL KWL+ TKA+VVVWSHRGTGA++ GP D KTNLRPPT+HVGVREGHVYRLVL GPWR+RFGS +DV IE HR EPD TG G KTFSCVADIVSDI+A QT K SE KTWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPAHG+ IRTW SASMGGLDPD+FEPDQATRLIELHNALGLKF RGVLDFRVSSQYS+SLLALLEVCWRGPIVGAED SGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGH+IEDWTLYII+LDAL VTH+V PSRTV RCHIP L++DLL HELGDPLLEDAD AR+ KK +RA CDEASAVGGK+VPVLCEVDR KAELRTGQG+LGI++LRTG+AYLCFDAERTWYRDGFWAL L LDETRLRVLEA NALESCGASDFSYQCDAVFFRG SV+E+M L F HLF+GD+ +
Sbjct: 100 RGMLVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDGAPVQNKNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIE-----HR-------------EPDPTGFGAKTFSCVADIVSDIMAIKQTGGDHSRQPVEKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGLIIRTWFSASMGGLDPDDFEPDQATRLIELHNALGLKFCRGVLDFRVSSQYSKSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDAL---------------------------------VTHYVGPSRTVSRCHIPKLMKDLLTHELGDPLLEDADYARRVKKRN-IRAG-----------------QCDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALRTLTLDETRLRVLEARNALESCGASDFSYQCDAVFFRGSSSVQEKMVLRFDHLFTGDEKT 732
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 865 bits (2236), Expect = 1.590e-298 Identity = 440/753 (58.43%), Postives = 520/753 (69.06%), Query Frame = 1
Query: 1 MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ------------------------------------------------------------------------------GSPVQNK--------------NALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERF--------GSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTG--QGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGD 1953
M RR LVH DA+AW+ AF+D+EGGG GQLVVSAAD+TWRVILCW S GRRI+V+ GIP SLVDLQ G+ + ++ NALDGGNYFRNLYSI+LERD+G EF W+SG+ P +T+RHL KWL TTKA+VVVWSHRG+GA+V G + T+LRP LHVGVREGHVYRLVL GPW++RF G + V +E+ +RT R FRRIAE EE E +++ T+ F AD+ IL ++QT+ +KA KTWYAPPGTALDELMLHLHL GV+C+GRL++YSHWDSLSLPAHGI IRTWC ASMGGLDPD E D+ATRLIELH LG K RGV+DFRVSS+YS SLLALLEVCWRGPIVGAED SG++YG DWQCDINGAHTAA+++ME +P F HMDEV+ FDGHDIEDWTLY++ L+A+ +PDVFLNADVTPVFGRNYKRYL LI T HRV+HFVRP+RT+ +CHIP LV+DLL +LG+PLL+D D AR+FKKG+FVR SG+LQQR+A+RI+AVMVT+ EA AVGGK+VPVL EV+R K+ELR G LGIE L +GDAYLCF+A R WYRDGFWALG LILDETRLRVLE N LE+CG S FSYQCDAVFFRGP V+EE R + H FSG+
Sbjct: 104 MLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRGRRIDVNQHGIPTSLVDLQVRAGVISEDPRFRQLNIASFGHRLVRYDPLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTD-DKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARHLYEHCFSGE 855
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 861 bits (2225), Expect = 1.800e-296 Identity = 466/754 (61.80%), Postives = 499/754 (66.18%), Query Frame = 1
Query: 61 DIEGGGQGQLVVSAADDTWRVILCWASAGRRIEVDPRGIPFSLVDLQ------------------------------------------------------------------------------GSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRAS-------------------------------GMLQQR--------------YANRIDAVMVTSCDEA-----------SAVGG---------KVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEASNALESCGASDFSYQCDAVFFR 1893
D+ GGG GQLVVSAADDTWRVILCWASAGRRI+VD +GIP SLV LQ G+PVQNKNALDGGNYFRNLYSILLERDIGE EFD WVSGDT+PP LTL HL KWL TKA+VVV SHRG GA+ GPSD KTNLRPPT+HVGVREGHVYRLVL GPWR+RFGS +DV IE+ +RT+R+FRRI+E TEEEEEPD TG G KTFSCVADIVSDI+A QT K SE KTWYAPPGTALDELMLHLHL GVSC RL+NYSHWDSLSLPAHGI R+WCSASMGGLDPD+FEPDQATRLIELH KF RGVLDFRVSSQYS+SL ALLEVCWRGP+VGAED SGSSYGREDWQCDINGAHTAALMNMETVPV GHMDE PDVFLNADVTPVFGRNYKRYLDLID APRHRVTHFVRPSRTV RCHIP LV+DLL HELGD LLED DCAR+FKK IFVRAS G+ R Y + A+ + DE + GG ++V VLCEVDR KAELRTGQG+LGIE+LRT DAY+CFDAERTWYRDGFWALG LILDETRLRVLEA NALESCG SD SYQCDAVFFR
Sbjct: 196 DMRGGGHGQLVVSAADDTWRVILCWASAGRRIDVDIQGIPISLVILQLNMATFGHRVVRYAPVTTFGKKWQEQLPGASLAVLVADAWRDSQVDLIKARERRRFGFRDADPTGAFMISSRGGRPKRGAPVQNKNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLYMTKASVVVGSHRGPGANTLGPSDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHRVRTYRKFRRISEMTEEEEEPDTTGFGAKTFSCVADIVSDIMAIKQTREDHNRQPVEKERKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCISRLTNYSHWDSLSLPAHGIITRSWCSASMGGLDPDDFEPDQATRLIELH-----KFCRGVLDFRVSSQYSKSLFALLEVCWRGPMVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVLGHMDE------------------------PDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVQDLLAHELGDHLLEDDDCARRFKKEIFVRASVTRLRLWVEIVLVLCEVDRVKAELRTGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGAVTRLRLWVEIVLVLCEVDRVKAELRTGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGSDLSYQCDAVFFR 920 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1154.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1154.4.2 >prot_P-littoralis_Contig1154.4.2 ID=prot_P-littoralis_Contig1154.4.2|Name=mRNA_P-littoralis_Contig1154.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=662bp MWRRGLVHPRDAEAWKTAFIDIEGGGQGQLVVSAADDTWRVILCWASAGRback to top mRNA from alignment at P-littoralis_Contig1154:15809..18067- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1154.4.2 ID=mRNA_P-littoralis_Contig1154.4.2|Name=mRNA_P-littoralis_Contig1154.4.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2259bp|location=Sequence derived from alignment at P-littoralis_Contig1154:15809..18067- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1154:15809..18067- >mRNA_P-littoralis_Contig1154.4.2 ID=mRNA_P-littoralis_Contig1154.4.2|Name=mRNA_P-littoralis_Contig1154.4.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1986bp|location=Sequence derived from alignment at P-littoralis_Contig1154:15809..18067- (Pylaiella littoralis U1_48)back to top |