mRNA_P-littoralis_Contig596.28.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig596.28.1
Unique NamemRNA_P-littoralis_Contig596.28.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A6H5L845_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L845_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 6.510e-158
Identity = 213/255 (83.53%), Postives = 231/255 (90.59%), Query Frame = 1 
Query:  193 WMSTMDLEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIPHKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAPFLEQSLGNMRHRMTVQLPDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAWLTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANF 957
            WMSTMDLEIAAGYGECSVCFEHLC KGASVM DG+G QAG  R E LPRRVCRHFLCQECAPTIIP KCPVCRRDFV+TLDVPDP+ADP RWFH+VD DQNG+IEK+ELVDALKGMFPVEPGALEEVIEMNWR WD D+NGTLD+ EFR+RLAPFL QS+GNMR R+  QLPDL +QPAEWF+HWDEDESGSLER EIVRALIKTIP ++GRDE WL GTF AIW++IDPDGDG ITGAEFMMPGGLYETL+ANF
Sbjct:   32 WMSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGHQAGFLRAERLPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPIADPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEVIEMNWRSWDTDSNGTLDTAEFRNRLAPFLAQSIGNMRQRIIRQLPDLMNQPAEWFKHWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDGDGSITGAEFMMPGGLYETLVANF 286
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BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: D7FYD8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD8_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.510e-54
Identity = 85/99 (85.86%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:  196 MSTMDLEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIPHKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQ 492
            MSTMDLEIAAGYGECSVCFEHLC KGASVM DG+GQQAG  R E LPRRVCRHFLCQECAPTIIP KCPVCRRDFV+TLDVPDP+ DP RWFH+VD DQ
Sbjct:    1 MSTMDLEIAAGYGECSVCFEHLCAKGASVMVDGSGQQAGFLRAERLPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPITDPVRWFHVVDRDQ 99
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BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: D7FYD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD7_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 2.470e-46
Identity = 76/93 (81.72%), Postives = 84/93 (90.32%), Query Frame = 1 
Query:  679 MRHRMTVQLPDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAWLTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANF 957
            MR R+T QLPDLKDQPAEWF++WDEDESGSLER EIVRALIKTIP ++GRDE WL GTF AIW++IDPD DG ITGAEFMMPGGLYETL+ANF
Sbjct:    1 MRQRITPQLPDLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDEDGSITGAEFMMPGGLYETLVANF 93
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BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A0G4H6Z1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H6Z1_9ALVE)

HSP 1 Score: 160 bits (406), Expect = 2.000e-40
Identity = 95/272 (34.93%), Postives = 140/272 (51.47%), Query Frame = 1 
Query:  172 PTRRTDIWMSTMDLEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIPHK---CPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAPFLEQSLGNMRHRMTVQL-----PDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAWLTGT---FQAIWNLIDPDGDGFITGAEFMMPGGLYETLLAN 954
            P R T    +    +    Y EC +CF+ L  +  +V+T         +R     RR C+H   + C   +   +   CP+CRRDF  TLDVPDP  DP+ WF +VD D NG +++ E+++ LK   PV+   LE  ++  WR+WD D +G +   E  D     L      +R+ M V+      PD++ + + WFR+WDE+ +GSL++ E+ RA IKT      RD   + G      A+W   DPDG G I   EF+   GL +T+LAN
Sbjct:  160 PPRITSTTSTMRSCDANEEYAECPICFDELYKEPQAVLT---------WRG----RRCCQHVFHKRCVGDMRRARQKHCPLCRRDFDDTLDVPDPTKDPRGWFRVVDLDGNGKLDRKEVIEVLKAALPVDWKKLEARLDNLWRQWDLDGSGFISEREMLDPQRGLLVW----VRNHMDVRRNRGPPPDIRREKSGWFRYWDENSNGSLDKEEVCRAFIKTFNL--SRDSEKVAGVRALLDALWVEFDPDGSGGIDEGEFVQREGLADTILAN 412
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BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A4S2X8_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S2X8_OSTLU)

HSP 1 Score: 149 bits (377), Expect = 5.710e-37
Identity = 94/303 (31.02%), Postives = 150/303 (49.50%), Query Frame = 1 
Query:  118 KNEIGSSAHKENKSRAIDPTRRTD-IWMSTMD--------LEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIPH---KCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEF--RDRLAPFLEQSLGNMRHRMTVQLPDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAW----LTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANFNWEHR 972
            KN   ++A  E ++      R TD +W  T D        L ++  + EC  CFE LC +  +V  D +G             R C+HFL + CA  +  H    CP+CR  F +   VP P  D   WF L D D NG ++K +++  ++   PV+   +++ +   W RWD +++G L   +    D L  F+ +     R R    +P + D+ A WF+ WDED+SG+LE+ E+VRALIKT   +  +D+      +    ++IW + D D  G I   EF++  GL ++++A F  + R
Sbjct:   41 KNADATTAVLERENERRRSRRSTDDVWCGTSDDEGSARGGLHVSEDHQECGACFEPLCKERTAVFVDESGA------------RTCKHFLHERCARAVCEHIGSVCPICRTAFASARGVPFPTEDANEWFRLCDVDGNGKLDKEQVLTVIRAQIPVDWRKIDKDLGSLWARWDPESSGALGKAQLVGADGLLEFVSKKYPP-RLREYKHVPHVTDKRA-WFKFWDEDDSGTLEKDEVVRALIKT---FGIKDDVAHIQDVRSMVESIWCVFDLDDSGGIDLTEFLLEDGLGDSIMAAFAVDKR 326
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BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A7J6M912_PEROL (RING-type domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M912_PEROL)

HSP 1 Score: 135 bits (339), Expect = 2.730e-30
Identity = 88/277 (31.77%), Postives = 126/277 (45.49%), Query Frame = 1 
Query:  211 LEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIP--------------HKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAPFLEQSLGNMRHRMTVQL-------PDLKDQPAEWFRHWDEDESGSLERREIVRALIKTI-------PAYSGRDEAWLTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANF 957
            L +A  Y EC+VC+  L                G+ R ++  +R C H+   EC   ++                +CP+CR  F     +PD   DP+ WF L D D  GT++K E++ AL  + PVE   L E IE NW  WD DN+G++  TEF +      E  L N     T  L       PDL   P EWF  WD + +GSLER EIVRA+++T        P++    +      F  IW+ +     G +T  EF  P G+ + +  N+
Sbjct:  123 LSLAERYNECAVCYFELYRL-----------PVGILRSQS--KRACSHYFHTECIKRLVAKNAHEARNAGHAAVRECPICRAKFSDIKTLPDVFKDPRAWFQLCDIDCGGTLDKEEVLGALGAVLPVERDKLAEAIEENWVVWDPDNDGSITLTEFVEPRRGLREYLLRNFNVIKTENLNIRPDDIPDLDSHPLEWFNFWDGNGNGSLERSEIVRAIVRTFCVSPSGEPSFKRAFDLREMALF--IWDSLGYHEFGELTFEEFNAPFGVGDQIYHNY 384
[Close]
BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A7J6MPS5_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MPS5_PERCH)

HSP 1 Score: 129 bits (323), Expect = 8.630e-30
Identity = 84/264 (31.82%), Postives = 130/264 (49.24%), Query Frame = 1 
Query:  220 AAGYGECSVCFEHLCTKGAS---VMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIP---HKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAPFLEQSLGNMRHRMTVQ--------LPDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAWLTGT----FQAIWNLIDPDGDGFITGAEFMMPG-GLYETLLAN 954
            A  + EC++C++ L  K  +   V+T  +G            RRVC H+   +C   ++     +CP+CR  + + L +PD   DPQ WF  VD + +G ++K E++  LK   P+    LE+  +  +RRWD   +G +   ++R+ + P    S      R   +        +P+L++  + WF++WDED +G L+R E+ RALIKT      RD      T      A+W   D DGDG I   EF   G GL +T LAN
Sbjct:   60 AEEHAECAICYDTLPGKANAPVCVLTGSDG------------RRVCPHYFHVDCVKYMLSAGQRQCPLCRTPYRSYLTIPDIDMDPQGWFKAVDLNGDGKLDKQEVMFVLKSTLPINHQRLEKDFDKLFRRWDVSGDGYI---QYRELMGPGGLVSFVRSNFRRNTKDLSQGMSGMPNLRENKSAWFKYWDEDGNGVLDREEVTRALIKTFGWQ--RDSLDQNSTARMVIDALWCDFDTDGDGTIDSMEFCRSGSGLADTFLAN 306
[Close]
BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A7J6NT57_PEROL (RING-type domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NT57_PEROL)

HSP 1 Score: 133 bits (335), Expect = 2.060e-29
Identity = 87/277 (31.41%), Postives = 126/277 (45.49%), Query Frame = 1 
Query:  211 LEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIP--------------HKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAPFLEQSLGNMRHRMTVQL-------PDLKDQPAEWFRHWDEDESGSLERREIVRALIKTI-------PAYSGRDEAWLTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANF 957
            L +A  Y EC+VC+  L                G+ R ++  +R C H+   EC   ++                +CP+CR  F     +PD   DP+ WF L D D  G+++K E++ AL  + PVE   L E IE NW  WD DN+G++  TEF +      E  L N     T  L       PDL   P EWF  WD + +GSLER EIVRA+++T        P++    +      F  IW+ +     G +T  EF  P G+ + +  N+
Sbjct:  140 LSLAERYNECAVCYFELYRL-----------PVGILRSQS--KRACSHYFHTECIKRLVAKNAHEARNAGHAAVRECPICRAKFSDIKTLPDVFKDPRAWFQLCDIDCGGSLDKEEVLGALGAVLPVERDKLAEAIEENWVVWDPDNDGSITLTEFVEPRRGLREYLLRNFNVIKTENLNIRPDDIPDLDSHPLEWFNFWDGNGNGSLERSEIVRAIVRTFCVSPSGEPSFKRAFDLREMALF--IWDSLGYHEFGELTFEEFNAPFGVGDQIYHNY 401
[Close]
BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A7J6LDZ5_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LDZ5_PEROL)

HSP 1 Score: 125 bits (315), Expect = 3.610e-29
Identity = 87/263 (33.08%), Postives = 130/263 (49.43%), Query Frame = 1 
Query:  220 AAGYGECSVCFEHLCTK---GASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIP---HKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAP--FLEQSLGNMRHRMTVQL-------PDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAWLTG--TFQAIWNLIDPDGDGFITGAEFMMPG-GLYETLLAN 954
            A  + EC+VC++ L  K      V+T  +G            RRVC H+   +C   ++    + CP+CR  +   L +PD   DP+ WF  VD + +G ++K E++  LK   P+    LE+  +  +RRWDA  +G +   ++R+ + P   +     N R R T  L       P L++  A WF++WDED +G L++ E+ RALIKT        E   T      A+W+  D DGDG I   EF   G GL +T LAN
Sbjct:   10 AEEHAECAVCYDALPGKVNAPVCVLTGPDG------------RRVCPHYFHVDCVNYMLSSGQNLCPLCRTPYRGYLPIPDIDQDPKAWFRAVDLNGDGKLDKQEVMFVLKSTLPINYQRLEKDFDKLFRRWDASGDGYI---QYRELMGPGGLVNFVRSNFR-RNTKDLAGAVGAMPSLRNDKAGWFKYWDEDGNGVLDKEEVTRALIKTFRWQRDSLEQNSTARMVIDALWSDFDTDGDGTIDSREFCRSGSGLADTFLAN 256
[Close]
BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Match: A0A7J6LQN2_PERCH (RING-type domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LQN2_PERCH)

HSP 1 Score: 131 bits (329), Expect = 1.520e-28
Identity = 85/275 (30.91%), Postives = 126/275 (45.82%), Query Frame = 1 
Query:  211 LEIAAGYGECSVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIP--------------HKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGMFPVEPGALEEVIEMNWRRWDADNNGTLDSTEF---RDRLAPFLEQSLGNMR----HRMTVQLPDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAW-----LTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANF 957
            L IA  + ECSVC+  L                G+ R ++  RR C H+   EC   ++                +CP+C   F     +PD   DP+ WF L D D  GT+++ E++ AL  + PV    L   IE NW  WD DN+G +  TEF   R  L  +L ++  N++    +     +PDL   P  WF  WD + +GSLER E+VRA+IKT     G + ++     +      IW+ +     G +T  EF  P G+ + +  NF
Sbjct:  142 LSIAERFNECSVCYFELFRL-----------PVGILRLQS--RRACPHYFHTECIKRLVAKNASDARAAGYPSAQECPICGARFSEIKTLPDVFKDPRAWFQLCDIDSGGTLDQEEVLGALGAVLPVARDKLAVAIEDNWEVWDPDNDGVITLTEFVEPRRGLRQYLLRNFNNIKSDSVNLRPSDIPDLDSHPMAWFDFWDGNRNGSLERSEVVRAIIKTFCLNPGGEPSFARAFDIRELAMDIWDSLGYHEFGELTFEEFNAPFGVGDQIYHNF 403
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig596.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L845_9PHAE6.510e-15883.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD8_ECTSI1.510e-5485.86RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FYD7_ECTSI2.470e-4681.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4H6Z1_9ALVE2.000e-4034.93Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A4S2X8_OSTLU5.710e-3731.02Uncharacterized protein n=2 Tax=Ostreococcus sp. '... [more]
A0A7J6M912_PEROL2.730e-3031.77RING-type domain-containing protein n=1 Tax=Perkin... [more]
A0A7J6MPS5_PERCH8.630e-3031.82Uncharacterized protein n=1 Tax=Perkinsus chesapea... [more]
A0A7J6NT57_PEROL2.060e-2931.41RING-type domain-containing protein n=1 Tax=Perkin... [more]
A0A7J6LDZ5_PEROL3.610e-2933.08Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
A0A7J6LQN2_PERCH1.520e-2830.91RING-type domain-containing protein n=1 Tax=Perkin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig596contigP-littoralis_Contig596:89122..96605 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog296587.XP_002502215.1
PFAMsEF-hand_5,zf-RING_2
Model size1602
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue6.75e-49
EggNOG OGs2BZS4@1|root,2S2K6@2759|Eukaryota
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-08_003650.1
Cds size885
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig596.28.1prot_P-littoralis_Contig596.28.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig596 89749..96515 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791226.080189-UTR-P-littoralis_Contig596:89121..897481680791226.080189-UTR-P-littoralis_Contig596:89121..89748Pylaiella littoralis U1_48UTRP-littoralis_Contig596 89122..89748 -
1680791226.1710794-UTR-P-littoralis_Contig596:96515..966051680791226.1710794-UTR-P-littoralis_Contig596:96515..96605Pylaiella littoralis U1_48UTRP-littoralis_Contig596 96516..96605 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791226.106452-CDS-P-littoralis_Contig596:89748..898311680791226.106452-CDS-P-littoralis_Contig596:89748..89831Pylaiella littoralis U1_48CDSP-littoralis_Contig596 89749..89831 -
1680791226.1199334-CDS-P-littoralis_Contig596:90885..910241680791226.1199334-CDS-P-littoralis_Contig596:90885..91024Pylaiella littoralis U1_48CDSP-littoralis_Contig596 90886..91024 -
1680791226.1326525-CDS-P-littoralis_Contig596:91325..914561680791226.1326525-CDS-P-littoralis_Contig596:91325..91456Pylaiella littoralis U1_48CDSP-littoralis_Contig596 91326..91456 -
1680791226.1421664-CDS-P-littoralis_Contig596:92221..923511680791226.1421664-CDS-P-littoralis_Contig596:92221..92351Pylaiella littoralis U1_48CDSP-littoralis_Contig596 92222..92351 -
1680791226.151262-CDS-P-littoralis_Contig596:92815..929381680791226.151262-CDS-P-littoralis_Contig596:92815..92938Pylaiella littoralis U1_48CDSP-littoralis_Contig596 92816..92938 -
1680791226.1601102-CDS-P-littoralis_Contig596:96236..965151680791226.1601102-CDS-P-littoralis_Contig596:96236..96515Pylaiella littoralis U1_48CDSP-littoralis_Contig596 96237..96515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig596.28.1

>prot_P-littoralis_Contig596.28.1 ID=prot_P-littoralis_Contig596.28.1|Name=mRNA_P-littoralis_Contig596.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=295bp
MCVASSAKIKNEIGSSAHKENKSRAIDPTRRTDIWMSTMDLEIAAGYGEC
SVCFEHLCTKGASVMTDGNGQQAGLFRRETLPRRVCRHFLCQECAPTIIP
HKCPVCRRDFVTTLDVPDPLADPQRWFHLVDCDQNGTIEKAELVDALKGM
FPVEPGALEEVIEMNWRRWDADNNGTLDSTEFRDRLAPFLEQSLGNMRHR
MTVQLPDLKDQPAEWFRHWDEDESGSLERREIVRALIKTIPAYSGRDEAW
LTGTFQAIWNLIDPDGDGFITGAEFMMPGGLYETLLANFNWEHR*
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mRNA from alignment at P-littoralis_Contig596:89122..96605-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig596.28.1 ID=mRNA_P-littoralis_Contig596.28.1|Name=mRNA_P-littoralis_Contig596.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7484bp|location=Sequence derived from alignment at P-littoralis_Contig596:89122..96605- (Pylaiella littoralis U1_48)
CTAGGGGCCCGTAAACAGACGGGGAGGGAGTAATTTTGACGCTATGGGGT
ATGACCATAGAATAGCGAAGAGTCATACCCCATAGATCTCATGTGTGTTG
CCTCCTCTGCAAAAATAAAAAATGAAATCGGATCGTCGGCGCACAAAGAG
AACAAGAGCAGGGCGATCGACCCAACACGACGGACAGACATCTGGATGTC
TACGATGGACCTGGAAATCGCCGCAGGTTACGGGGAGTGCAGCGTGTGCT
TCGAGCATCTTTGCACCAAGGGCGCCTCCGTGATGACGGACGGCAACGGA
CAACAGGCCGGTCTGTTTCGGCGCGAGACCCTGCCCAGGCGGGTGTGTCG
GCACTTCCTTTGTCAAGAGGTGAGACATGTGTAGGTGCCCAGCGGCAATG
ACTACTGCTGTTGCCATCGAAATGTGTCGGGTGCCTTCGTTTGTTGAGCA
GATGTATATGGTTCAGATGCACGACCAGTTTGTTTGCTGCTGCTGAATCA
TGCGAGATCATGGTACGAAGTACTTCGTACGAAGTATTTCTTTTTTACAC
CAAGTGTTTCTTCCGCGTTTGGAACTCTCCAACTTCAACGACCACAAGCA
GCGAGCGTCTTTTCTCCTTCAGGCATCCACGCGTGCAGCAGCACGAATTG
ACGCTAGTGTCCGGTCATGATCCACACGAGGGAAATATGAGAGAGAGCAT
GTTGACCAAGCGTTTCCACATCATTAAAGCTTCATACAGACAAAACCAAT
TCAAACAACCCGAGAGCGCAGTCAGCGGGACGATTCAGTACTGCACTTGC
CAAAAAGGAAACAGACCGATCCTCATATCGTTCCGCGAAAGAGAACATGA
AGCATGAAGCACCCTTTCCCCGTGTTCGGTGACGTTCTAACAACAACAAA
GCATGGATACCCTTTAGGAGAGCTGCAACGTCAAGATGTATGTATGATAT
CACTCTCTATGTTCGTTGCTAATCTCGCTGGATCCTCGTCTAGAGAGAGG
CGAACAAATCCATGTCTATAGTATCATATGTGTATCGCACTTCTTTATGT
CAGAAAAAAAAAAAACATGAAAAAGGCTCCTCGCGCATCATAACAGAAAA
AAAACGCTAGTTCTGTGCCATCAGTACCAGTACGTATGTACCGGTACTTC
GTACACAATGTGTATGACGCCACTTCACCGGAAGCAAAGGATAAAAGCCA
CCGGTACAGCAGCATACTTACTGCTGTAAAGACAGAGTACATCTTCAGCA
GCAGTTTCTCACCAGACTTTACAGGTTATTCATCAATAATGACCTGGCAC
CAGGTACCGGTCGCCCCGGTGGTTCAGTTGGTAACTAACGCAACCTTCTG
ACATGCACGCGTGAGTTCGAACCCCAGTGCAGAACGTAACACGATTGGGG
GCTTTTTCTCACGTTGCGCGTGAAAGTGGAAAGCGATCGATTCGTGAGTA
AACAAAATTCGATCGTACTATCGACGAGGGAAAGGGATTGCTGTCCCCTT
TATCGCGATAAAAGCTCAACCAAAAGGCAAGCACCGCAGAGGGAAATGAA
AAAAAAAAAAATCCTGTGTCGACTTCCCCCTGTGTGACCCCACTTGGGGC
GTCGACCTATCCGAAAGGTGCAGAGTGGCGTCCAATTAAAGGGATGATAG
CACACACAGGTACGAGTACAGTTTATGTGACTCTGTCAAATCACTCTGGG
TGGACTGCATGCATACGCTCCACTGCGCTGTCTGTAATGATGTACGTTCA
CGCTTGTGGAGGGAGAGTAGGAGCTGTGGCACTGGCGTCTCCTCCGGCTC
TTCCCCCTTCCGATACGAGCGTTTTGTTATGACTGGTGGTACTGCTGTAA
AGGAGGTGTGATACGAAACCAGCTCTATTGGAACATCATTTTAGTTCTGG
CGCCCTCGCGTGTCGTTCTGACTTATGATATGGTGCGATGCTATCGTACG
TATCTTTCCGCGAACCTTCCCCCTGCTCATGAGAGCGCAAGCATTTTGAT
ATTGTTAGAGCATTCGTCCCCAACTCAAGTGTGTTCGAAAGTACAGAGCT
CCCTCACCCAGCTGTGAGCCCCAGGTGCGTCGTTCCCGGGCGTATAGAGT
AGCATATCAGAACGAAAGAGCCACGTTTTACATTAAGTCGCCCCCCTTTG
GGAGCTGGGGTGCAAAATAGCTGTCTGTTGTTAGTGGGCGGCGCAATCTC
TTGCCGCTGAGAGATATCATACATGCAATTTCAACTTTATGTACACAGCA
GTACCGGGTATAAAAAACCATACACCACCCCAGGTGTACTGAATTGTGAG
AGAGCGCAGATTTCACCAAATACATGTGACGCAAGCGTAAGAGAAACGCA
GCAGGGTCACTTGTGGTGGTCCTCATTGGAAATGAAAAAAATGTGTCTTC
AAGATGCGAGGGCGCGTGCGTGTGCTTGTCTCGCGGGGATACAGATGTTG
TTACCCCCCCCCCCTGCCCCCCCCAAAAAACACTCGCTGCTTCGTCACGG
GAGTGCATCACATTATCCCCCCAAGCTCTGCTTTCGCGAACTCGGATCAG
TACAAAACTCACTGGAAGGCAAGACGAACTCATCGTTCGTACTTCTCTTT
GACGGTTGGGTGGTTTTTTTGGTACCCGAATAGTCGCGCTCGAAGGGCGA
CATGCGCTTGCGTTGTAGCTTGGTAGTTGTACATGTGACGCAAGCGTGAA
GCGGACGGCCCGTCCGTGCGTTGCAAATGCACAGCGGTATCATATCATAT
CACACCCCCGAATACTTGTACCGCTGTATCGTGCGATAAATCAATTTTTT
TGCCCTGTCGGTGGTATTGGCCGCGAGGCACTTCCTTTTGGCCGCGAGGC
AATTCCGAAGAGGCACCCTGACCTGCCCCCCCCCCCCCCCCCTGCTGTGT
GTCGTGGTTTGTTTCAAGACACCGATGTTTTGAATATTGTACTACTGCTG
CAGCTAAAAAGTGCGCCTTGCGCCAGCAAGTGTGTGATTGTTCATGTCAT
CGCGTCCGTGTCATCGCATAATCTTGTACTTGTACAACAGCAGTACTCCC
TTCCTTTCTCTGAGAGCTTTTTTTTTCAGCTCAACTTTCTTCACGTCCAC
CGCCGCGCGCGTCTGCCTCCTCTGTTGTTCCATTTTTTTACGTTGGCGTT
GGCGCCGCTGCAGCCGTCGTCGTCATCGCTGTTTTGATTGACACAGTTTA
TCACGCCGCTCTCCTTATAACAGAAATACCACAGCAGCGCCAGCATTTGT
CCCATCCACACACATTTTACATTTTACGGTTTCATGCAGGTTTCATACAT
ATCATACATATCATACTACGGTATCGGTGTGTGTGCACCCGCGCTTATAC
CATAGTACATGCACGCTGGTGCGGTACTTGCTTTCAGTCAAAGTGCGCTG
CTGTACTTTTTCGAGTGACTTTGTCAGGTGATGTTTTTACGGTTACATAC
ATACACAGACAGATACCATACAATATCAGTTGTTTGTGTACCCGTGCCAT
ACCTGAAGTACCACTACCAACTATGCTGCTGCTGCACAGACATTACTTAC
CAAGTGACTTATTTTCGCCATGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTCGACGAC
GTGACGGAATCCCGCAGTGCGCGCCAACGATCATCCCGCACAAGTGCCCT
GTGTGCAGGAGGGATTTCGTGACCACCTTGGACGTCCCCGATCCCCTGGC
GGACCCACAGCGATGGTTCCACCTGGTGGATTGCGACCAGGTGTGTGTGT
TTGTGGGGTGTGGGTGTTCGTGTAGGTGTAGGTGTGGATGTTTCTGCTAT
TTTTTCATCGTCACATTAATCGTGTGCACCGTTTTTTTTTATTTCCTTTT
CGCATGTGTGTACGATAAGGATGCATGTACATGTGTACCCTGTGCATCTA
GCGCCCACTCCCTCGCTGCCTTTTCATCCATCAGTCACTCATTGCCTTTG
GCCTTGTCAAGAGAGCTCTTGTGCTCTCGTTTTTTTTTTTTTTGAAGTGT
TCGGTAATATCAAATGAAATAATGTGTTTTTTTTTTTCCTACTTCGAAGT
ACAATTTTTCATCATCGGGCTTTATATGCTCTCCGTTCAAGCAACATATC
ATACTTCGAAGTACTGTACACACAGTAGTAGTTTTTTTTTTTCATGTATG
TAATCCACGCGATCTCGCACTTATTTTTTTGTTCTTGCGCCTTTAACGAA
ACAGAACGGAACCATCGAGAAGGCGGAGCTGGTGGACGCCCTCAAGGGTA
TGTTCCCCGTCGAGCCAGGAGCGCTGGAGGAGGTCATCGAGATGAACTGG
AGGCGTTGGGATGCCGACAACAATGGGACGCTGGGTACGTTGTGTTATCA
TACGCATGTGTTACACATGTGTTCCGTAGTAACACGAGGCGTGTTGCGGA
GCTTTGTGCACAGACACAGACAGACAGACAACGCTATAATATGGTGTGAT
GTGATATGACGTGATATGGTAAAGTATGGCATGTGAAACACACTCGCATG
CTGCCCGTATATGTATGATACATGTGAACGTGTTCATTCTTGCTGCAGCG
CGCGTAGAGCATCGGACAGATCCACCGGCCGCCGCCGCGTGCGTTCGTGC
GTTCGTGCCCGCGTGCGGACTAGTACCTTGGAAGGCTTCTGTCAAGGGTT
GGGTCGGATCGAACCTGCCATAGCCGCCGCCGCCGCCGCCGCCGCCGCTG
AATGTTTCTTTTGTTTTGATCGTCTGAGCGAGTTACACAGCTGGCTTTCC
GTTCGGACGCGGCCCGTGCCCCCTGAAGCACAGCACACTCGCTCCCGGTT
GACACACTTATTTATTTTTGTGCAACGCCTTTTTTTGTTCACCTGTTCCC
GTTTTTTGTTTTGTGTTTCTCCCGCACGCGTCTTGTTTTTTGCTCAAATG
ACTGGAACAAACAAACGACGCTTTTCCGTCAAAACCACGCAGGTATGATA
TGAATATGATGTGGTCATCCTCCTCACGACAAGAGATTTTATTCATTTAT
TTTTTTGTGCGACGCCTTGCTATGATCGCGCTTGCGGCGGCGGGCGGCGG
GTGGTGGTGGTGGTGGTGGTGGCGCGGGGGGGGTGGGTTACACGAACAGA
TTCGACCGAGTTTCGAGACCGCCTGGCGCCTTTCCTCGAGCAGTCGCTGG
GGAACATGAGGCACAGGATGACCGTACAACTGCCAGACCTGAAGGATCAA
CCGGCGGAGTGGTTCAGACACTGGGATGAGGTGAGTCGGGAAAGGTCGAC
CACCAGCCGGTCGTTTGTCTTCTTTTTTCTCGTTTTTTTATTTATCCCCC
TCCCCTTGCACGTGGACTCTCGTTTTGTGGATGGACCCTTTACGGCGAGG
GATCTTTCGTTTCAATCCGAAAAGTTGTGGAAGCTGCTGCTGTTGCTGCC
GCCGTTGCCGTTGCCGTTGCTGTTGCTATTGCTCTTTCGGTGTTCGACCA
TCCTTCCACGTACTGCTAGCTGTGTCATGCAAAACAAGCACACACACACA
CACACACACACACATTTTTGTTCATTCCCAGGACGAGTCTGGATCCCTGG
AGCGGCGGGAGATCGTGCGCGCCCTGATCAAGACCATTCCCGCGTACTCG
GGGAGGGATGAGGCGTGGCTGACGGGGACGTTCCAAGCGATCTGGAACTT
GATCGACCCGGATGGGGACGGTGAGATTGAGAAAATAGTTCGTACGGTAT
GAGACAACATGGATGAAGATTCTGAAGGGGGTGCGGGGGTTCCGCGAAAG
ATACCGCAGCGGCAGCCTCGTACTGTGACAGTAATGTTGTGATTCCCTGT
ATTGCTCCGGGGGTAGCGTAATGTAACTCGTGAAACCTTTTAATCCACAT
CGCGAAGTGGGTGTGGTACAGCAATACAGCAGTCGAAACGGGTTCCATGA
TCCTTTCTCGCCAACAACGGCTGTCGAATCGAAATACTGCGATGCTATGT
TACTTCTTGTATGACACTTTTCGAAGTACATGCTTTGTCGTTGCGTACAA
AATCCTCGAGTAGGTGTTCTAAAACCGGCTGTCGAATTGAGATACTGCTA
TGCTATTATTTTACTCCTTGTATGAGGCACGCTTTGTTGTTGCGTATGGT
ATAATATCCTCCAAGTAGGCCTTCCTCGCGTCGAAGACGCAGCAGATCTT
AACAAAAAGCACACCCATACCCGGAAAACCAGCCTCCTTCACCTGTCCAA
CGACACACACATATTGCTGTAGACAGGAGATGGATGCACGTACGCGGCGA
ACTGAAGGGCACCTGTGGGTCTTCTCCAAACTCATGAGGGTCGTGTACAC
TGCTGTTATGATTAATTATGGTGGCAACGTTTACCATTTGAAAACATTCT
CGTGATCACACATCAAATCCCCCCCCCCGATAGGTGTACCGTGACTATTC
TCGACCCCCCCCCTTCATGGAAAACAATGGGAAACTTATGCACCACCACG
TGTGAGAGCTTTAACCCACCTGGGCTATAAACCTGCCGCAGTGCAGCAGC
AGTACGATGGTTTCTCATGTCTCTCAACCCATACCCCCTTCGAAATAGGT
ACTTATTTACATGTGTGAATGTGAGGTACAGTAGTCATGGGCCTTTGCTC
GCGGAGCCTCATTTGATATCGTGTTCATGCACTGCCAACTCCCCCGCCCT
CCTCCGCCCGCCCTCCTCCGCCCGCCCCCGCCTCGCCCCCCCCTCCCCCG
ATTTTTTTTGTCAAAACTCGAAAGGGTTTATTACGGGAGCGGAGTTCATG
ATGCCCGGAGGCTTGTACGAGACTCTCCTCGCTAACTTTAACTGGGAACA
CCGTTGATTTTGACACGAGTTATCATACGCCGTCGTGGGCAATGGAAATG
GAAAGGGGCAAGGGCTGGATGGATGGACGGACACGGGGTTGGGGGGGGGG
AAGGACACAAGCGCAGGCCACATACCTACCATCAGCCTCGAATGGGAGGC
ATTTTTCGAGAGCACGCACGATGGGTGGATATTTTTCCGAGCAAGATTAT
CTCCGTGGGCGTGTAAAAGTATATCACATCTACGTGTGCGTAAAAAATAT
TGTTTTGATGTTTTATAGTTTTCCTTCTTTTGTTTTTGTTTCAAGCGTGT
GGTATGATGTGCTATTTAATCATGGCTCGACGGCAGGAGTTATGGTATGG
TGCTGCTGTTGTATTCCTGTCCTTCTTTTGTACAAATTTATTGAATTGCT
TGTTTCTTGCGGGACAGGACGGGACGGGACGGGTTTGATGTCTGTGCAAC
ACCACAACAGAAACAACAAACAATGCCGTCGTAGAAAAAACGCGCTATCC
GTATCATCATAAAAAAGCTTTTGAGAATAGAAAGTCAGGAGAAAGCTTAC
AAAAAAAATGCCAAGAAGGGGCTCGAGGGGAGAGGGAATAATTTCGACAG
GAGGGTGTTGTGAAGTCCTCGCTGTGTACTTACT
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Coding sequence (CDS) from alignment at P-littoralis_Contig596:89122..96605-

>mRNA_P-littoralis_Contig596.28.1 ID=mRNA_P-littoralis_Contig596.28.1|Name=mRNA_P-littoralis_Contig596.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=885bp|location=Sequence derived from alignment at P-littoralis_Contig596:89122..96605- (Pylaiella littoralis U1_48)
ATGTGTGTTGCCTCCTCTGCAAAAATAAAAAATGAAATCGGATCGTCGGC
GCACAAAGAGAACAAGAGCAGGGCGATCGACCCAACACGACGGACAGACA
TCTGGATGTCTACGATGGACCTGGAAATCGCCGCAGGTTACGGGGAGTGC
AGCGTGTGCTTCGAGCATCTTTGCACCAAGGGCGCCTCCGTGATGACGGA
CGGCAACGGACAACAGGCCGGTCTGTTTCGGCGCGAGACCCTGCCCAGGC
GGGTGTGTCGGCACTTCCTTTGTCAAGAGTGCGCGCCAACGATCATCCCG
CACAAGTGCCCTGTGTGCAGGAGGGATTTCGTGACCACCTTGGACGTCCC
CGATCCCCTGGCGGACCCACAGCGATGGTTCCACCTGGTGGATTGCGACC
AGAACGGAACCATCGAGAAGGCGGAGCTGGTGGACGCCCTCAAGGGTATG
TTCCCCGTCGAGCCAGGAGCGCTGGAGGAGGTCATCGAGATGAACTGGAG
GCGTTGGGATGCCGACAACAATGGGACGCTGGATTCGACCGAGTTTCGAG
ACCGCCTGGCGCCTTTCCTCGAGCAGTCGCTGGGGAACATGAGGCACAGG
ATGACCGTACAACTGCCAGACCTGAAGGATCAACCGGCGGAGTGGTTCAG
ACACTGGGATGAGGACGAGTCTGGATCCCTGGAGCGGCGGGAGATCGTGC
GCGCCCTGATCAAGACCATTCCCGCGTACTCGGGGAGGGATGAGGCGTGG
CTGACGGGGACGTTCCAAGCGATCTGGAACTTGATCGACCCGGATGGGGA
CGGGTTTATTACGGGAGCGGAGTTCATGATGCCCGGAGGCTTGTACGAGA
CTCTCCTCGCTAACTTTAACTGGGAACACCGTTGA
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