mRNA_P-littoralis_Contig1154.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1154.1.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE) HSP 1 Score: 297 bits (760), Expect = 1.380e-95 Identity = 141/161 (87.58%), Postives = 147/161 (91.30%), Query Frame = 1
Query: 1 ANQVGSAPSDGAAAKKRKPIPGQLNPVRARAFCFGFGADGVGLSQKLHDKFAGEYGLRDGPITEGGCKIPNFSEAGVTKGESTWQLDEHDDLILPVHNSNKTEGHPRCTLGGCVPVEKVNESWRLCHWALKYILNRRIVPKVTQNKRHNGSGEKSRAKGRK 483
ANQVGSAPS+GAAAK RKPIPGQ NPV+ FCFGFGADGVGL QKLHDKFAGE G DGPITEGGC+IPNFSEAGVTKGESTWQLDEHD LILPVH+ NKTEGHP CT+GGCVPVEKVNESWRLCHWALKYILNRRIV KVTQN RHNG+GEKSRAKGRK
Sbjct: 438 ANQVGSAPSNGAAAKVRKPIPGQRNPVKEYGFCFGFGADGVGLDQKLHDKFAGENGFGDGPITEGGCEIPNFSEAGVTKGESTWQLDEHDYLILPVHSGNKTEGHPACTIGGCVPVEKVNESWRLCHWALKYILNRRIVSKVTQNARHNGAGEKSRAKGRK 598
BLAST of mRNA_P-littoralis_Contig1154.1.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.210e-92 Identity = 136/161 (84.47%), Postives = 148/161 (91.93%), Query Frame = 1
Query: 1 ANQVGSAPSDGAAAKKRKPIPGQLNPVRARAFCFGFGADGVGLSQKLHDKFAGEYGLRDGPITEGGCKIPNFSEAGVTKGESTWQLDEHDDLILPVHNSNKTEGHPRCTLGGCVPVEKVNESWRLCHWALKYILNRRIVPKVTQNKRHNGSGEKSRAKGRK 483
ANQVGSAPSDGAAAK RKPIPGQLNPVRA FCFGFGADGVGL QKLHDKFAG+ G DGPITEGGC+IPNFSEAGVTKG+STWQLDEHD+LILPVH+S +TEGHPRC LGGCVPVEKVNESWRLCHWALKYIL RRIV +++Q++RHNG+ KSRAKGRK
Sbjct: 393 ANQVGSAPSDGAAAKMRKPIPGQLNPVRAHGFCFGFGADGVGLPQKLHDKFAGKNGFGDGPITEGGCEIPNFSEAGVTKGKSTWQLDEHDNLILPVHSSIETEGHPRCQLGGCVPVEKVNESWRLCHWALKYILARRIVQRISQSQRHNGAPAKSRAKGRK 553
BLAST of mRNA_P-littoralis_Contig1154.1.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE) HSP 1 Score: 263 bits (671), Expect = 9.430e-85 Identity = 123/161 (76.40%), Postives = 139/161 (86.34%), Query Frame = 1
Query: 1 ANQVGSAPSDGAAAKKRKPIPGQLNPVRARAFCFGFGADGVGLSQKLHDKFAGEYGLRDGPITEGGCKIPNFSEAGVTKGESTWQLDEHDDLILPVHNSNKTEGHPRCTLGGCVPVEKVNESWRLCHWALKYILNRRIVPKVTQNKRHNGSGEKSRAKGRK 483
ANQVGSAPSDGAAAK RKPIPGQLNPV+A FCFG GA GVGL+QKL+DKFA E+G +GPITEGGC+ PNFSEAGVT+G+S W+ DEHD LILPVH+ +T+GHPR +GGCV VEKVNESWRLCHW LKYIL RRIVPK+TQN+RHNG+ EKS AK RK
Sbjct: 224 ANQVGSAPSDGAAAKMRKPIPGQLNPVKAHGFCFGLGAGGVGLAQKLYDKFASEHGFEEGPITEGGCETPNFSEAGVTEGKSKWEHDEHDKLILPVHSGIRTDGHPRYVIGGCVSVEKVNESWRLCHWVLKYILARRIVPKITQNQRHNGAPEKSYAKRRK 384
BLAST of mRNA_P-littoralis_Contig1154.1.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.100e-54 Identity = 96/159 (60.38%), Postives = 110/159 (69.18%), Query Frame = 1
Query: 10 VGSAPSDGAAAKKRKPIPGQLNPVRARAFCFGFGADGVGLSQKLHDKFAGEYGLRDGPITEGGCKIPNFSEAGVTKGES-TWQLDEHDDLILPVHNSNKTEG-HPRCTLGGCVPVEKVNESWRLCHWALKYILNRRIVPKVTQNKRHNGSGEKSRAKGR 480
VG APS+GAAA+ RK IP NP +AR FCFG GADGVGL++KL FAGE G GPIT GC P F EAGVTK + +WQLDE LILP HN+N G HP C +GG VPVEKVN SWRLC WAL Y+ R+V K+T N RHN + +KSR K R
Sbjct: 393 VGGAPSNGAAARLRKHIPDPPNPAKARGFCFGIGADGVGLAEKLKQLFAGENGFGKGPITTKGCHTPKFGEAGVTKSDRFSWQLDEDGCLILPPHNTNNPGGKHPTCQIGGTVPVEKVNGSWRLCSWALPYVSTGRVVQKITHNARHNNAPQKSRGKKR 551
BLAST of mRNA_P-littoralis_Contig1154.1.1 vs. uniprot
Match: D7FLR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR6_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.410e-51 Identity = 92/162 (56.79%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 ANQVGSAPSDGAAAKKRKPIPGQLNPVRARAFCFGFGADGVGLSQKLHDKFAGEYGLRDGPITEGGCKIPNFSEAGVTKGES-TWQLDEHDDLILPVHNSNKTEG-HPRCTLGGCVPVEKVNESWRLCHWALKYILNRRIVPKVTQNKRHNGSGEKSRAKGR 480
ANQVGSAP++ AAA R+ IPG +P RA FCFG GADG GL+ KL FAGE G GPIT GC P F EAGVT + +W LD+HD+LILPVHNSN G HPRC +GG V VE+V SWRLC WA +Y+ R+V ++T N+RHNG+ +K K R
Sbjct: 495 ANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTNSDRFSWTLDDHDNLILPVHNSNSYGGKHPRCQIGGVVLVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKR 656 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1154.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1154.1.1 >prot_P-littoralis_Contig1154.1.1 ID=prot_P-littoralis_Contig1154.1.1|Name=mRNA_P-littoralis_Contig1154.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=163bp ANQVGSAPSDGAAAKKRKPIPGQLNPVRARAFCFGFGADGVGLSQKLHDKback to top mRNA from alignment at P-littoralis_Contig1154:11004..11496+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1154.1.1 ID=mRNA_P-littoralis_Contig1154.1.1|Name=mRNA_P-littoralis_Contig1154.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=493bp|location=Sequence derived from alignment at P-littoralis_Contig1154:11004..11496+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1154:11004..11496+ >mRNA_P-littoralis_Contig1154.1.1 ID=mRNA_P-littoralis_Contig1154.1.1|Name=mRNA_P-littoralis_Contig1154.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=489bp|location=Sequence derived from alignment at P-littoralis_Contig1154:11004..11496+ (Pylaiella littoralis U1_48)back to top |