mRNA_P-littoralis_Contig595.7.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: D7FPS9_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPS9_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 1.700e-183 Identity = 281/343 (81.92%), Postives = 300/343 (87.46%), Query Frame = 3
Query: 108 MSSKAGKKKKNKGSRWGGAMPTQQVAAASGRGGIIATEADQARKNSRNAARFAEHLGXXXXXXXXXXXXKKRSRWAMDNGSDGSSTGPVRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEKDVEAVFAAPGAGEEAAIDIKATRAAWAR 1136
MSSK GKKK +K +RWG A + AAA GRGGI+ E D+ARK RNAARFAEHLG KKRSRWAM NGS +ST PVRG+S SLEKSYFRLTSAPKPSDVRPP +L RSLRHVKRKWA EEDYEF CDQLKAIRQDLTVQA+ED LTVDVYQTHGRIALESGDMEEYNQCQSRLKELHL+GVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAR+GEGVAHALGVVK+YHMGDYCTFFRLYFAAP+MSSYLMD+LVMRMRRRA KTMVKAYLPTIPL FIQEQL+FD+R SLLEF++KDVEA AAP AGEEAAID+KATRAAWAR
Sbjct: 1 MSSKPGKKK-SKATRWGKAAKAKPAAAAGGRGGIVGMETDEARK-IRNAARFAEHLGGGSNSKQQGSG-KKRSRWAMGNGSGSNSTDPVRGSSSSLEKSYFRLTSAPKPSDVRPPEILTRSLRHVKRKWATEEDYEFVCDQLKAIRQDLTVQAIEDGLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLSGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEARQGEGVAHALGVVKSYHMGDYCTFFRLYFAAPAMSSYLMDFLVMRMRRRAIKTMVKAYLPTIPLSFIQEQLRFDSRDSLLEFIDKDVEAALAAPKAGEEAAIDVKATRAAWAR 340
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A162NBM1_PHYB8 (PCI domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162NBM1_PHYB8) HSP 1 Score: 215 bits (547), Expect = 6.920e-62 Identity = 110/225 (48.89%), Postives = 154/225 (68.44%), Query Frame = 3
Query: 372 VRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFL 1046
+ GTS+ LEK Y RLTSAP PS VRP +L+++L +K KW AE++Y + CDQ K++RQDLTVQ + D+ TV VY+ H RIALE GD+ EYNQCQS+LK+L++ G+PG M EFT YR++Y L+ +N ++N+ M +++ E + E V HAL V +Y FFRLY +AP+M YLMD + R R +A + KA P +PL FIQ +L F++ L++FL
Sbjct: 8 IIGTSVKLEKQYLRLTSAPDPSTVRPLPILKQTLELLKDKWKAEQNYTYICDQFKSMRQDLTVQRIRDEFTVQVYEIHARIALEKGDLGEYNQCQSQLKQLYMLGIPGNVM-EFTAYRILYFLHTQNWSDINSIMAEVTPEQKRDEAVQHALQVRSCLATSNYHRFFRLYTSAPNMGGYLMDQFIERERVQALIILCKACRPDLPLSFIQTELAFEDHEQLIKFL 231
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: R7UTY3_CAPTE (PCI domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UTY3_CAPTE) HSP 1 Score: 225 bits (574), Expect = 9.200e-62 Identity = 115/237 (48.52%), Postives = 163/237 (68.78%), Query Frame = 3
Query: 336 MDNGSDGSSTGPVRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFL 1046
+D+ D + + GTS SLEK YFRLTSAP PS VRP VL++SL VK W A++DY + C+QLK+IRQDLTVQAV D TV+VY+ H RIA+E GD EE+NQCQ++LK L+ G +++EF YR++Y ++ +N ++ M L+ EAR+ GV HAL + A+ +G+YC FFRLY +AP M YL+D+ R R+ A K ++KA+ P++ L ++Q++L F + LLEFL
Sbjct: 386 LDDDMDWNDGCNIVGTSSSLEKQYFRLTSAPDPSTVRPVEVLRKSLLMVKHHWKAKQDYAYVCEQLKSIRQDLTVQAVRDAFTVNVYEVHARIAMEKGDHEEFNQCQTQLKLLYQEGCNSDNINEFAAYRILYYIFTKNTLDLTTVMASLNYEARQDAGVKHALRLRSAWALGNYCLFFRLYLSAPKMGGYLIDWFASRERKAAIKRIIKAFKPSMTLDYLQKELGFSSAKDLLEFL 622
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A023G7Z9_AMBTT (Putative leucine permease transcriptional regulator (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=A0A023G7Z9_AMBTT) HSP 1 Score: 216 bits (549), Expect = 1.670e-60 Identity = 120/253 (47.43%), Postives = 160/253 (63.24%), Query Frame = 3
Query: 369 PVRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEKDVEAVFAAPGAGEEAAIDIKATRAA 1127
P+ GT LEK Y RLTSAP PS +RP VL+ SL VK W ++DY +ACDQLK+IRQDLTVQ V + TV VY+TH R+ALE GD EE+NQCQ++LK L+ G + EF GYR++Y+++ N E+ + LS E + E V HAL V A+ +G+Y FF+LY P MS +LMD+ V+R RR A K MVKAY P +P+ +I+ L F +R +L FL ++ AA GA + + A AA
Sbjct: 156 PIVGTCQDLEKQYLRLTSAPDPSTIRPVAVLRESLDMVKEHWVQKQDYHYACDQLKSIRQDLTVQCVRNPFTVQVYETHARVALEKGDHEEFNQCQTQLKTLYQEVECGNPL-EFLGYRILYNVFARNTLELKTILAHLSAEEKRDEVVKHALAVCHAWSLGNYARFFKLYERPPKMSGFLMDWFVVRERRNALKAMVKAYRPVLPVGYIERALGFTDREDVLAFLT-ELNVTLAADGASVDCKESLAAVLAA 406
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A1B6M2U9_9HEMI (PCI domain-containing protein (Fragment) n=2 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6M2U9_9HEMI) HSP 1 Score: 211 bits (536), Expect = 2.210e-60 Identity = 111/227 (48.90%), Postives = 155/227 (68.28%), Query Frame = 3
Query: 372 VRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEK 1052
V G LEK Y RLT+AP+ + VRPP VL++SL VK +W +DY +AC+QLK+IRQDLTVQ V D LTV VY+TH RIALE GD E+NQCQS+LK L+ +P + EFT YR++Y ++ + + ++N M L+++ R E V+HAL V A+ +G+Y F+LY AAP MSSYLMD+ + R R+ A KT+VKAY T+P+ F+ ++L F + +FL +
Sbjct: 13 VVGVCQDLEKPYLRLTAAPEANAVRPPDVLRQSLSRVKERWVLNQDYHYACEQLKSIRQDLTVQGVRDKLTVSVYETHARIALEKGDHAEFNQCQSQLKLLY-EDLPTENQQEFTAYRILYYIFTKENMDLNTVMTALTEDDRGDECVSHALNVRSAWSLGNYHRLFKLYRAAPRMSSYLMDWFLPRERKLALKTVVKAYRQTLPVSFLTQELAFQTDVVCRQFLSQ 238
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A8H7S054_9FUNG (PCI domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S054_9FUNG) HSP 1 Score: 221 bits (562), Expect = 5.750e-60 Identity = 116/233 (49.79%), Postives = 159/233 (68.24%), Query Frame = 3
Query: 372 VRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEKDVEAVF 1070
+ GTS LEK+YFRLTSAP PS VRPP VL+++L +K KW E++Y + CDQ K++RQDLTVQ + D+ TV VY+ H RIALE GD+ EYNQCQS+LK+L+ G+ G M EFT YR++Y L+ +N ++N+ M +L+ E ++ + V HAL V A +Y FF+LY +AP M YLMD V R R RA + KAY PT+ L FIQ +L F+ + LL+FL+ ++F
Sbjct: 397 IIGTSQMLEKNYFRLTSAPDPSTVRPPKVLKKTLELLKTKWRDEQNYTYICDQFKSMRQDLTVQRIRDEFTVTVYEIHARIALEKGDLGEYNQCQSQLKQLYAMGINGNVM-EFTAYRILYYLHTQNWSDINSIMFELTAEQKQNDLVKHALQVRSALSTSNYHRFFKLYVSAPQMGGYLMDQFVERERVRAMLILCKAYRPTMSLEFIQNELAFERQEDLLKFLKSHDASIF 628
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A1X2HA78_SYNRA (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HA78_SYNRA) HSP 1 Score: 214 bits (545), Expect = 3.300e-59 Identity = 111/227 (48.90%), Postives = 154/227 (67.84%), Query Frame = 3
Query: 372 VRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEK 1052
+ GT LEK+Y RLTSAP PS VRP VL+ +L +K KW++E +Y + CDQ K++RQDLTVQ + DD TV VY+ H RIALE GD+ EYNQCQ++LKEL+ G+ G S EF YR++Y L+ +N ++NA M++L++E R+ + V HAL V A +Y FF+LY AAP+M +LMD + R R RA + KA+ PT+P+ FIQ +L F + +FL+K
Sbjct: 211 IVGTCTQLEKNYLRLTSAPDPSTVRPLHVLKETLELLKEKWSSESNYTYICDQFKSMRQDLTVQRIRDDFTVRVYEIHARIALEKGDLGEYNQCQTQLKELYALGIQGQST-EFAAYRILYFLHTQNWSDINACMVELTEEQRQSDEVQHALQVRSALATSNYHRFFKLYHAAPNMGGFLMDQFIERERVRALIILCKAFRPTLPIAFIQPELDFVTEEEISKFLKK 436
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: G7DSI1_MIXOS (PCI domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7DSI1_MIXOS) HSP 1 Score: 213 bits (541), Expect = 5.190e-59 Identity = 110/233 (47.21%), Postives = 151/233 (64.81%), Query Frame = 3
Query: 372 VRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEKDVEAVF 1070
+ GTS LEK Y RLT+ P P+ +RP VL+R+L +K KW +E++Y + CDQ K++RQDLTVQ +++D TV VY+ H RIALE GD+ EYNQCQS+L+EL+ G+ G + EF YRL+Y L+ N E+ + + DLS+ R EG+ HAL V A +YC+FF+LY AP M Y+MD+ R R +A TM KAY ++PL F+ QL FD ++FL A F
Sbjct: 160 IVGTSTQLEKPYLRLTTVPNPATIRPLPVLRRTLEMLKTKWRSEQNYNYVCDQFKSLRQDLTVQRIKNDFTVTVYEIHARIALEKGDLGEYNQCQSQLRELYKHGLVGHQL-EFVAYRLLYLLHTRNRSELTSVLADLSEVERADEGIRHALQVRSALATSNYCSFFKLYLVAPKMGGYMMDHFAPRERLQALLTMTKAY-KSVPLTFLVSQLAFDTESETVQFLNSHQAAHF 390
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A443SJM2_9ACAR (Leukocyte receptor cluster member 8-like isoform X2 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SJM2_9ACAR) HSP 1 Score: 207 bits (528), Expect = 8.810e-59 Identity = 110/234 (47.01%), Postives = 153/234 (65.38%), Query Frame = 3
Query: 351 DGSSTGPVRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEEDYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHREVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFLEK 1052
D S P+ GT LEK Y RLTSAP P+ VRP VL++SL VK W DY +ACDQLK+IRQDLTVQ V + TV+VY+TH RIALE GD EE+NQCQS+L+ L+ V V+ EFTGY ++Y+++ +NH + + ++ E + HAL V + + + +Y TFF+LY AP MS +++D+ V R R+ A K M+KAY PT+PL F++++L F N +FL +
Sbjct: 43 DLKSATPIVGTCEDLEKQYLRLTSAPDPATVRPVHVLRKSLESVKDHWIRNHDYYYACDQLKSIRQDLTVQFVRNSFTVEVYETHARIALEKGDREEFNQCQSQLQVLYNE-VDSVNKAEFTGYLILYTIFSDNHSGLQLLLSKINNSKLNDEVINHALTVRRCWSLKNYSTFFKLYLKAPKMSGFVIDWFVNRERKYALKAMLKAYRPTLPLQFLKDELAFANNDEFQQFLSQ 275
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Match: A0A7S3YM12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YM12_HETAK) HSP 1 Score: 206 bits (524), Expect = 1.750e-58 Identity = 115/233 (49.36%), Postives = 155/233 (66.52%), Query Frame = 3
Query: 372 VRGTSISLEKSYFRLTSAPKPSDVRPPVVLQRSLRHVKRKWAAEE-DYEFACDQLKAIRQDLTVQAVEDDLTVDVYQTHGRIALESGDMEEYNQCQSRLKELHLAGVPGVSMDEFTGYRLIYSLYRENHR-------EVNATMMDLSQEAREGEGVAHALGVVKAYHMGDYCTFFRLYFAAPSMSSYLMDYLVMRMRRRAFKTMVKAYLPTIPLIFIQEQLKFDNRLSLLEFL 1046
V+GT ++LEK YFRLTSAP PS VRPP VL+ ++ +K+ W +E DYE+ CDQLKA+RQD TVQ + D L VDVY+TH RIALE GD+ EYNQCQ++LKEL+ +G PG M EFT YR++Y + ++++ E+ + L R VAHAL V +A DY FF+LY AP+MS+Y+MD ++ ++R +A + +VKAY PTI FIQ L FD+ E L
Sbjct: 3 VKGTCVNLEKRYFRLTSAPDPSTVRPPPVLEEAMLRLKKLWKDQEKDYEYVCDQLKAVRQDCTVQQIRDGLAVDVYETHARIALEEGDLNEYNQCQTQLKELYASGAPGHEM-EFTAYRVLYYVNMQDNQKNQDGSTEMLKMLKALRPAQRADPAVAHALRVRQAMAEDDYHLFFQLYEDAPNMSAYIMDLMLDKIRVKALQRVVKAYKPTIATDFIQRILAFDSEDECFELL 234 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig595.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig595.7.2 >prot_P-littoralis_Contig595.7.2 ID=prot_P-littoralis_Contig595.7.2|Name=mRNA_P-littoralis_Contig595.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp MSSKAGKKKKNKGSRWGGAMPTQQVAAASGRGGIIATEADQARKNSRNAAback to top mRNA from alignment at P-littoralis_Contig595:51800..60900- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig595.7.2 ID=mRNA_P-littoralis_Contig595.7.2|Name=mRNA_P-littoralis_Contig595.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9101bp|location=Sequence derived from alignment at P-littoralis_Contig595:51800..60900- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig595:51800..60900- >mRNA_P-littoralis_Contig595.7.2 ID=mRNA_P-littoralis_Contig595.7.2|Name=mRNA_P-littoralis_Contig595.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig595:51800..60900- (Pylaiella littoralis U1_48)back to top |