prot_P-littoralis_Contig1153.18.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1153.18.2
Unique Nameprot_P-littoralis_Contig1153.18.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: D7G9H3_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9H3_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 2.210e-87
Identity = 165/230 (71.74%), Postives = 183/230 (79.57%), Query Frame = 0
Query:    3 GDDFYTGAEEVPATEGAPEGGGYNDIGSGEYGNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGFDSGMGFQQDNMGYANLDEPSGGSGGNGME------NMPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQDTSRMTSILIQLKNEPLDSASTAAAS 226
            GDDF+TGAE+ P  +     GGYND+GSGEYG  G    XXXXXXXX                 GFD+GMGFQQDNMGYA LD+PSGGS             MPAPEDVEPSALDEFMERWQAGL EKA IEAEAKAAALEAAKADLE+H++ERA+NKEAKMGQNREQEQ+FLEQLEGELESENPWERVVSLVDTQ+EVVE+F+DTSRMTSILIQLKN+P+D++STAAAS
Sbjct:    4 GDDFFTGAEDAPEQQQ----GGYNDLGSGEYGATGGDYGXXXXXXXXFDQQPNGEVAQAN--GTGFDNGMGFQQDNMGYATLDDPSGGSXXXXXXXXMPDMGMPAPEDVEPSALDEFMERWQAGLVEKARIEAEAKAAALEAAKADLETHSVERAANKEAKMGQNREQEQIFLEQLEGELESENPWERVVSLVDTQSEVVEDFKDTSRMTSILIQLKNDPIDTSSTAAAS 227          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A835YIR5_9STRA (Clathrin light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR5_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.330e-32
Identity = 77/149 (51.68%), Postives = 96/149 (64.43%), Query Frame = 0
Query:   75 QQDNMGYANLD------EPSGGSGGNGMENMPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQDTSRMTSILIQLKNEPL 217
            QQD   Y +LD         G +G    + MPAPE+V  +AL  FM  W+A L EKA  E  AK  AL+AA+ D +    ER   KE +M  NR QEQVFLEQLE +LESENPWER+VSLVDTQ E    F+DTSR+ +++IQLKN+P+
Sbjct:   52 QQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPI 200          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A7S3Y6V3_HETAK (Clathrin light chain n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6V3_HETAK)

HSP 1 Score: 106 bits (264), Expect = 3.160e-24
Identity = 70/151 (46.36%), Postives = 96/151 (63.58%), Query Frame = 0
Query:   74 FQQDNMGYANLDEPSGGSGGNGMENMPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQDTSRMTSILIQLKNEPLDSASTAA 224
            F  +++GY+NLD      GG  M  M     +  +ALD+FM++W+  L EK  +E +A   A + AKA+L+    ++    EAKM +NR +EQV LEQLE +LES+NPWER+ +LVD Q E   +  D SRM SILIQLKNEPL+  + AA
Sbjct:  117 FGGEDVGYSNLDATQDMMGGAQM--MMGEPHMMRTALDDFMDKWEQELREKRAVEEQAAEEAKQKAKAELDHFYAQKEKTFEAKMSKNRSEEQVLLEQLEADLESDNPWERITNLVDLQAEG--DDVDKSRMRSILIQLKNEPLEVKAGAA 263          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A7S2UWZ8_9STRA (Clathrin light chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.890e-18
Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   90 GSGGNGMENMPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQDTSRMTSILIQLKNEPLDSASTAAA 225
            GSG  G + +  PE V  +ALD+F E+W+  L EKA +E +     ++ AK +L+    E+   +E++  +NR+ EQ  LE+LE +LE EN WERV SLVD   +  E+  D SRM +++ QLK EPL  A T+ A
Sbjct:   79 GSGVGGDDPLEIPEPVARTALDDFEEQWKEKLAEKAELERQTTQETIQKAKQNLDKFYDEKRVQRESRQSKNRQLEQSMLEKLEADLECENAWERVSSLVDLTLDGGEDAPDQSRMVALITQLKREPLAPALTSEA 214          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A7S2FSU6_9STRA (Clathrin light chain n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSU6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.140e-14
Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   99 MPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESEN--PWERVVSLVDTQTEVVEEFQDTSRMTSILIQLKNE 215
            +P P D + + L+ F E W+A L  KA  E   +   +EAAKA++     ++   +E+K  QNR++EQV LE +E E++ EN  PWERVV LV+ + E  E   D SRM SI +Q+KN+
Sbjct:   26 LPEP-DTDNAKLNAFNETWEATLAAKAAEEETTRQTMIEAAKAEMAEWEKQQEVQRESKTSQNRQEEQVVLEDIEREMDPENGNPWERVVKLVEIKAEAGEGELDVSRMKSIFLQMKNK 143          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A7R9Y9Z6_9STRA (Clathrin light chain n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Z6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.730e-13
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   91 SGGNGMENMPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQDTSRMTSILIQLKNEPLD 218
            +G   + +M  PE  E +ALD+FME+W+  L EK  +E   +  A+ AA   L+ H  +    ++ +   NR  EQV LEQLE E  + NPW+RVV L+D  T       +TSRM S++IQ+KN+PL+
Sbjct:   17 TGAEAVTSMEIPE--ERTALDDFMEKWEQELAEKRAVEESKRQEAVAAAAKALDEHKKQADIARQKRYETNRNSEQVKLEQLESE-GTGNPWDRVVGLIDV-TSQDSSVANTSRMKSVIIQVKNKPLE 140          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A2D4BVD7_PYTIN (Clathrin light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVD7_PYTIN)

HSP 1 Score: 75.9 bits (185), Expect = 5.090e-13
Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   96 MENMPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQ-------------------------TEVVEEFQDTSRMTSILIQLKNEPLDSASTAA 224
            M +MPA E  E + L +FM +++A + +KA  + +      E AK D++    ER+  KE+K   NR QEQ  LE+L  +LESENPWERVVSLVD +                         +   E+ +D SRM  + +QLK EPLD    AA
Sbjct:   88 MASMPAVE--EDNELTKFMRQYEAEIAQKAQEQEKVGVECKEKAKKDMDQFQTERSRKKESKQQANRVQEQATLEKLAADLESENPWERVVSLVDLEVNRKQKLAALNNKKDAKNKEPEPVKSSKKEDEEDLSRMRQLFVQLKAEPLDKTRAAA 239          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A8K1CW16_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW16_PYTOL)

HSP 1 Score: 69.3 bits (168), Expect = 1.190e-10
Identity = 54/151 (35.76%), Postives = 74/151 (49.01%), Query Frame = 0
Query:   99 MPAPEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTE-------------------------VVEEFQDTSRMTSILIQLKNEPLDSASTAA 224
            M  P   E + L +FM +++  +  KA  + +      E AK D+E    ER+  KE+K   NR QEQ  LE+L  +LESENPWERVVSLVD +T                            EE +D SRM  + +QLK +PL+    A+
Sbjct:   81 MSVPVIEEENELTKFMRKYEGEIAAKAQEQEKVGVECKEKAKHDMEQFTAERSRIKESKQQSNRVQEQATLEKLALDLESENPWERVVSLVDLETNRKQKLAALNAKKDGKNKEAEAPKPVKKEEEEDVSRMRQLFVQLKADPLEKTRAAS 231          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: K3X3M0_GLOUD (Clathrin light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3M0_GLOUD)

HSP 1 Score: 67.0 bits (162), Expect = 1.470e-9
Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 0
Query:  106 EPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQT--------------------------EVVEEFQDTSRMTSILIQLKNEPLD 218
            E + L +FM  ++  + EKA  + +    + E A+ D+E    ER+  KE+K   NR  EQ  LE+L  +LESENPWERVVSLV+ +                           +  EE +D SRM  + +QLK EPLD
Sbjct:  147 EENELTKFMREYEQRIAEKAVEQEKVAVESKEKAQQDMEKFVAERSRIKESKQQANRVHEQATLEKLAADLESENPWERVVSLVELEANRKQKLAALNAKKDAKNKEADAPKAAKKDEEEEDVSRMRQLFVQLKAEPLD 285          
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Match: A0A2R5G7Q9_9STRA (Clathrin light chain n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7Q9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.670e-9
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0
Query:  104 DVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIERASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQ----DTSRMTSILIQLKNEP 216
            D + +AL  F  +W+A L+EK       ++   E A+ +LE    E+A   +++   NREQE+ FLE +   L +ENPWER++SLVD       + +    D +R+  I +QLKN+P
Sbjct:  118 DADDAALRAFQRKWEAELSEKDAKMETQRSEMKERAQQELEKFKAEKADALKSRQKTNREQEEHFLEDINEALTAENPWERILSLVDISKSSGAKGEGGERDLARLRKIFVQLKNDP 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1153.18.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H3_ECTSI2.210e-8771.74Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YIR5_9STRA4.330e-3251.68Clathrin light chain n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3Y6V3_HETAK3.160e-2446.36Clathrin light chain n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UWZ8_9STRA5.890e-1841.91Clathrin light chain n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FSU6_9STRA4.140e-1442.02Clathrin light chain n=1 Tax=Florenciella parvula ... [more]
A0A7R9Y9Z6_9STRA4.730e-1340.63Clathrin light chain n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2D4BVD7_PYTIN5.090e-1337.66Clathrin light chain n=1 Tax=Pythium insidiosum Ta... [more]
A0A8K1CW16_PYTOL1.190e-1035.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X3M0_GLOUD1.470e-935.97Clathrin light chain n=1 Tax=Globisporangium ultim... [more]
A0A2R5G7Q9_9STRA5.670e-935.90Clathrin light chain n=1 Tax=Hondaea fermentalgian... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000996Clathrin light chainPFAMPF01086Clathrin_lg_chcoord: 95..216
e-value: 5.4E-19
score: 69.1
IPR000996Clathrin light chainPANTHERPTHR10639CLATHRIN LIGHT CHAINcoord: 54..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
NoneNo IPR availablePANTHERPTHR10639:SF7CLATHRIN LIGHT CHAINcoord: 54..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1153contigP-littoralis_Contig1153:44851..57944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1153.18.2mRNA_P-littoralis_Contig1153.18.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1153 44042..58546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1153.18.2 ID=prot_P-littoralis_Contig1153.18.2|Name=mRNA_P-littoralis_Contig1153.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MDGDDFYTGAEEVPATEGAPEGGGYNDIGSGEYGNNGGDYGGADFSNGGG
GFDQQANGDVQQANSNGFDSGMGFQQDNMGYANLDEPSGGSGGNGMENMP
APEDVEPSALDEFMERWQAGLNEKAGIEAEAKAAALEAAKADLESHAIER
ASNKEAKMGQNREQEQVFLEQLEGELESENPWERVVSLVDTQTEVVEEFQ
DTSRMTSILIQLKNEPLDSASTAAAS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000996Clathrin_L-chain