prot_P-littoralis_Contig1153.1.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1153.1.4
Unique Nameprot_P-littoralis_Contig1153.1.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length165
Homology
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BLAST of mRNA_P-littoralis_Contig1153.1.4 vs. uniprot
Match: A0A6H5K145_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K145_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.050e-49
Identity = 94/142 (66.20%), Postives = 98/142 (69.01%), Query Frame = 0 
Query:   23 ASTVSYADGALQGAAGKGIKALHGQIMGVVSTQMWGEFDGAVLFALWFRRLLVSALLPLNKTSSRSAAYHEHAAPRETESGTGDLEMILMGMDTGTLGVARLTTGHLICVYAEAWVQMGSVRTRLLSLRSALEISLRSLEGG 164
            A+ +  ADGALQGAAGKGI ALHGQIMGVVST MWGEFDGA                                   E ESGTGDL+MILMGMDTGTLGVARL TGHL+CVYAE WVQMGSVRTRLLSLRSALEISLRSLE G
Sbjct:   21 ATMLLQADGALQGAAGKGITALHGQIMGVVSTAMWGEFDGA-----------------------------------EMESGTGDLDMILMGMDTGTLGVARLRTGHLVCVYAEDWVQMGSVRTRLLSLRSALEISLRSLEEG 127
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BLAST of mRNA_P-littoralis_Contig1153.1.4 vs. uniprot
Match: D7G9H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H2_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 3.260e-31
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 0 
Query:  101 ESGTGDLEMILMGMDTGTLGVARLTTGHLICVYAEAWVQMGSVRTRLLSLRSALEISLRSLEGG 164
            ESGTGDL+MILMGMDTGTLGVARL TGHL+CVYAE WVQ+GSVRTRLLSLRSALEISLRSLE G
Sbjct:    2 ESGTGDLDMILMGMDTGTLGVARLRTGHLVCVYAEDWVQLGSVRTRLLSLRSALEISLRSLEEG 65
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1153.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K145_9PHAE3.050e-4966.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9H2_ECTSI3.260e-3190.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.30Dynein light chain 2a, cytoplasmiccoord: 14..162
e-value: 3.9E-8
score: 35.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1153contigP-littoralis_Contig1153:5738..21849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1153.1.4mRNA_P-littoralis_Contig1153.1.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1153 5623..22852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1153.1.4 ID=prot_P-littoralis_Contig1153.1.4|Name=mRNA_P-littoralis_Contig1153.1.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp
MGTMKQNDIVASFRVEAVLHVAASTVSYADGALQGAAGKGIKALHGQIMG
VVSTQMWGEFDGAVLFALWFRRLLVSALLPLNKTSSRSAAYHEHAAPRET
ESGTGDLEMILMGMDTGTLGVARLTTGHLICVYAEAWVQMGSVRTRLLSL
RSALEISLRSLEGG*
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