mRNA_P-littoralis_Contig59.74.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: D7G5K3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K3_ECTSI) HSP 1 Score: 194 bits (492), Expect = 3.210e-60 Identity = 93/105 (88.57%), Postives = 97/105 (92.38%), Query Frame = 2
Query: 257 PRLASSAPLQMVESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDEVR 571
P + +QMVESEVKEEF+KHMA TLDWGALCKAA+EVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEG LVCPETGRRFPIAEGVPNLMCTEDEVR
Sbjct: 21 PLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEVR 125
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: A0A836CHT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT2_9STRA) HSP 1 Score: 121 bits (304), Expect = 9.880e-32 Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 2
Query: 257 PRLASSAPLQMVESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDE 565
P ++ +QM ES + +F+KH+A TL+W AL +A +VG+PE LP A++ LL D +FL ALHRVLMD+HVV GALVCPE+GRRFPIA G+P++M E E
Sbjct: 21 PLSIEASEVQMEESPFRPDFVKHIAPTLNWPALRQAVKQVGLPEDMLPEAVSDALLGDEAFLRALHRVLMDVHVVAGALVCPESGRRFPIAHGIPDMMIAEGE 123
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: A0A2P6VL84_9CHLO (Multifunctional methyltransferase subunit TRM112 At1g22270 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL84_9CHLO) HSP 1 Score: 102 bits (253), Expect = 3.540e-24 Identity = 44/95 (46.32%), Postives = 72/95 (75.79%), Query Frame = 2
Query: 281 LQMVESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDE 565
+++ E++ + +F++H+ + W ALC+AA+ +G+ EG LP T E+LED +F++ H L+++H+ EGALVCPETGR+FP++ G+PNL+ TEDE
Sbjct: 29 VEVQEADFEPDFLQHIFPRIQWAALCEAAAAMGV-EG-LPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLLLTEDE 121
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: B5Y448_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y448_PHATC) HSP 1 Score: 102 bits (253), Expect = 4.690e-24 Identity = 43/84 (51.19%), Postives = 65/84 (77.38%), Query Frame = 2
Query: 314 FIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDE 565
F++ + +TLDW AL +AAS++G+P +LPP LT +L ED FLEALH VLM++H+++G L CP TGR FP+ +G+PN++ E++
Sbjct: 45 FVEGLLSTLDWSALIEAASQLGIP--TLPPVLTEDLAEDPEFLEALHHVLMNVHLIQGILTCPATGREFPVRDGIPNMVLEEED 126
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: A9S9D3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9D3_PHYPA) HSP 1 Score: 100 bits (249), Expect = 1.400e-23 Identity = 44/96 (45.83%), Postives = 66/96 (68.75%), Query Frame = 2
Query: 281 LQMVESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDEV 568
L+ ESE+ +F++H+ LDW A +AA VG+ ++P + P +L+D FL H L+++H+ EGAL+CPETGRRFP+ +GVPN++ EDEV
Sbjct: 29 LETKESELNADFLRHIFPKLDWKAFHEAAQSVGV--NNIPDQVEPVMLDDDEFLRKFHHALLEVHLEEGALICPETGRRFPVTKGVPNMLLNEDEV 122
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: A0A210QVU1_MIZYE (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QVU1_MIZYE) HSP 1 Score: 100 bits (250), Expect = 1.550e-23 Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 2
Query: 278 PLQMVESEVK-------EEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDEV 568
PL++V ++V+ EFI M +DW ALC+AA VG EG LP ALT + ED L+ +H VLM + V+EG LVCPETGR+FPI+ G+PN++ EDEV
Sbjct: 36 PLKIVPTQVEVKTVDFNPEFISRMLPKIDWPALCQAAQSVGHGEG-LPEALTEKYEEDEMLLKKVHHVLMQVEVLEGNLVCPETGRQFPISSGIPNMLLNEDEV 138
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: A0A1Y1INK2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INK2_KLENI) HSP 1 Score: 100 bits (248), Expect = 1.970e-23 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 2
Query: 293 ESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDEV 568
E++ F++H+ LDW AL +AA+ +G+ E LP + P LED FL H VL+++H+ EGALVCPETGRRFP+++G+PN++ EDEV
Sbjct: 33 ETDFNAGFLRHIYPKLDWKALREAAASLGLEE--LPEQVEPSQLEDEDFLRRFHHVLLEIHLEEGALVCPETGRRFPVSKGIPNMLLNEDEV 122
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: I0Z8N2_COCSC (Trm112p-domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z8N2_COCSC) HSP 1 Score: 97.8 bits (242), Expect = 1.550e-22 Identity = 42/95 (44.21%), Postives = 68/95 (71.58%), Query Frame = 2
Query: 281 LQMVESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDE 565
++ V+++ +F++H+ L+W ALC+AA+ +G P LP ++ E+L+D FL + H L+++ + EGALVCPETGR+FP+ +GVPNL+ EDE
Sbjct: 29 VEQVDADYDPDFLRHIYPRLEWKALCEAAATMGAP--GLPEEVSEEMLQDDDFLRSFHHALLELVLEEGALVCPETGRQFPVHKGVPNLLLNEDE 121
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: UPI0006B0D279 (multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0D279) HSP 1 Score: 97.8 bits (242), Expect = 1.640e-22 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 2
Query: 278 PLQMVESEVKE-------EFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDEV 568
PL++ +EVKE EF+ M LDW ALC+AA +G LP ++ P D FL+ H VL+++ V+EG LVCPETGR+FP+ EG+PN++ EDEV
Sbjct: 22 PLKICATEVKEVAVDFNPEFVTRMIPKLDWDALCQAAESLGCLN-DLPRSVNPNHENDEEFLKKAHHVLLEVEVIEGELVCPETGRKFPVNEGIPNMLLNEDEV 124
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Match: A0A0G4GWP5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWP5_VITBC) HSP 1 Score: 97.8 bits (242), Expect = 1.880e-22 Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 2
Query: 293 ESEVKEEFIKHMANTLDWGALCKAASEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGALVCPETGRRFPIAEGVPNLMCTEDEV 568
ESE + EFI+H+ LDW AL K A E+ + G +PP+ + E +D +FL A+H V+MD+H++EG LVCP R +P+++G+PN++ T DEV
Sbjct: 39 ESEFRPEFIQHLLPKLDWEALYKTAQELNLSPG-VPPSYSEEDKKDENFLRAVHDVVMDVHILEGKLVCPNCNREYPVSKGIPNMLLTNDEV 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig59.74.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig59.74.4 >prot_P-littoralis_Contig59.74.4 ID=prot_P-littoralis_Contig59.74.4|Name=mRNA_P-littoralis_Contig59.74.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=142bp MWRPREKSRRNLMKWCCCYDITEYIAKAALFAFLCPPRLASSAPLQMVESback to top mRNA from alignment at P-littoralis_Contig59:435210..437472+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig59.74.4 ID=mRNA_P-littoralis_Contig59.74.4|Name=mRNA_P-littoralis_Contig59.74.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=2263bp|location=Sequence derived from alignment at P-littoralis_Contig59:435210..437472+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig59:435210..437472+ >mRNA_P-littoralis_Contig59.74.4 ID=mRNA_P-littoralis_Contig59.74.4|Name=mRNA_P-littoralis_Contig59.74.4|organism=Pylaiella littoralis U1_48|type=CDS|length=426bp|location=Sequence derived from alignment at P-littoralis_Contig59:435210..437472+ (Pylaiella littoralis U1_48)back to top |