mRNA_P-littoralis_Contig59.72.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 606 bits (1563), Expect = 9.880e-212 Identity = 281/289 (97.23%), Postives = 284/289 (98.27%), Query Frame = 2
Query: 128 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 994
LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVW KFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPK+S CACQIHTQQGLYLK EMLMPAMH+NCDCTCK CDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGG+FEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC
Sbjct: 14 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYLKV-EMLMPAMHSNCDCTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 301
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 613 bits (1580), Expect = 3.660e-210 Identity = 280/289 (96.89%), Postives = 285/289 (98.62%), Query Frame = 2
Query: 128 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 994
LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVW KFLKWPEYLGLKAELLRED+SFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPA+HANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRF DQVMEDGKVHKKQQ+PQ GKL DLW+EFVEHSKKY+HHHELAKWQRQAHNMC
Sbjct: 279 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMC 567
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5KI39_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI39_9PHAE) HSP 1 Score: 580 bits (1496), Expect = 2.600e-206 Identity = 270/295 (91.53%), Postives = 280/295 (94.92%), Query Frame = 2
Query: 128 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMCEISDFA 1012
LEKGRYLWAPRKER+DKMDERVM LARRFWHSDDISRASGDSGT+A+WRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRT+FLSTRCGCLVEPKVSQCACQIHTQQGLY KAFEMLMPA+HANC+CTC WCDG SGCGKWMAMCKDLHSFSEALACEK FL E RGGRFEHWGRKPACVAMEC E GFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQ+PQAGKL DLW E VEHSKKY+HHHELAKWQRQAHNMC ++ FA
Sbjct: 14 LEKGRYLWAPRKERTDKMDERVMDLARRFWHSDDISRASGDSGTEAVWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTMFLSTRCGCLVEPKVSQCACQIHTQQGLYHKAFEMLMPAIHANCECTCNWCDG-SGCGKWMAMCKDLHSFSEALACEKAGFLAEGRGGRFEHWGRKPACVAMECPEYGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQLPQAGKLGDLWDEVVEHSKKYMHHHELAKWQRQAHNMC-LATFA 306
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 613 bits (1580), Expect = 4.560e-203 Identity = 280/289 (96.89%), Postives = 285/289 (98.62%), Query Frame = 2
Query: 128 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 994
LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVW KFLKWPEYLGLKAELLRED+SFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPA+HANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRF DQVMEDGKVHKKQQ+PQ GKL DLW+EFVEHSKKY+HHHELAKWQRQAHNMC
Sbjct: 903 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMC 1191
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE) HSP 1 Score: 484 bits (1247), Expect = 6.610e-165 Identity = 232/279 (83.15%), Postives = 234/279 (83.87%), Query Frame = 2
Query: 266 MWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCG-----------------------------------CL-VEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 994
MWRPSKKAGEEY PRRQLMVAGDQ WRKFLKWPEYLGLKAELLRED+SFTDPGRTLFLSTRCG C+ VEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEAL CEKVD LEEDRGGRFEHWG KPACVAMECSEC FGNP IPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKL DLWKEFVEHSKKYIHHHELAKWQRQAHNMC
Sbjct: 1 MWRPSKKAGEEYQPRRQLMVAGDQAWRKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGDRSSVMDSSAVSPPQEDGLFADPLSSFLSVSTVRLCVTVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALDCEKVDCLEEDRGGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLGDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 279
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE) HSP 1 Score: 434 bits (1115), Expect = 5.870e-144 Identity = 200/225 (88.89%), Postives = 206/225 (91.56%), Query Frame = 2
Query: 320 MVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 994
MVAGDQVW KFLKWPEY+GLKAELLREDSSFTDPGRTLFLSTRCGC VEPKVS+CACQ HTQQG+ LKAFEMLMPA HANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRF DQVMEDGKVHKKQQ+PQ GKL DLW+EFVEHSKK RQAHN+C
Sbjct: 1 MVAGDQVWHKFLKWPEYMGLKAELLREDSSFTDPGRTLFLSTRCGCSVEPKVSKCACQTHTQQGIDLKAFEMLMPATHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKK-----------RQAHNIC 214
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5JE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE40_9PHAE) HSP 1 Score: 377 bits (968), Expect = 6.370e-128 Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 2
Query: 128 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALA 655
LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCK LHSFSEALA
Sbjct: 14 LEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKYLHSFSEALA 189
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 395 bits (1016), Expect = 3.640e-125 Identity = 189/296 (63.85%), Postives = 219/296 (73.99%), Query Frame = 2
Query: 134 KGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMCEISDFATLR 1021
+G Y++ RK RSD + VM LAR FWHSDD+SRA+G+SG K M++ SKK HPRRQLM GD VWR FL+ YL LK+ LL +DS+FTDPGRT FLSTRCGCLV+P SQCACQIHTQQ LYL+A LM ++H +CDC C WCD GC +W MC+DL FS+ALACEKV+ LE D G FE WGRKPAC AM+CSECGFG PGGIP NC A+ +RVV W+RFEDQ M DGKVHKKQQ+PQ GKL+DLW EF+ HS Y+ HH LAKWQRQAH MC ATLR
Sbjct: 270 EGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDD-LGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHS--YMEHHALAKWQRQAHKMC----MATLR 557
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 372 bits (955), Expect = 8.550e-121 Identity = 174/272 (63.97%), Postives = 203/272 (74.63%), Query Frame = 2
Query: 134 KGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIH 949
+G Y++ RK RSD + VM LAR FWHSDD+SRA+G+SG K M++ SKK HPRRQLM GD VWR FL+ YL LK+ LL +DS+FTDPGRT FLSTRCGCLV+P SQCACQIHTQQ LYL+A LM ++H +CDC C WCD GC +W MC+DL FS+ALACEKV+ LE D G FE WGRKPAC AM+CSECGFG PGGIP NC A+ +RVV W+RFEDQ M DGKVHKKQQ+PQ GKL+DLW EF+ HS K IH
Sbjct: 270 EGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDD-LGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSVKAIH 539
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Match: A0A6H5L4W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W3_9PHAE) HSP 1 Score: 337 bits (864), Expect = 1.320e-112 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 2
Query: 533 MLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 994
MLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPM CDAL SMADRVVGWLRFE+QVMEDGKVHKKQQ+PQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC
Sbjct: 1 MLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMKCDALESMADRVVGWLRFENQVMEDGKVHKKQQVPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMC 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig59.72.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig59.72.2 >prot_P-littoralis_Contig59.72.2 ID=prot_P-littoralis_Contig59.72.2|Name=mRNA_P-littoralis_Contig59.72.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=313bp MDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAback to top mRNA from alignment at P-littoralis_Contig59:429640..431482- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig59.72.2 ID=mRNA_P-littoralis_Contig59.72.2|Name=mRNA_P-littoralis_Contig59.72.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1843bp|location=Sequence derived from alignment at P-littoralis_Contig59:429640..431482- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig59:429640..431482- >mRNA_P-littoralis_Contig59.72.2 ID=mRNA_P-littoralis_Contig59.72.2|Name=mRNA_P-littoralis_Contig59.72.2|organism=Pylaiella littoralis U1_48|type=CDS|length=939bp|location=Sequence derived from alignment at P-littoralis_Contig59:429640..431482- (Pylaiella littoralis U1_48)back to top |