prot_P-littoralis_Contig1150.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1150.5.1
Unique Nameprot_P-littoralis_Contig1150.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length130
Homology
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BLAST of mRNA_P-littoralis_Contig1150.5.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 2.820e-23
Identity = 66/118 (55.93%), Postives = 77/118 (65.25%), Query Frame = 0 
Query:    1 MRLNIKGMLRQRHAADEEMVRRAEEA-----RANAAAGRGGAFSDDEGEIINAACDEDDAEGSNVMPPTRNAHNVLAYVNNATDNCIRAGFSKSNDARLPAGALLSGRSAEQAATDAN 113
            MR+NIKGMLRQRHAADEE   RA        R       GGA  D +G+I  A  D+ D  G NVMPP RNAH V AYVNNA D C+ AGFS++++ RLP  ALLSGRS+ Q A DA+
Sbjct:  550 MRINIKGMLRQRHAADEE--NRASSVLQSLRRRRPLGACGGA--DIDGDIFGADVDDTDPAGPNVMPPARNAHRVSAYVNNAVDRCLDAGFSRTDNDRLPQAALLSGRSSHQIAADAS 663
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1150.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT57_9PHAE2.820e-2355.93ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1150contigP-littoralis_Contig1150:20602..20991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1150.5.1mRNA_P-littoralis_Contig1150.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1150 20586..20991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1150.5.1 ID=prot_P-littoralis_Contig1150.5.1|Name=mRNA_P-littoralis_Contig1150.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=130bp
MRLNIKGMLRQRHAADEEMVRRAEEARANAAAGRGGAFSDDEGEIINAAC
DEDDAEGSNVMPPTRNAHNVLAYVNNATDNCIRAGFSKSNDARLPAGALL
SGRSAEQAATDANSVNIGVSAADAKSSLKT
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