prot_P-littoralis_Contig115.128.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.128.1
Unique Nameprot_P-littoralis_Contig115.128.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length253
Homology
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BLAST of mRNA_P-littoralis_Contig115.128.1 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.890e-101
Identity = 166/218 (76.15%), Postives = 169/218 (77.52%), Query Frame = 0 
Query:    1 MDIDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCTAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVK--------DEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTSKGGTPVSDIL 210
            MD+DTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYP GF+PGREGSDGAKLPVYMFLQQG LEEGVQEH TA VHA VARWWSS ADSNEDRAFTGN TSTGKILA+VVK        DEDLA YYGLKKSFSG                            WAEEY ADGSWKFKTSKGGTPVS  L
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTSTGKILASVVKADLYIPRQDEDLAFYYGLKKSFSG----------------------------WAEEYSADGSWKFKTSKGGTPVSVSL 211
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BLAST of mRNA_P-littoralis_Contig115.128.1 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 5.440e-56
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0 
Query:    1 MDIDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCT 101
            MD+DTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYPRGF+PGREGSDGAKLPVYMFLQQG LEEGVQEH T
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122
[Close]
BLAST of mRNA_P-littoralis_Contig115.128.1 vs. uniprot
Match: A0A6H5K994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K994_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 7.340e-15
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:  140 KDEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFC--LPAGWAEEYGADGSWKFKTSKGGTPVSDILE 211
            +DEDLA YYGL+K  S + T WVLSRSSL  ERA+A  SF   LPAGW EE+G D SW FK +  GTPV+  +E
Sbjct:   63 RDEDLAQYYGLRK-VSSKPTKWVLSRSSLGEERAEAHISFGFGLPAGWCEEFGPDHSWTFKKTHDGTPVAISVE 135
[Close]
BLAST of mRNA_P-littoralis_Contig115.128.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 7.700e-7
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:  208 DILEMRFAHTRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNS 253
            DILE RFAH R+G G HK PTA QA +A   GDT R+ HG RRRNS
Sbjct:  576 DILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNS 621
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KRI1_9PHAE1.890e-10176.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1G6_9PHAE5.440e-5694.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K994_9PHAE7.340e-1559.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z3_9PHAE7.700e-765.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:530642..532022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.128.1mRNA_P-littoralis_Contig115.128.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 530638..532022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.128.1 ID=prot_P-littoralis_Contig115.128.1|Name=mRNA_P-littoralis_Contig115.128.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp
MDIDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDA
QQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHC
TAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVKDEDLACYYGL
KKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTS
KGGTPVSDILEMRFAHTRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERR
RNS
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