mRNA_P-littoralis_Contig115.118.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: D7FPM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM0_ECTSI) HSP 1 Score: 289 bits (739), Expect = 2.220e-98 Identity = 146/153 (95.42%), Postives = 151/153 (98.69%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTI+NRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVI+IAR MR RSMAR+LAGTVKEMLGTCNSVGCTVNGQSPRDIQSGI+EGE+VIPDE
Sbjct: 13 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 165
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A835YTI9_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI9_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.310e-88 Identity = 130/152 (85.53%), Postives = 145/152 (95.39%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPD 456
V+LRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQK+T +WKGLPITVKLTIVNRQATVSVIP+ASSLILKALNEPERDRKKVK++KHDGNVTLDQ+ID+AR MR+RSMAR+LAGTVKE+LGT SVGCTVNG +PRD+Q IT+GE+VIPD
Sbjct: 14 VVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKSTMDWKGLPITVKLTIVNRQATVSVIPSASSLILKALNEPERDRKKVKHVKHDGNVTLDQIIDVARVMRARSMARTLAGTVKEVLGTAFSVGCTVNGMAPRDVQKAITDGEIVIPD 165
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A7S2UAZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAZ7_9STRA) HSP 1 Score: 248 bits (634), Expect = 2.170e-82 Identity = 117/153 (76.47%), Postives = 142/153 (92.81%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
VI+R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKG+ +TVKLT+VNRQATV++IPAASSLI+KALNEP RDRKKVKN+ H+GN+TL+QVIDIA+ MR RSMAR L+GTVKE+LGTCNS+GCTVNG+SPRDIQ+GI +GEVVIPDE
Sbjct: 12 VIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGMNVTVKLTVVNRQATVTMIPAASSLIMKALNEPVRDRKKVKNVVHNGNITLEQVIDIAKVMRERSMARKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVVIPDE 164
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: B8BTS3_THAPS (RL12, ribosomal protein 11 60S large ribosomal subunit n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8BTS3_THAPS) HSP 1 Score: 244 bits (622), Expect = 1.460e-80 Identity = 116/153 (75.82%), Postives = 140/153 (91.50%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
VI+R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT+VNRQATVS+IP+ASSL++KALNEP RDRKKVKN+ H+GN+TLDQVIDIAR MR RSMA+ LAGTVKE+LGT NS+GCTVNG+SPRDIQ+GI +GEV IP+E
Sbjct: 12 VIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVVHNGNITLDQVIDIARQMRERSMAKKLAGTVKEILGTANSIGCTVNGESPRDIQAGIDDGEVEIPEE 164
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A7S2XYN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYN5_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.540e-79 Identity = 120/148 (81.08%), Postives = 136/148 (91.89%), Query Frame = 1
Query: 13 AIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPD 456
A+GGE+ A+LAPK+GPLGLSPKKIGEDIQK T +WKGL ITVKLTIVNRQATV+V+P+ASSL++KALNEP RDRKKVKNIKHDGN+TLDQVID+ARTMRSRSMAR L+GTVKEMLGT S+GCTVNGQSPRDIQ I+EGE+VIPD
Sbjct: 55 AVGGEMAAAASLAPKIGPLGLSPKKIGEDIQKATMDWKGLGITVKLTIVNRQATVTVVPSASSLLVKALNEPPRDRKKVKNIKHDGNLTLDQVIDVARTMRSRSMARHLSGTVKEMLGTAFSLGCTVNGQSPRDIQKAISEGEIVIPD 202
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A7S1E7R7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7R7_9STRA) HSP 1 Score: 240 bits (613), Expect = 5.670e-79 Identity = 112/152 (73.68%), Postives = 138/152 (90.79%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPD 456
VI+R +GGE+G+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT+VNRQATVS+IP+ASSL++KALNEP RDRKKVKN+KHDGN+ LDQ+I+IAR MR RSMA+ LAGTVKE+LGTCNS+GCTVNG+SPRD+Q I +GEV IP+
Sbjct: 27 VIMRTVGGEIGSASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVKHDGNIALDQIIEIARQMRERSMAKKLAGTVKEILGTCNSIGCTVNGESPRDLQQMIDDGEVEIPE 178
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: K0TFA0_THAOC (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=K0TFA0_THAOC) HSP 1 Score: 238 bits (608), Expect = 1.980e-78 Identity = 114/153 (74.51%), Postives = 139/153 (90.85%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
VI+R +GGEV +ALAPK+GPLGLSPKK+GEDI K T++WKGL +TVKLT+VNRQA+VS+IP++SSLI+KALNEP RDRKKVKNI H+GN+TLDQVIDIA+ MR RSMA+ L+GTVKE+LGTCNS+GCTVNG+SPRDIQ+GI +GEV IP+E
Sbjct: 12 VIMRTVGGEVAPASALAPKIGPLGLSPKKVGEDIMKATKDWKGLNVTVKLTVVNRQASVSMIPSSSSLIMKALNEPYRDRKKVKNIVHNGNLTLDQVIDIAKQMRERSMAKKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVEIPEE 164
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A7S3PV60_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV60_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.820e-78 Identity = 112/153 (73.20%), Postives = 137/153 (89.54%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
VI+R +GGEV ++LAPK+GPLGLSPKK+GEDIQK T++WKGL +TVKLT+VNRQATV++IP++SSLI+KALNEP RDRKKVKN+ HDGN+TLDQVI+IAR MR RS A+ L+GTVKEMLGTCNS+GCTVNG SPRD+Q+GI +GE+ IP E
Sbjct: 12 VIMRTVGGEVAAASSLAPKIGPLGLSPKKVGEDIQKATKDWKGLSVTVKLTVVNRQATVTMIPSSSSLIMKALNEPVRDRKKVKNVTHDGNLTLDQVIEIARAMRDRSCAKELSGTVKEMLGTCNSIGCTVNGDSPRDVQAGIDDGEIEIPAE 164
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A7S1BV82_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV82_9STRA) HSP 1 Score: 238 bits (606), Expect = 4.000e-78 Identity = 114/153 (74.51%), Postives = 137/153 (89.54%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
VI+R +GGEVG ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT+VNRQATVS+IP+ASSL++KALNEP RDRKK KNI H+GN+TLDQVIDIAR MR RSMA+ L+GTVKE+LGT NS+GCTVNG++PRD+QS I +GEV IPDE
Sbjct: 12 VIMRTVGGEVGAASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKEKNIVHNGNITLDQVIDIARQMRERSMAKELSGTVKEILGTANSIGCTVNGENPRDVQSAIDDGEVEIPDE 164
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Match: A0A7S1XKH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKH5_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.120e-77 Identity = 112/153 (73.20%), Postives = 138/153 (90.20%), Query Frame = 1
Query: 1 VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIVNRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIDIARTMRSRSMARSLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGITEGEVVIPDE 459
V++RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+K T +WKGL +TVKL +VNRQATVSVIP+ASSL++KALNEP RDRKKVK++ HDGN+TLDQVID+AR MR RSMAR L+GTVKE+LGTC S+GC+VNG++PR +Q IT+GE+ IP+E
Sbjct: 41 VVMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKKATMDWKGLSVTVKLVVVNRQATVSVIPSASSLVMKALNEPVRDRKKVKHVVHDGNITLDQVIDVARVMRERSMARELSGTVKEILGTCVSIGCSVNGENPRTLQQQITDGELEIPEE 193 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig115.118.1 >prot_P-littoralis_Contig115.118.1 ID=prot_P-littoralis_Contig115.118.1|Name=mRNA_P-littoralis_Contig115.118.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=154bp VILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLback to top mRNA from alignment at P-littoralis_Contig115:412921..415775- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig115.118.1 ID=mRNA_P-littoralis_Contig115.118.1|Name=mRNA_P-littoralis_Contig115.118.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2855bp|location=Sequence derived from alignment at P-littoralis_Contig115:412921..415775- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig115:412921..415775- >mRNA_P-littoralis_Contig115.118.1 ID=mRNA_P-littoralis_Contig115.118.1|Name=mRNA_P-littoralis_Contig115.118.1|organism=Pylaiella littoralis U1_48|type=CDS|length=462bp|location=Sequence derived from alignment at P-littoralis_Contig115:412921..415775- (Pylaiella littoralis U1_48)back to top |