prot_P-littoralis_Contig115.106.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.106.1
Unique Nameprot_P-littoralis_Contig115.106.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length799
Homology
BLAST of mRNA_P-littoralis_Contig115.106.1 vs. uniprot
Match: A0A6H5JA21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA21_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.390e-27
Identity = 347/816 (42.52%), Postives = 387/816 (47.43%), Query Frame = 0
Query:   14 QPQQQSSPWAPFVEIVLRHPFGLSAASALPNLDWPDIMQSHMITATKKLMTSRYVEDVLVDGVPSGLEVDQSRFHFHPLHAAAAYGRGLPASHLSALLLPTTAAA-TPRSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTTAK-----NAGFDCNAKDGYGRTGLHWASAAGQADWISALILAGADPDATDVRNVSPLQDAVEGEHTSAVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------PSSRVADPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRAIASMTFAQVMTAAQAGAAEGAAEAVAVLTAXXXXXXXXXXXXXXXXXXXXXXXGGGTIEFPSREHGSTPLDVVGLGMLGSDEDPTQRMLDETPEEYAQRRDPETMEAIRQALRRAPAERAWRRRSWLVMLRAAAEV------TRGKRELSSATGTESFVELIGGGLVLG-VNRGKG--------ENKDGGQGXXXXXXXXXXXXXXXXXXSRGCGRGGDDAGVVNGKGDGSEEEKDAAEGSKRVRRGGGDDGNDRAVAKVVETETEMGEDPAKSFPVATAEEEEGVSARAQQG---PREGVVCTAMADDGTLAGDGIRGCNXXXXXXXXXXXXXXXXXXMKEMRYLCGRLFDLAAVEEGAFRRVLSYL 798
            Q QQQ   W P ++ V+   FG     ALP+LDWPDI++ H  T   +L+    + D+L D   + + VD ++F FHP HA AAYG GLP S LSAL+ P  +AA + R  A       XXXXXX                                                    GTT        NAGF C+A+D   RT LHW S  GQADWISALI AGADP                         XXXXXXX                                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       PS+R+A PPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS     S       T                                                        TP+ VVGLG  G DEDPT R+  E+  E+A+RRDP+TMEAIR ALR APA+RAWRRRSWLVMLRA+AE       TR K ELSS  G  S V+LI   LVLG  +R KG        E   GG GXXXXXXXXXXXXXXXXX                          D  E +   +R             V   E    E PAK  P A     EG    A  G    RE      + + G   G    G                     + +R+LCGRLFDLAAVEEGAFR V+ +L
Sbjct:   10 QQQQQEDSWDPVIKNVMTSTFGTLGIRALPDLDWPDILRFHARTVATQLLRGGDINDLLADDTNAFISVDNAQFVFHPFHAVAAYGHGLPTSLLSALVSPAASAAESSREFADRAAAALXXXXXXATDDHPAADALAPRESRAPATAEAVSD-------------------------GTTXXXXXXXXNAGFHCDARDERLRTALHWGSTTGQADWISALIRAGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRLSDGAGYGGDGGTPLILAAREGNAEIARLLCDAGASLEDRDGIGFTALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSARIAYPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLPAPSNAPPPPST--------------------------------------------------------TPIGVVGLGHCGRDEDPTLRLPAESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRASAEAEAAAKATRKKWELSSMAG--SVVDLIDNRLVLGETSREKGAKDAVDKKERVTGGAGXXXXXXXXXXXXXXXXXAEDATAXXXXXXXXXXXXXXXXXXXXDGDEAAAXXKRE-----XXXXXXGVAAEEACAREGPAKETPPAA--HREGAHLDADGGHNSSREEETAVVVGEQGEGRGQAREGA---------AGDDGGDGKGARVLRWLCGRLFDLAAVEEGAFRNVVLFL 726          
BLAST of mRNA_P-littoralis_Contig115.106.1 vs. uniprot
Match: D7FPM3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM3_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 5.340e-23
Identity = 130/300 (43.33%), Postives = 152/300 (50.67%), Query Frame = 0
Query:  515 STPLDVVGLGMLGSDEDPTQRMLDETPEEYAQRRDPETMEAIRQALRRAPAERAWRRRSWLVMLR------AAAEVTRGKRELSSATGTESFVELIGGGLVLG-VNRGKG--------ENKDGGQGXXXXXXXXXXXXXXXXXXSRGCGRGGDDAGVVNGKGDGSEEEKDAAEGSKRVRRGGGDDGNDRAVAKVVETETEMGEDPAKSFPVATAEEEEGVSARA-QQGPREGVVCTAMADDGTLAGDGIRGCNXXXXXXXXXXXXXXXXXXMKEMRYLCGRLFDLAAVEEGAFRRVLSYL 798
            +TP+ VVGLG  G DEDPT R+  E+  E+A+RRDP+TMEAIR ALR APA+RAWRRRSWLVMLR      AAA+ TR K ELSS  G  S V+LIG  LVLG   R +G        E   GG  XXXXXXXXXXXXXXXXXX                 GD         + +    R G     D A + V   E    E  AK  P A   E   + A     G   GV      + G   G+   G                     + +R+LCGRLFDLAAVEEGAFR V+ +L
Sbjct:  410 TTPVGVVGLGNCGRDEDPTLRLTTESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRVSAEAEAAAKATRKKWELSSMAG--SVVDLIGNRLVLGEAGREQGAKDAVDKEERVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGD---------KAAXXXXREG-----DEAPSGVAAEEACAREGSAKEAPPAAHREGAHLDADGGNNGSHGGVTAVVAREQGEAQGEAGEGAGGDDVGDGDGA---------RVLRWLCGRLFDLAAVEEGAFRNVVLFL 684          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA21_9PHAE1.390e-2742.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPM3_ECTSI5.340e-2343.33Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 274..289
score: 43.35
coord: 322..336
score: 41.42
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 372..401
e-value: 0.026
score: 23.7
coord: 339..368
e-value: 310.0
score: 8.8
coord: 207..236
e-value: 0.13
score: 21.4
coord: 240..269
e-value: 210.0
score: 10.1
coord: 408..437
e-value: 89.0
score: 11.9
coord: 306..335
e-value: 0.095
score: 21.8
coord: 273..302
e-value: 0.012
score: 24.9
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 207..238
e-value: 0.0068
score: 16.8
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 245..335
e-value: 1.8E-13
score: 50.9
coord: 353..435
e-value: 1.6E-9
score: 38.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 372..404
score: 10.97998
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 306..338
score: 11.46076
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 273..305
score: 12.58258
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 207..239
score: 10.95327
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 277..376
e-value: 3.2E-25
score: 90.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 377..522
e-value: 2.7E-11
score: 45.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 174..276
e-value: 2.3E-19
score: 71.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 79..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..702
NoneNo IPR availablePANTHERPTHR46224ANKYRIN REPEAT FAMILY PROTEINcoord: 340..453
coord: 243..400
coord: 167..366
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 273..304
score: 11.373236
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 372..398
score: 10.418106
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 306..338
score: 10.09973
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 207..238
score: 9.993605

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:366586..378878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.106.1mRNA_P-littoralis_Contig115.106.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 366499..380572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.106.1 ID=prot_P-littoralis_Contig115.106.1|Name=mRNA_P-littoralis_Contig115.106.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=799bp
MSDERETQPQPQLQPQQQSSPWAPFVEIVLRHPFGLSAASALPNLDWPDI
MQSHMITATKKLMTSRYVEDVLVDGVPSGLEVDQSRFHFHPLHAAAAYGR
GLPASHLSALLLPTTAAATPRSGAGAGAGAGAGAGAGAGAGATATAAVAA
TATATSTLPWAAAAAAAAATATTATTATATVAPAGQGQAGTTTAKNAGFD
CNAKDGYGRTGLHWASAAGQADWISALILAGADPDATDVRNVSPLQDAVE
GEHTSAVRSLLEGGACVDVRLDRGGTPLILAARRGYPEIVRLLCDAGAGL
DVKDADGYAALTMAVAQHSLEVVEVLLGHGADANTESRTKMTPLLFSVAL
EDAAIIRALLRFGADASHAGLGDLTPLHIAAGKDNTDLIQDLLRAGADPS
SRVADPPPRSTPLHNACRWTRLQAVKALLLGGANETLGDLTPPPSSRAIA
SMTFAQVMTAAQAGAAEGAAEAVAVLTAAAGAAAGAALATGIVAAAAAVA
AGGGTIEFPSREHGSTPLDVVGLGMLGSDEDPTQRMLDETPEEYAQRRDP
ETMEAIRQALRRAPAERAWRRRSWLVMLRAAAEVTRGKRELSSATGTESF
VELIGGGLVLGVNRGKGENKDGGQGGGGDAAKEAESGGAGGGGSRGCGRG
GDDAGVVNGKGDGSEEEKDAAEGSKRVRRGGGDDGNDRAVAKVVETETEM
GEDPAKSFPVATAEEEEGVSARAQQGPREGVVCTAMADDGTLAGDGIRGC
NGTGGCGDGGDGGGDGDEGMKEMRYLCGRLFDLAAVEEGAFRRVLSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf