prot_P-littoralis_Contig115.99.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.99.2
Unique Nameprot_P-littoralis_Contig115.99.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1178
Homology
BLAST of mRNA_P-littoralis_Contig115.99.2 vs. uniprot
Match: D7FPM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM4_ECTSI)

HSP 1 Score: 652 bits (1681), Expect = 3.720e-212
Identity = 533/1227 (43.44%), Postives = 635/1227 (51.75%), Query Frame = 0
Query:    1 MLRYRGQPRAFRCLVRVLDPTARQVWQPISTSNAAKGVDDERHKAAAPAAYYRRIRRSRATAGNKHDGISGDLQGNHIPAAKVTSAAAAAPAPPALVKRAAGGEGPELRAWQLAMLELARRHSVLLTSRNSSKDPNKVSQWTVEYIPKVLEAWRKVVDGECGRKMWFRGAAKFYAPLLGGVWPKMANHFLADIIRACNGNDGNGAAVEAGREASSSRSICLRSLATTLTLAVSEFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKP-HDEQLNWRRTLEILKEARLAGVEIHPDLMVLVLSKAPVGNSRKVSHLVSAQGSKIYGFLA-TPDMLAAAAVAHWREGVVVGAARHLDSMEAKVKSVAKKQKAASPTSPLVQEWLAADVKVLRAVAEAAASGSASRHPADARQWPWRLVVVDIYGRASRWKEAAETFDAFLGEMTFLSAPGVERLTGSSSSSRHQRDRGAEVGVQK---------------AQARXXKTTCVRLPMPDDFDSDGSGIGTSGGRYDGDDRSETARGMSVLPLAGWVCFHPSALMHAATAYLKLGRVEEAAEVLSYLKASVSPSVVSAAAGAGRKSDVGTSRHGGRGSGGIEDDGRRRGDVTSSDLPAAVVCPPDPAWIKGAVRGFARFGRWDLAREVLSAEIWNWLSLEMETTSKQSGSGXXXXXXXXXXXXXXXXXXAPVVESLEAXXXXXXXXXXXXXXQTAGSRACLELLK----------------------------------------SIRASGLLGGGEG----------TDSPAAAINEEGKKVASRGGVRGRGHDQPEPSSGAELLRKPAGTYTMSVDQGQDRHRHRQASSLAYTEALRWLLPGEFGGPD----GEVTAAPGAGSSGEGPSPSHRPHASEGKSLSSSSKDCRSLLLSRCKNVSQEAVVQAIHRAWSPDGHRRESXXXXXXXXXXXXXXXXXRRDAAFALYEAGVESNAIPADAHWVSRSAGVLNLDCVDYQMHHGVPLAALNLVLNDMRQKYAYEESVGRHVHQPYADLIMIASIKGSPRALDTVREVLWLLGSSRFDESLEGGLELIGRVGWGPKATPDAAAAAAAPMRQNERKDETATKPERRLLCEVQETVLRSPSRGVVLSLPRRALQGWLLAEGRA---RNKGGXXXXXXXXXXXXXLWTPSWVEDGIDVVPPGLPGLGTVGSLRADGANGVGVGVGGGD 1153
            MLR RGQ  A R L   L PT R   +      AA G         A            A +G   DG+ G    + +PAA   + A A     A   +AAG    ELRAWQ AM+ELA+RHS      + SKDPNKVS+ T E+IP                               GGVWPKMANHFLA++IRAC+G    GAA   G  AS    +     AT  T       SXXXXXXXXXXXXXXXXXXXXX             + P  D +L+WRR LE++KEA LAGVE+ PDLM LVLSK PVGNSRK+S LVS +GS+ +G  A TPDMLA AAVAHWREGVV GAARHLD M A++K +  K+  ASP+S LVQEWLAAD + +R  A AAA  +   HP + RQWPWRLV VDIYGRA+RW  AAE FDAF+G+M F S+    R                                       AR  K T  RLP+P++F                    +     S LPL  W+ FHPSA+ HA TAYLKLGRVEEAAEVLS+LKASV     + AAG      VG S  GG G GG      R G   S   P  V    DP W++G VRGF R G+WD+A EVLS +I  W S E     ++SG G                      ESLEA      X       Q AGS+ACLELLK                                        ++ A G  G  +G          T + AAA +   ++      V G+G D PEP  G   + K  G  + S +   DRHR     +L YTEA+RWLLPG    PD    G    A G      G  P+H   A E       S  CRS+L S C++ SQEAV+Q + + W   G    +                 RR A+ ALYEAGVES A+PADAHW S+SAGVLNLDCVDYQMHHG+PLAALNLVL+DMR+KYAYEE+V RHVH P  DL+MI S+KGS  ALD ++ +LWLLGS RFD  L+G LEL+G+ G       D AA      R+    ++   + +  LL E QE+ +RSP RG+V+SL RR LQGWLL EGRA    N GG XXX         LW PSWVEDGIDVVPP LPGL T    R DG + V  GVG G+
Sbjct:    1 MLRCRGQYLALRRLGEALGPTTRWDLKRRGVLLAAAGXXXXXSSGGA------------ALSGGIPDGVPG----SKVPAAYAATGAFAH----ADDNKAAGSASSELRAWQAAMIELAQRHSAKQAIGHDSKDPNKVSKHTAEHIP-------------------------------GGVWPKMANHFLAELIRACDGG-ARGAAAGVGPWASPGWDVARIQAATGST-------SXXXXXXXXXXXXXXXXXXXXXISQARVSAAGAGAEFPLPDCRLDWRRALEVIKEAHLAGVEVRPDLMALVLSKVPVGNSRKISRLVSNKGSRAFGLQASTPDMLAVAAVAHWREGVVTGAARHLDEMFARIKKL-NKEMVASPSS-LVQEWLAADRQRIRDAAAAAAVETPPSHPPE-RQWPWRLVAVDIYGRANRWAAAAEAFDAFIGDMGFPSSRNGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVSARIAKPT--RLPLPEEFGXXXXXXXXX---------XKAGEFSSPLPLQAWLSFHPSAIAHAITAYLKLGRVEEAAEVLSFLKASVRAGGATPAAGGLSPGYVGGSEEGG-GYGG------RAGSDPSLSGPPTV----DPGWMEGTVRGFTRAGKWDMALEVLSTDIVAWFSAETGG-DRRSGDGGGGARL------------VAASESLEAFLEAKLXAKKPASGQVAGSKACLELLKVAAGAQRGVSGDGGAAIXXXXXXXXXXXXXXXDRPAASAVAVLAPGSRGREQGWQREETTPSATAATAAAPSPVARETHGSDRVPGKGCDTPEPGGGDARVGKAEGDGSGSSEPVVDRHRQ---DALVYTEAIRWLLPGGRLAPDRADGGTTPEAAG------GDIPAHLLPAIE-----LFSDGCRSMLRSGCRSASQEAVLQTMCKVWGGAGGTAVAAEDAGDATKER------RRSASLALYEAGVESKALPADAHWASQSAGVLNLDCVDYQMHHGMPLAALNLVLSDMRRKYAYEETVERHVHPPQGDLVMITSVKGSWPALDNLKGILWLLGSCRFDGPLDGDLELLGQPGERRHPPTDNAA-----TRERGDGNQGGRRRQLELLREAQES-MRSPGRGLVVSLSRRTLQGWLLREGRAWSRANVGGGXXXGR-------LWKPSWVEDGIDVVPPVLPGLLTA---RDDGTDVVAGGVGSGE 1094          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.99.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPM4_ECTSI3.720e-21243.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1145..1177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1030..1052
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..687
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 875..901
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1162..1177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..795
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 810..847
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:353575..365072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.99.2mRNA_P-littoralis_Contig115.99.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 353552..365678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.99.2 ID=prot_P-littoralis_Contig115.99.2|Name=mRNA_P-littoralis_Contig115.99.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1178bp
MLRYRGQPRAFRCLVRVLDPTARQVWQPISTSNAAKGVDDERHKAAAPAA
YYRRIRRSRATAGNKHDGISGDLQGNHIPAAKVTSAAAAAPAPPALVKRA
AGGEGPELRAWQLAMLELARRHSVLLTSRNSSKDPNKVSQWTVEYIPKVL
EAWRKVVDGECGRKMWFRGAAKFYAPLLGGVWPKMANHFLADIIRACNGN
DGNGAAVEAGREASSSRSICLRSLATTLTLAVSEFSSESTSTAAAAAAAA
AAASAANIAGAGVGVSVGVGVDKPHDEQLNWRRTLEILKEARLAGVEIHP
DLMVLVLSKAPVGNSRKVSHLVSAQGSKIYGFLATPDMLAAAAVAHWREG
VVVGAARHLDSMEAKVKSVAKKQKAASPTSPLVQEWLAADVKVLRAVAEA
AASGSASRHPADARQWPWRLVVVDIYGRASRWKEAAETFDAFLGEMTFLS
APGVERLTGSSSSSRHQRDRGAEVGVQKAQARARKTTCVRLPMPDDFDSD
GSGIGTSGGRYDGDDRSETARGMSVLPLAGWVCFHPSALMHAATAYLKLG
RVEEAAEVLSYLKASVSPSVVSAAAGAGRKSDVGTSRHGGRGSGGIEDDG
RRRGDVTSSDLPAAVVCPPDPAWIKGAVRGFARFGRWDLAREVLSAEIWN
WLSLEMETTSKQSGSGSGSGGGSGGGGGGSGGGLAPVVESLEAFLESKLE
AKRQTPEQTAGSRACLELLKSIRASGLLGGGEGTDSPAAAINEEGKKVAS
RGGVRGRGHDQPEPSSGAELLRKPAGTYTMSVDQGQDRHRHRQASSLAYT
EALRWLLPGEFGGPDGEVTAAPGAGSSGEGPSPSHRPHASEGKSLSSSSK
DCRSLLLSRCKNVSQEAVVQAIHRAWSPDGHRRESEEEEEKEGADDDATK
ERRRDAAFALYEAGVESNAIPADAHWVSRSAGVLNLDCVDYQMHHGVPLA
ALNLVLNDMRQKYAYEESVGRHVHQPYADLIMIASIKGSPRALDTVREVL
WLLGSSRFDESLEGGLELIGRVGWGPKATPDAAAAAAAPMRQNERKDETA
TKPERRLLCEVQETVLRSPSRGVVLSLPRRALQGWLLAEGRARNKGGGSG
GGGGGGGGGGLWTPSWVEDGIDVVPPGLPGLGTVGSLRADGANGVGVGVG
GGDDGSERSPFDAGTFSPSSLQEATPE*
back to top