prot_P-littoralis_Contig115.91.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.91.3
Unique Nameprot_P-littoralis_Contig115.91.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length228
Homology
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BLAST of mRNA_P-littoralis_Contig115.91.3 vs. uniprot
Match: D7FPM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM8_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 8.780e-82
Identity = 136/202 (67.33%), Postives = 154/202 (76.24%), Query Frame = 0 
Query:   26 PSSIIVSDTAPLPGGPCRLRRPSPCYTPSTPRHQVGGRIGRTLPYSSFPSCSVTRVVAATXXXXXXXTRAMSSYEWKNMSKQAQKANKEFSDLTKMEIRKAGEDEIDKVQKAVKAMEPFNDVFEVRREGLELFVELGPEVGTYWIKFDLSIHQICLMSPRSGPHRYIYDKESGLWIGEADEHDFRGMLTGDIIQSACGIPDF 227
            PS +  SD  PL G   R R P  C TP  P  +    + R++  +S             XXXXX   RAMSSYEWKNMS QAQKANKEF +L++ EIRKAGE+E+DKV+KA+KAMEPFNDVFEVRREGLE+F ELGPEVGTYWIKFDLSI+QICLMSPRSGPHRYI+DK SG WIGEAD+HDF+GMLT DIIQSACGIPDF
Sbjct:   35 PSLLAPSDDGPLLGPGGRRRPPPFCRTPRAP-DRPWPEVRRSVSSASXXXXXXXXXXXXXXXXXXAVARAMSSYEWKNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFNDVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 235
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BLAST of mRNA_P-littoralis_Contig115.91.3 vs. uniprot
Match: A0A1X2HKQ5_SYNRA (Ferroxidase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HKQ5_SYNRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.210e-6
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 0 
Query:  146 DVFEVRREGLELFVELGPEVGTYWIKFDLSIHQICLMSPRSGPHRYIYDKESGLWIGEADEHDFRGMLTGDIIQSACGIP 225
            D F+V      + ++LG   GTY I       QI L SP+SGP RY YDKES  W    D H   G+L  ++ + A G P
Sbjct:   31 DGFDVEYSQGVMTLKLGAH-GTYVINKQPPNQQIWLSSPKSGPKRYDYDKESNKWFYHRDNHTLDGLLNEELSE-ALGQP 108
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.91.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPM8_ECTSI8.780e-8267.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1X2HKQ5_SYNRA3.210e-640.00Ferroxidase n=1 Tax=Syncephalastrum racemosum TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002908Frataxin/CyaYSMARTSM01219Frataxin_Cyay_2coord: 118..221
e-value: 0.0022
score: -6.3
IPR002908Frataxin/CyaYPFAMPF01491Frataxin_Cyaycoord: 123..218
e-value: 9.4E-10
score: 38.5
IPR002908Frataxin/CyaYPROSITEPS50810FRATAXIN_2coord: 118..227
score: 11.050163
IPR036524Frataxin/CyaY superfamilyGENE3D3.30.920.10Frataxin/CyaYcoord: 114..222
e-value: 6.1E-12
score: 47.5
IPR036524Frataxin/CyaY superfamilySUPERFAMILY55387Frataxin/Nqo15-likecoord: 132..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:322412..323808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.91.3mRNA_P-littoralis_Contig115.91.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 321497..323824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.91.3 ID=prot_P-littoralis_Contig115.91.3|Name=mRNA_P-littoralis_Contig115.91.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp
MCPCGSDLWRRRLSSYSSLPTSGTSPSSIIVSDTAPLPGGPCRLRRPSPC
YTPSTPRHQVGGRIGRTLPYSSFPSCSVTRVVAATTTTTTTSTRAMSSYE
WKNMSKQAQKANKEFSDLTKMEIRKAGEDEIDKVQKAVKAMEPFNDVFEV
RREGLELFVELGPEVGTYWIKFDLSIHQICLMSPRSGPHRYIYDKESGLW
IGEADEHDFRGMLTGDIIQSACGIPDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002908Frataxin/CyaY
IPR036524Frataxin/CyaY_sf