mRNA_P-littoralis_Contig115.71.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: D7FPN5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN5_ECTSI) HSP 1 Score: 129 bits (324), Expect = 1.860e-32 Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 1
Query: 1 MAYGFTLLWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEIL 237
M +GF LLWKLFK+GLLATNAVTILHKQRFLRKY L EVD S SASAMKNQVVGLIAAVAYLRGPLIVLN+LTCVI +L
Sbjct: 1 MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 79
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A835YX81_9STRA (Yos1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX81_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.910e-18 Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEIL 237
LW LFK+GLL TNAV ILHK+RFLR AE D + +S +KNQ +GLI AVAYLRGPLI +N LTC E+L
Sbjct: 4 LWSLFKTGLLVTNAVAILHKERFLRPLGWAEPDPALGSSNLKNQAIGLINAVAYLRGPLIAINLLTCTFEML 75
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: K8ZAA6_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAA6_NANGC) HSP 1 Score: 78.2 bits (191), Expect = 3.020e-14 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEIL 237
+W L+KSGLL TN V +LH++RFLRKY L +V A ++++NQVVGL+ AV YL+ PLI LN +T VIE+L
Sbjct: 5 IWSLYKSGLLFTNGVAVLHRKRFLRKYGL-DVAEVADTTSIRNQVVGLLNAVQYLKVPLIALNIVTVVIELL 75
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A067C849_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C849_SAPPC) HSP 1 Score: 71.6 bits (174), Expect = 6.070e-12 Identity = 36/74 (48.65%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASAS-AMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
+WKL S LL+ NA+ ILH++RFLR+Y +++ S+ S +MKNQVVG + AV YLR PL+V+N + +E+L+
Sbjct: 4 IWKLIMSSLLSVNALAILHEKRFLRRYGYDQLEASSGGSPSMKNQVVGFLVAVQYLRMPLVVINIVAIFLELLM 77
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A3F2RI45_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI45_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.980e-11 Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
LW F + LL TNAV ILH++RFLR + +VD S+ +KNQ+VG + AV YLR PL+V+NTL ++E+++
Sbjct: 4 LWNFFLTSLLLTNAVCILHEKRFLRSHGWDKVD-SSQGMTIKNQIVGFLIAVQYLRFPLMVINTLMILLELVM 75
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A2D4BY06_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY06_PYTIN) HSP 1 Score: 68.6 bits (166), Expect = 6.980e-11 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
LW F S LL TNAV ILH++RFLRKY +VD S + ++NQ+VG + AV YLR PLIV+N L ++++++
Sbjct: 4 LWGFFLSSLLLTNAVCILHEKRFLRKYGWDKVDPSQGMT-IRNQIVGFLVAVQYLRVPLIVVNALMILLQLVM 75
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A8K1FQA8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQA8_PYTOL) HSP 1 Score: 68.2 bits (165), Expect = 9.540e-11 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
LW F S LL TNAV ILH++RFLR Y ++D S+ +KNQVVG + AV YLR PLI++N ++E+++
Sbjct: 4 LWDFFLSSLLLTNAVCILHEKRFLRPYGWDKID-SSQGMTIKNQVVGFLVAVQYLRVPLIIVNAFMILLELVM 75
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A0P1A8P8_PLAHL (Immediate early response 3-interacting protein 1-like n=12 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1A8P8_PLAHL) HSP 1 Score: 65.5 bits (158), Expect = 8.480e-10 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
LW + LL TNAV ILH++RFLR + +VD S+ +KNQ+VG + AV YLR PL+++NTL ++E+++
Sbjct: 4 LWNFVLTSLLLTNAVCILHEKRFLRSHGWHKVD-SSQGMTIKNQIVGFLIAVQYLRFPLMIINTLMILLELVM 75
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: A0A7S2ULA9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA9_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.940e-9 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 10 GFTLLWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSA---SASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
GF++ W LFK GLL TN++ ILH++RFL +Y L E++ S ++ Q +GL+ AV YLR P+I +N LT V E++L
Sbjct: 30 GFSI-WNLFKVGLLLTNSILILHRRRFLARYGLDELNNMGCDPSQKPLQAQAIGLLQAVQYLRVPVIGVNMLTIVFEMIL 108
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Match: K3WSH3_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSH3_GLOUD) HSP 1 Score: 63.5 bits (153), Expect = 4.040e-9 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 1
Query: 22 LWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNQVVGLIAAVAYLRGPLIVLNTLTCVIEILL 240
LW + LL TNAV ILH++RFL+ Y +V+ S + +KNQVVG + AV YLR PLIV+N V+E+++
Sbjct: 4 LWNFVLTSLLLTNAVCILHEKRFLKPYGWHKVEASEGMT-IKNQVVGFLVAVQYLRVPLIVINAFMIVLELVI 75 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig115.71.1 >prot_P-littoralis_Contig115.71.1 ID=prot_P-littoralis_Contig115.71.1|Name=mRNA_P-littoralis_Contig115.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp MAYGFTLLWKLFKSGLLATNAVTILHKQRFLRKYHLAEVDRSASASAMKNback to top mRNA from alignment at P-littoralis_Contig115:182777..191959- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig115.71.1 ID=mRNA_P-littoralis_Contig115.71.1|Name=mRNA_P-littoralis_Contig115.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9183bp|location=Sequence derived from alignment at P-littoralis_Contig115:182777..191959- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig115:182777..191959- >mRNA_P-littoralis_Contig115.71.1 ID=mRNA_P-littoralis_Contig115.71.1|Name=mRNA_P-littoralis_Contig115.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=243bp|location=Sequence derived from alignment at P-littoralis_Contig115:182777..191959- (Pylaiella littoralis U1_48)back to top |