prot_P-littoralis_Contig115.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.14.1
Unique Nameprot_P-littoralis_Contig115.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length206
Homology
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BLAST of mRNA_P-littoralis_Contig115.14.1 vs. uniprot
Match: A0A6H5JTW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW2_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.360e-37
Identity = 76/124 (61.29%), Postives = 92/124 (74.19%), Query Frame = 0 
Query:   81 AFSFAGIENELLSRSATRT-TAKIPTGDSGEGGGVEEEESAWLPRFFPPPSPGDQDVEGGNGIRPLIELPLDGILLQLFPALLIAVVGTFLTIAVQFEASKFDGMVGEDGRTPVITDLRDTRTE 203
            AFS + +E+EL +R+A +  T +     SG G   +E E AWLPRFFPPP P  QD E G+ I+PLIELPLDGILLQLFPALLI V+G FLT+ +Q EA +FDGMVGEDG   V+TDLRDTRT+
Sbjct:  160 AFSVSALEDELQARAAQKAATTQRDGARSGGGTTADEGEDAWLPRFFPPPLP-TQDDEEGDAIQPLIELPLDGILLQLFPALLIGVLGLFLTVVIQVEAGRFDGMVGEDGGVVVVTDLRDTRTQ 282
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTW2_9PHAE1.360e-3761.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:47376..47993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.14.1mRNA_P-littoralis_Contig115.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 46936..47995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.14.1 ID=prot_P-littoralis_Contig115.14.1|Name=mRNA_P-littoralis_Contig115.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp
MKTPFSTTAGQPRRGATGRRGRQDSDRSMVGVICRAGGGKGGLYDDDKEK
GDAEDDAEGDEDDQSITTNTGGGGGDDSSPAFSFAGIENELLSRSATRTT
AKIPTGDSGEGGGVEEEESAWLPRFFPPPSPGDQDVEGGNGIRPLIELPL
DGILLQLFPALLIAVVGTFLTIAVQFEASKFDGMVGEDGRTPVITDLRDT
RTELP*
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