prot_P-littoralis_Contig115.7.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.7.4
Unique Nameprot_P-littoralis_Contig115.7.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length85
Homology
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BLAST of mRNA_P-littoralis_Contig115.7.4 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 7.470e-7
Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:   22 DRYATALIPERLRHIWEAWFVETDGNCLWRALAKALWDCDQFWPHLK 68
            D  AT ++   LR  + A +VE DGNC WR++AKALW  D++W  LK
Sbjct:   87 DPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLK 133
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.7.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE7.470e-748.94SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:33394..34451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.7.4mRNA_P-littoralis_Contig115.7.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 33357..34480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.7.4 ID=prot_P-littoralis_Contig115.7.4|Name=mRNA_P-littoralis_Contig115.7.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
MLPATAPGRNTPNWIQNLPRLDRYATALIPERLRHIWEAWFVETDGNCLW
RALAKALWDCDQFWPHLKARKKNEATGATGWRNW*
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