prot_P-littoralis_Contig115.2.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.2.2
Unique Nameprot_P-littoralis_Contig115.2.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length614
Homology
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: D7FPP0_ECTSI (Cryptochrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP0_ECTSI)

HSP 1 Score: 940 bits (2430), Expect = 0.000e+0
Identity = 466/542 (85.98%), Postives = 498/542 (91.88%), Query Frame = 0
Query:   82 MSSSEGPASIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTDGSAXXXXXXXXX----------RGAKPAPKKRAKR 613
            MSSS+ P+SIHWFRKGLRLHDNRALLEAC+G   ++PLFV+DSDPASPESRAG  RTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLP LFEEWN+ KLTFEADSEPRSR RDREVG LA+ AGVQVLIRGTST+RNL+NYH LMGKK GTYLK+YGAF+KLHDNAGPVP CAP ISGDLP P ASPDDA YDRF+IPS++DLGV   AKALKFRGGEREAL+RLE VMAREDWIS+FEKPKTSPNSIEPSTTVLSMYISHGCLS R+FWHALCKVY+KKGGSKPPVSLKGQLLW+EFNYFSGYSIP+FDKMVGNPVIRQIPWDKDEEKL AWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSP+AFGKKTD+NGDYIKKY+P LRKFP KYIYEPWTAPL+VQRGCGCIIGKDYPKPIVDH D SKANMAKM+DAYDA++EA+A+ES  DG +XXXXXXXXX          RGA+PA  KR KR
Sbjct:    1 MSSSKEPSSIHWFRKGLRLHDNRALLEACNGTASLYPLFVLDSDPASPESRAGPLRTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDREVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLKTYGAFLKLHDNAGPVPDCAPDISGDLPAPGASPDDAEYDRFSIPSLSDLGVEPLAKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPSFDKMVGNPVIRQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPIAFGKKTDQNGDYIKKYLPALRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHADTSKANMAKMNDAYDAHQEAQAAESHDDGGSXXXXXXXXXXXXXXARSRARGAQPASSKRVKR 542          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A835Z8B1_9STRA (DNA photolyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B1_9STRA)

HSP 1 Score: 573 bits (1476), Expect = 2.420e-197
Identity = 278/487 (57.08%), Postives = 351/487 (72.07%), Query Frame = 0
Query:   91 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVY-SKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDA 576
            IHWFRKGLRLHDN ALL+A   A  V+P+F++D   A+P ++ G  R AFLLE+L DLD QL+  GSRL+VV+G P E  P+LF EW+++ LTFE D+EP +++RD+EV ++A   GV V    + T+ NL+ Y    G       KSYG F+KL D+ G VP C   ++ D+     S   AG     +PS+        A  L + GGE  AL+R++  +AR+ WI++FEKPKTSPNS+EPSTTVLS Y+  GCLS R F+H L ++Y +  G +KPPVSL GQLLWREF Y  G+++P+FD+M GNP+ RQ+PWD + + L+AW+E+RTG+P+IDA MTQL+ EGWIHHLARHAVACFLTRGDLWQSWE GA VFD+ LLDADWS+N  NW WLSCS+FFYQYFRCYSPVAFGKKTD  G YI+KY+P L+ +P KYIYEPW AP  VQ   GC++G DYPKPIVDH  VSK NM +M  AY A
Sbjct:    5 IHWFRKGLRLHDNPALLQAAKEAQQVYPVFMLDPHFANP-AKVGQLRYAFLLETLSDLDTQLKGIGSRLYVVQGNPAERFPELFREWSVSLLTFETDTEPYAKKRDQEVCKIAETCGVTVAQHASHTLHNLDRYEAKAG--ASPLPKSYGPFLKLFDSLGAVPQCVETVTVDIMPQDGSAVPAG--EHTVPSLDTTPYPPLANPLLYPGGETAALARMQLHLARKQWIAKFEKPKTSPNSLEPSTTVLSPYLKFGCLSSRLFYHKLAEIYKASPGHAKPPVSLHGQLLWREFFYMCGHTVPHFDRMEGNPICRQVPWDSNAQLLAAWEESRTGYPFIDAIMTQLRTEGWIHHLARHAVACFLTRGDLWQSWEAGAVVFDKYLLDADWSVNTANWMWLSCSSFFYQYFRCYSPVAFGKKTDPTGAYIRKYLPQLKNYPDKYIYEPWLAPKAVQEKAGCVVGCDYPKPIVDHKQVSKDNMDRMKAAYAA 486          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: F2U6L6_SALR5 (DNA photolyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6L6_SALR5)

HSP 1 Score: 549 bits (1415), Expect = 6.690e-188
Identity = 283/510 (55.49%), Postives = 354/510 (69.41%), Query Frame = 0
Query:   85 SEGPASIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAGPVPAC--APCISGDLP--TPRASPDDAGYDRFAIPSMADLGVAM--PAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSK-KGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQT 587
            S G  SIHWFRKGLRLHDN ALL A  GA  V+P+FV+D   A PE   G  R  FLLESL+DLD+ LR  GSRL+V++GKP + L + F+EW + +LTFE D+EP ++ RD +  ELA   G++V+     T+ + E Y    G      L +Y +F  L    G VPA   AP    D P  +     D     RF +PS+ D+G         ++F GGE EAL R+   + R+ WI+ FEKPKTSPN++EPSTT LS Y+  GCLSPR F+H L +VY++ +  +KPPVSL GQLLWREF +  GY++ NFD+M GN + RQI WD ++  L+AW+ ARTG+PWIDA MTQL+ EGW+HHLARHAVACFLTRGDL+QSWE GA VFD LL+DADW +N+ NW WLSCS+FFYQYFR YSPVAFGKKTD +G YI+KY+P L+ FP KYIYEPW AP  VQR CGCIIGKDYP+PIVDH +VS AN A++   YDA K+AE ++  T
Sbjct:    2 SGGAVSIHWFRKGLRLHDNAALLAALKGAKQVYPVFVLDPHFAKPEF-VGVVRYNFLLESLRDLDKSLRTLGSRLYVLKGKPLQALEEKFKEWEVTRLTFERDTEPYAKLRDTQARELAEKHGIEVITTVGHTLHDPEQYIAKAGGADKIPL-TYSSFGTLFRRLGKVPAALSAP-TKEDFPQSSTLVRTDALDDHRFDVPSLKDMGYEWNDDEHEVRFPGGETEALERMRRHLQRKAWIAHFEKPKTSPNTLEPSTTGLSPYLKFGCLSPRLFYHELARVYAEYRDHAKPPVSLHGQLLWREFFHMCGYAVKNFDRMEGNRICRQIDWDTNDALLAAWENARTGYPWIDACMTQLRREGWLHHLARHAVACFLTRGDLYQSWEKGAQVFDRLLVDADWHLNSANWMWLSCSSFFYQYFRVYSPVAFGKKTDPSGAYIRKYLPQLKAFPDKYIYEPWKAPPGVQRSCGCIIGKDYPEPIVDHAEVSAANKARIRACYDALKQAEKAKKTT 508          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A3B1IHH9_ASTMX (Cryptochrome-1-like n=6 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1IHH9_ASTMX)

HSP 1 Score: 546 bits (1408), Expect = 3.980e-187
Identity = 277/504 (54.96%), Postives = 352/504 (69.84%), Query Frame = 0
Query:   91 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPES-RAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGV-AMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTDGSA 591
            IHWFRKGLR+HDN AL  A      ++P+F++D  P  P++ + G  R  FL+E+L+DLD  LR   SRLFV+RG P EV P LFEEW + +LTFE DSEP S++RD+EV +LA+  GV+++ + + T+ NLE    +  GK   TY++      K+     PVPA        + TP +  D   Y    +P++ +LG  +     + + GGE+EAL RL+  M R +W+  FEKP+TSPN+++PSTTVLS Y+  GCLS R FW  L +VY  K  S PPVSL GQLLWREF Y + Y IPNF+KM GN +  Q+ WD + E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G  VF+ELLLDADW++N  NWQWLS SAFF+QYFR YSP+AFGKKTDKNGDYIKKY+PIL+KFP +YIYEPW AP  +Q   GCI+GKDYP+PIVDH  +SK N+ +M  AY     A+ S   +DGSA
Sbjct:    6 IHWFRKGLRVHDNPALKYALHDCKHMYPVFILD--PWFPKNAQVGINRWRFLIEALKDLDSSLRKLNSRLFVIRGVPREVFPRLFEEWKVTRLTFEVDSEPYSQKRDKEVMDLAKQHGVEIITKISHTLYNLERVIEENNGKAPLTYVRFQTVLNKIGPPKRPVPAPTREDMKGVSTPSSETDKENY---GVPTLDELGQDSTTLGPVLYPGGEQEALRRLDEYMQRTNWVCSFEKPQTSPNALKPSTTVLSPYVKFGCLSARTFWWRLAEVYHGKKHSAPPVSLHGQLLWREFFYTAAYGIPNFNKMEGNTICVQVDWDSNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWALNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDKNGDYIKKYLPILKKFPAQYIYEPWKAPKSIQEQAGCIVGKDYPRPIVDHDTISKKNIQRMKAAY-----AKRSPDLSDGSA 499          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: W7TK49_9STRA (6-4 photolyase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK49_9STRA)

HSP 1 Score: 546 bits (1407), Expect = 6.130e-186
Identity = 280/517 (54.16%), Postives = 355/517 (68.67%), Query Frame = 0
Query:   90 SIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGD-LPTP------------------RASPDDAGYDR-----FAIPSMADLGVAMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGG--SKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKE 579
            S+HWFRKGLRLHDN ALLEAC+GA  V+P+F++D   A P+   G  R  F+L+++++LD+ LR  GSRLFVV+G+P E LP LF EW + KLTFE+D+EP ++ RDR V ELA    V V    + T+ + E Y  +L GK V T    Y +F+KL  + GPV   A  +    LP P                   A  ++   DR     F++P ++ +G         + GGE  AL+R++  +A   +I  FEKPKTSPN++ PSTTVLS Y+ HG LS R F+H+L  + ++  G  ++PPVSL GQLLWREF Y  G++ PNFDKMVGNP+ RQIPW K+ E L AW+EARTG+P+IDA MTQL++EGWIHHLARHA+ACFLTRGDLWQSWE+GA VF++ LLDADWS+N  NW WLS SAFF+QYFR YSPVAFG KTDK G+YI+KY+P+LRK P KYIYEPW AP  VQ   GC++G+DYP P+VDH  VSK  M KM  AYDANKE
Sbjct:   50 SLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDV-IGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTV---YQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKE 562          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: UPI001955C6E5 (cryptochrome circadian regulator 5 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955C6E5)

HSP 1 Score: 541 bits (1394), Expect = 4.710e-185
Identity = 276/489 (56.44%), Postives = 341/489 (69.73%), Query Frame = 0
Query:   90 SIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK---FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAY 574
            S+HWFRKGLRLHDN AL+ A      ++PLF++D    S  +R G  R  FL+E+L+DLD  L+   SRLFVV G P EVLP LFE+W I +LTFE D+EP SR RD EV +LA+  GV+V+ + + T+ N++    +  GK   TY++       +     PVPA        + TP +   +   ++F IP++ DLG  + A +L    F GGE+EAL RL+  M R  W+ +FEKP+TSPN++ PSTTVLS Y+  GCLS R FW  L  VY  K  S+PPVSL GQLLWREF Y +   IPNFD+M GNP   Q+ WD   E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G  VF+ELLLDADWS+N  NWQWLS SAFF+QYFR YSPVAFGKKTDKNGDYIKKY+P+L+KFP +YIYEPW AP  +Q   GCI+GKDYP+PIVDH  V K N+ +M  AY
Sbjct:    5 SVHWFRKGLRLHDNPALIAALKDCRHIYPLFLLDPW-YSTNTRIGINRWRFLMEALKDLDSSLKKLNSRLFVVSGPPTEVLPKLFEKWEITRLTFEVDTEPYSRSRDEEVMKLAKEYGVEVIPKISHTLYNIDRIIDENNGKTPLTYVRFQSVLKAIGPPKKPVPAPTKEDMSGVSTPISEDHE---EKFGIPTLEDLG--LDASSLGPDLFPGGEQEALRRLDEHMQRPGWVCKFEKPQTSPNALTPSTTVLSPYVRSGCLSARTFWWRLSDVYRAKKHSEPPVSLHGQLLWREFFYTTAVGIPNFDRMEGNPHCVQVDWDNHPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPVAFGKKTDKNGDYIKKYLPLLKKFPAEYIYEPWKAPRSIQERAGCIVGKDYPRPIVDHEVVHKKNIQRMKAAY 487          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A3B4DKP2_PYGNA (Cryptochrome-1-like n=6 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4DKP2_PYGNA)

HSP 1 Score: 541 bits (1393), Expect = 1.690e-184
Identity = 276/501 (55.09%), Postives = 347/501 (69.26%), Query Frame = 0
Query:   91 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPES-RAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTD 588
            IHWFRKGLRLHDN AL  A    + ++P+F++D  P  P++ + G  R  FL+E+L+DLD  L+   SRLFVVRG P +V P LF+EW + +LTFE D+EP S+ RD+EV +LA+  GV+V+ + + T+ N+E    +  GK   TY++       +     PVPA        + TP +   D  Y    IP++ +LG          + GGE+E+L RLE  M R  W+  FEKP+TSPN++ PSTTVLS Y+  GCLS R FW  L +VY  +  S PPVSL GQLLWREF Y +   IPNF KM GNP   Q+ WD + E L+AWKEARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G  VF+ELLLDADWS+N  NWQWLS SAFF+QYFR YSP+AFGKKTDKNGDYIKK++P+L+KFPP+YIYEPW AP  VQ+  GCI+GKDYP+PIVDH  VSK N+ +M  AY A +  + S SQT+
Sbjct:   12 IHWFRKGLRLHDNPALKAALHDCEHIYPIFILD--PWFPKNAQVGINRWRFLVEALKDLDSSLKKLKSRLFVVRGVPRDVFPKLFKEWKVTRLTFEVDTEPYSQIRDKEVMDLAKQHGVEVITKISHTLYNIERIIEENNGKPPLTYVRFQTVVKAIGTPKRPVPAPTREDMKGILTPSSDKHDENY---GIPTLKELGQDSSTLGPDLYPGGEQESLRRLEEYMQRTGWVCSFEKPQTSPNALSPSTTVLSPYVKFGCLSARTFWWGLAEVYQGRKHSAPPVSLHGQLLWREFFYTAAVGIPNFSKMEGNPNCVQVDWDSNPEHLAAWKEARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDKNGDYIKKFLPVLKKFPPEYIYEPWKAPKSVQQQAGCIVGKDYPRPIVDHDVVSKRNIQRMKAAY-AKRHGDPSSSQTE 506          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: H2MAP7_ORYLA (Cryptochrome-1 n=10 Tax=Oryzias TaxID=8089 RepID=H2MAP7_ORYLA)

HSP 1 Score: 539 bits (1389), Expect = 2.980e-184
Identity = 277/504 (54.96%), Postives = 348/504 (69.05%), Query Frame = 0
Query:   91 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDR-----FAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQT 587
            IHWFRKGLRLHDN AL+ A      ++PLF++D      ++ AG  R  FL+ SLQDLD  LR   SRLFVVRGKPEEVLP LF +WN+ KLT+E D+EP SR RD+ V  LA    +QV+ + + T+ +++    +  GK   TY +       L     P+PA         PT     + A +       + IPS+ +LG+   + A + F GGE+EAL RL++ M R  W+  FEKP TSPNS+ PSTTVLS Y++ GCLS R FW  L +VY  K  S PPVSL GQLLWREF Y +   IPNF+KM GNP   Q+ WD+++E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G  VF++LLLD DW++N  NWQWLS S FF+Q+FR YSPVAFGKKTDKNGDYIKKY+PIL+KFPP+YIYEPW AP  VQ+  GCI+GKDYPKPI++H  +SK N+ +M  AY A + + ++ES T
Sbjct:    6 IHWFRKGLRLHDNPALMAALRDCKELYPLFILDPY-LYDQNLAGINRLRFLISSLQDLDCSLRKLNSRLFVVRGKPEEVLPKLFTKWNVTKLTYEYDTEPYSRSRDKNVTMLAEEQRIQVIYKISHTLYDIDRIIEENNGKPPLTYNRLRDIVKALGSPKKPIPA---------PTVEDMKNIAPFSEKHKPEYGIPSLEELGLDTSSLAEEIFPGGEQEALRRLDTYMQRPGWVCSFEKPNTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLAEVYQGKKHSDPPVSLHGQLLWREFFYTASVGIPNFNKMTGNPACTQVDWDENQEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEKLLLDGDWALNAGNWQWLSASTFFHQFFRVYSPVAFGKKTDKNGDYIKKYLPILKKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPKPIIEHEVISKKNIQRMKQAY-ARRTSGSTESPT 498          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A3Q2CCJ5_CYPVA (Cryptochrome-1-like n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2CCJ5_CYPVA)

HSP 1 Score: 538 bits (1385), Expect = 1.200e-183
Identity = 273/497 (54.93%), Postives = 342/497 (68.81%), Query Frame = 0
Query:   91 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASES 585
            IHWFRKGLRLHDN AL+ A      ++P+F+MD +  S E   G  R  FL+ +L+DLD  LR   SRLFV+RGKPEEV P LF +W + KLT+E D+EP S  RD +V  LA+  G+ V+ + + T+ N+E    +  GK   TY +      KL     P+PA       D+ TP +  D+  Y    IP++ + G+   +   + F GGE+EAL RL+  M +  W+  FEKP+TSPNS+ PSTTVLS Y++ GCLS R FW  L +VY  K  S PPVSL GQLLWREF Y     IPNF+KM GN V  Q+ WD +++ L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G  VF+ELLLD DW++N  NWQWLS SAFF+Q+FR YSP+AFGKKTDKNGDYIKKY+P+L KFPP+YIYEPW AP  VQ+  GCI+GKDYP PIV H  VSK N+ +M +AY A +   +SES
Sbjct:    6 IHWFRKGLRLHDNPALIAALKDCKELYPVFIMDPNLHSTE--VGINRWRFLIGALKDLDSSLRKLNSRLFVLRGKPEEVFPKLFSKWKVTKLTYEYDTEPYSLSRDEKVTSLAKETGIDVIYKISHTLFNIERIIEENDGKPPLTYKRLQAIVAKLGPPKKPIPAPTLDDMKDVKTPCSEKDEKKY---GIPTLEEFGLDSTSLGEELFPGGEQEALRRLDEHMKKTGWVCSFEKPQTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLTEVYRGKKHSDPPVSLHGQLLWREFFYTCSLGIPNFNKMKGNTVCTQVDWDTNQDYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQFFRVYSPIAFGKKTDKNGDYIKKYLPLLEKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPHPIVQHEQVSKKNIQRMKEAY-ARRSTASSES 496          
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A672JPL0_SALFA (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672JPL0_SALFA)

HSP 1 Score: 536 bits (1381), Expect = 7.040e-183
Identity = 270/486 (55.56%), Postives = 341/486 (70.16%), Query Frame = 0
Query:   91 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAY 574
            IHWFRKGLRLHDN ALL A     +++PLF++D D     +  G+ R  FLL +L+DLD  LR   SRLFVV GKPEEV P LF+EWN+ KLT+E D+EP S  RD +V  LA+  GV+V  + + T+ +++    +  GK   TY    G   +L     P+PA       D+ TP +   D   +++ IP++ D+GV   + + + F GGE+EAL RL+  M+R  W+  FEKP+TSPNS+ PSTTVLS Y++ GCLS R FW  L  VY  K  S PPVSL GQLLWREF Y +   IPNF+KMVGN V  Q+ WD + E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G  VF++ LLD DW++N  NWQWLS S FF+Q++R YSPVAFGKKTDK GDYIKKY+P+L+KFP +YIYEPW APL VQR  GCI+G+DYP+PIV+H  +SK N+ +M  AY
Sbjct:    6 IHWFRKGLRLHDNPALLAALRDCKVLYPLFIVDPDC----TYGGNNRKRFLLGALKDLDCSLRKLNSRLFVVTGKPEEVFPKLFKEWNVTKLTYEYDTEPYSLNRDSKVTALAKEHGVEVFYKVSHTLYDMDRIIEENNGKTPLTYKSFQGIVKRLGPPKKPIPAPVLGDMKDVKTPCSEKHD---EKYGIPTLEDVGVDDTSLSEELFPGGEQEALRRLDEHMSRTGWVCNFEKPQTSPNSLSPSTTVLSPYVAFGCLSARTFWWRLSDVYRGKKHSDPPVSLHGQLLWREFFYTASVGIPNFNKMVGNHVCTQVDWDTNAEYLAAWREARTGFPFIDAIMTQLRREGWIHHLARHAVACFLTRGDLWISWEEGQKVFEDYLLDHDWALNAGNWQWLSASTFFHQFYRVYSPVAFGKKTDKRGDYIKKYLPVLKKFPEQYIYEPWKAPLSVQRAAGCIVGQDYPRPIVEHEVISKTNIQRMKQAY 484          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP0_ECTSI0.000e+085.98Cryptochrome 1 n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A835Z8B1_9STRA2.420e-19757.08DNA photolyase n=1 Tax=Tribonema minus TaxID=30337... [more]
F2U6L6_SALR56.690e-18855.49DNA photolyase n=1 Tax=Salpingoeca rosetta (strain... [more]
A0A3B1IHH9_ASTMX3.980e-18754.96Cryptochrome-1-like n=6 Tax=Astyanax mexicanus Tax... [more]
W7TK49_9STRA6.130e-18654.166-4 photolyase n=3 Tax=Monodopsidaceae TaxID=42507... [more]
UPI001955C6E54.710e-18556.44cryptochrome circadian regulator 5 n=1 Tax=Pimepha... [more]
A0A3B4DKP2_PYGNA1.690e-18455.09Cryptochrome-1-like n=6 Tax=Serrasalmidae TaxID=42... [more]
H2MAP7_ORYLA2.980e-18454.96Cryptochrome-1 n=10 Tax=Oryzias TaxID=8089 RepID=H... [more]
A0A3Q2CCJ5_CYPVA1.200e-18354.93Cryptochrome-1-like n=2 Tax=Cyprinodon TaxID=28741... [more]
A0A672JPL0_SALFA7.040e-18355.56Photolyase/cryptochrome alpha/beta domain-containi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005101Cryptochrome/DNA photolyase, FAD-binding domainPFAMPF03441FAD_binding_7coord: 374..571
e-value: 3.3E-77
score: 258.6
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 90..244
e-value: 7.0E-40
score: 136.7
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 88..218
score: 36.556995
NoneNo IPR availableGENE3D1.10.579.10DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3coord: 390..609
e-value: 1.3E-92
score: 311.1
NoneNo IPR availableGENE3D1.25.40.80coord: 216..383
e-value: 5.2E-81
score: 274.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..597
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..613
NoneNo IPR availablePANTHERPTHR11455:SF52CRYPTOCHROME CIRCADIAN REGULATOR 5coord: 89..589
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 91..299
e-value: 5.2E-81
score: 274.6
IPR002081Cryptochrome/DNA photolyase class 1PANTHERPTHR11455CRYPTOCHROMEcoord: 89..589
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 88..263
IPR036134Cryptochrome/DNA photolyase, FAD-binding domain-like superfamilySUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 295..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:8620..17426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.2.2mRNA_P-littoralis_Contig115.2.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 8544..18122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.2.2 ID=prot_P-littoralis_Contig115.2.2|Name=mRNA_P-littoralis_Contig115.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=614bp
MPTREALLGLLLIRPVFSFPRPLWRAPFLQGTFCVRRVGSVTRLPLLSVG
ESIRFGSSHSRATAATAANSPAALSVTASAAMSSSEGPASIHWFRKGLRL
HDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDE
QLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVG
ELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAG
PVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALKFRGG
EREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPR
KFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPV
IRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACF
LTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYS
PVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGK
DYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTDGSAAGGGGSSSS
RGAKPAPKKRAKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005101Cryptochr/Photolyase_FAD-bd
IPR006050DNA_photolyase_N
IPR014729Rossmann-like_a/b/a_fold
IPR002081Cryptochrome/DNA_photolyase_1
IPR036155Crypto/Photolyase_N_sf
IPR036134Crypto/Photolyase_FAD-like_sf