mRNA_P-littoralis_Contig115.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig115.1.1
Unique NamemRNA_P-littoralis_Contig115.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: D7FTE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE5_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 3.170e-144
Identity = 225/395 (56.96%), Postives = 273/395 (69.11%), Query Frame = 1
Query:    1 PPVVLVFEHPTNGSI-IQGTNAELQFTLRSSRSGPALTRDEVTILREDGASICFAVQKVFTKEPTLCTELTTEI-LSVGGLLPGAWHTITATLHHTTVSGIGLSEVKRILEDVSAKWDRAGDSVTMLVAIDSSSTT-----CGDSVCLDSSDVRATYFDNLYREGHWGDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAALDTDDKHMGLWEIDPVRPLVVLNGKC 1164
            PP VLVFE P+NGS  + GTN +L F+LRSSR G  LT +E+  LREDG S+C A  K     P  C  L+T+  LS+   LPG WHTI ATLHH   +  G         D +  W  AGDSV+    I+  S+T     CG+S CLDSS+ R+ YFDN+YR  +W +TRSGPGSTV +T  +RLA+EEVIR H V S+LDAPCGD TWMPLVRGID+VRY GADIS SIV +NRRKF   Q++    G+       E  A   AGG     F+QADLVE +PPS+ G+PYDLIFVRDVMLHLAPRHN+++L+NIE SGAR  MAST ++G+DNW+ADTF PAIG  +NLSLPPYCLRPP+AL+SDA  +   + MGLWE+DP RPLV  NG C
Sbjct:   51 PPAVLVFESPSNGSAAVYGTNIDLAFSLRSSREGRILTHEEIEALREDGVSVCLA--KKGDPRPPPCALLSTDTTLSLHKPLPGMWHTIVATLHHEAATSAGDDS------DEARAWAEAGDSVSTYAEIEGLSSTSSVSMCGESACLDSSEKRSAYFDNVYRMEYWAETRSGPGSTVHNTNRIRLALEEVIRSHGVTSILDAPCGDATWMPLVRGIDQVRYLGADISPSIVEDNRRKFSKLQDHSGGSGD-------EAVASANAGGLHEDSFIQADLVERIPPSMDGKPYDLIFVRDVMLHLAPRHNVRMLQNIEASGARFLMASTNVDGNDNWKADTFRPAIGLLVNLSLPPYCLRPPIALYSDAMPERPGQRMGLWELDPARPLVGSNGLC 430          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A6H5JDW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW5_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 2.900e-94
Identity = 147/247 (59.51%), Postives = 180/247 (72.87%), Query Frame = 1
Query:  439 RATYFDNLY--REGHWGDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAALDTDDKHMGLWEIDPVRPLVVLNGKCRQV 1173
            RAT     Y  R  +W +TRSGPGSTV +T  +RLA+EEVIR + V S+LDAPCGD TWMPLVRGID+VRY G DIS S+V +NRRKF   Q++    G+       E  A   AGG  GA F+QADLVE +PPS+ G+PYDLIF+RDVMLHLA +HN+Q+L+NIE SGAR  MAST ++G+DNW+ADTF PA G  +NLSLPPYCLRPP+AL+SDA  +   + MGLWE+DP RPLV  N  C  +
Sbjct:   37 RATSLQLFYLSRMEYWAETRSGPGSTVHNTNRIRLALEEVIRSNGVTSILDAPCGDATWMPLVRGIDQVRYLGVDISPSVVEDNRRKFSKLQDHSGGSGD-------EAVASASAGGLHGASFIQADLVERIPPSMDGKPYDLIFLRDVMLHLARQHNVQMLQNIEASGARFLMASTNVDGNDNWKADTFRPADGLLVNLSLPPYCLRPPIALYSDAIPERPGQRMGLWELDPARPLVGSNELCDHI 276          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A6H5K573_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K573_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 5.230e-81
Identity = 156/396 (39.39%), Postives = 218/396 (55.05%), Query Frame = 1
Query:    4 PVVLVFEHPTNGSIIQGTNAELQFTLRSSRSGPALTRDEVTILREDGASICFAVQKVFTKEPTLCTELTTEILSVGGLLPGAWHTITATLHHTTVSGI-GLSEVKRILEDVSAKWDRAGDSVTMLVAIDSSSTTCGDSVCLDSSDVRATYFDNLYREGHW-GDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHD-------ALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAALDTDDKHMGLWEIDPVRPLVVLNGKC 1164
            P+ L F  P NG+ ++G N  L + + ++     LT  EV  L     ++CF +   F   P +C  L    +++   LP  WH +T ++  T+   + GLS+       VS   +  G  V  +         CG+S CLDS+ +R+ YFD +YR   W G       S + ST  +R  + +VI    + SMLDAPCGDL+WMPLV GI  V+Y GADI    V  NR+KF         G + T  R+ +         A+RR  G +   FV ADLVESVP S  G P+DL+FVRD+M+HL  RHNL++++NI+ SGAR  MASTY+   +N  ++TF+P +GH INLSLPPYCL  P+A+F D +    D  MGLW++    PL  L+G C
Sbjct:   55 PLHLGFTSPINGTRVEGPNVFLHYKIFNTLENRELTSAEVRDLSVS-TTVCFKLHG-FNDVPEICAPLRVATVTIKDALPAKWHHVTGSIKDTSTGKLLGLSD-----GGVSVFNNLNGYGVLDM---------CGESACLDSNALRSAYFDYVYRHPSWYGRIPLTGASKLSSTFSIRSGLSKVISAFNIKSMLDAPCGDLSWMPLVSGIQNVQYTGADIVEIAVETNRKKF---------GADITEIRDEDLKVGREIAAAMRRGEGLKDPAFVVADLVESVPASQDGAPFDLVFVRDLMVHLPARHNLKVIQNIQASGARFLMASTYVEADENKLSETFVPPMGHNINLSLPPYCLPEPMAVFLDDSTKRTDLRMGLWDLHEHSPLA-LSGDC 424          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A6H5JG86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG86_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.320e-34
Identity = 79/165 (47.88%), Postives = 98/165 (59.39%), Query Frame = 1
Query:    1 PPVVLVFEHPTNGSI-IQGTNAELQFTLRSSRSGPALTRDEVTILREDGASICFAVQKVFTKEPTLCTELTTEI-LSVGGLLPGAWHTITATLHHTTVSGIGLSEVKRILEDVSAKWDRAGDSVTMLVAIDSSSTT-----CGDSVCLDSSDVRATYFDNLYREG 474
            PP VLVFE P+NGS  + GTN    F+LRSSR G  LT +E+  LREDG S+C A  K   + P LC  L+T+  LS+   LPG WHTI ATLHH   +  G         D +  W  AGDSV+    I+  S+T     CG+S CLDSS+ R+ YFDN+YR G
Sbjct:   50 PPAVLVFESPSNGSAAVYGTNMNFAFSLRSSREGRILTHEEIEALREDGVSVCLA--KKGDRRPPLCALLSTDTTLSLHKPLPGMWHTIVATLHHKAATNAGDDS------DEARAWAEAGDSVSTYAEIEGLSSTSSVSMCGESACLDSSEKRSAYFDNVYRSG 206          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A2D5ZFN1_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5ZFN1_9BACT)

HSP 1 Score: 105 bits (262), Expect = 5.920e-23
Identity = 77/234 (32.91%), Postives = 109/234 (46.58%), Query Frame = 1
Query:  451 FDNLYREGHWGDTRS--GPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAALDTD----DKHMGLWEIDPV 1134
            F  +Y    WG T S  G GS +  T  +  A+ +++R+ RV SMLD PCGD  WM  V  +D VRY GADI  ++++ENRR          +  E            RR+       FV  DL     P+      DL+F RD  +HL  R  L+ L NI  SGA   + +T+     N +  T        +NL+ PP+ L PPL L  +   +      DK +GLW++  +
Sbjct:   15 FTGIYERNLWGSTESDSGTGSELERTRAIAEALPDLLRELRVTSMLDIPCGDFHWMSRV-DLDAVRYIGADIVRTLIDENRR----------FADE------------RRS-------FVHLDLTCDPLPAA-----DLVFCRDCFVHLCDRDVLRALDNIRRSGATWLLTTTFTRRRRNVDIKT---GGWRTLNLTRPPFDLPPPLRLIDERCTEGGGQFVDKSVGLWKVGEI 210          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: UPI000F4EC0BA (class I SAM-dependent methyltransferase n=1 Tax=Flavobacterium covae TaxID=2906076 RepID=UPI000F4EC0BA)

HSP 1 Score: 104 bits (260), Expect = 1.160e-22
Identity = 68/224 (30.36%), Postives = 109/224 (48.66%), Query Frame = 1
Query:  439 RATYFDNLYREGHWGDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAALDTDDKHM 1110
            R  Y ++ +   + G +RSGPGS +  T  +R  +E +I D+ + S+LD PCGD  WM  V  +  V+Y GADI  S++N N +K+   QNN                            F   DL+    PSV     DLI VRD+ +HL  +  L+ + NI+ SG++  + +++L    N   D  I +    +NL L P+ L  PL + ++   + + K++
Sbjct:   13 RKIYENDGFNMMNRGVSRSGPGSDLVQTKIIREEIERIINDYEINSILDIPCGDFYWMSRV-SLKNVKYIGADIVKSLINNNIKKYKTEQNN----------------------------FKTIDLISDKLPSV-----DLIIVRDLFVHLKNKQILRSIENIKNSGSKYLLVTSFLRNEKN--KDIEIVSQWRPLNLMLDPFNLPKPLEIINENCTEGERKYL 200          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A7S4A599_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A599_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.840e-21
Identity = 72/239 (30.13%), Postives = 108/239 (45.19%), Query Frame = 1
Query:  439 RATYFDNLYREGHW-------GDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLV--RGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADT-FIPAIGHFINLSLPPYCLRPPLALFSDAALDTDDKHMGLWEI 1125
            R++YF  +Y  G+W       G   SGPGST+ +       +E++IR+  +  ++DAPCGD+TWM  V  RG++   Y G D+  S++  N  K P                            F          V+ +   V G    LI  R ++ HL       +LR++  SGA   + STY+   D    DT ++ A GH  NL   PYC R P  L+ DA  D   +++GLW++
Sbjct:  129 RSSYFSTVYELGYWAAQHKMPGVPASGPGSTLDAAKNAITTIEQLIREFDIELLIDAPCGDMTWMASVDLRGVE---YVGIDVVQSVIASNIEKHPSLT-------------------------FMALDVADESSVDQLRSLVRGRR-TLILCRHLLFHLPVGDGRAVLRHLHGSGASYLLTSTYVKADD---FDTSYVLANGHRTNLLKRPYCARDPSRLYLDAHAD---QYLGLWDL 332          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A2S8K9K3_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium SEEP-SAG9 TaxID=2100161 RepID=A0A2S8K9K3_9DELT)

HSP 1 Score: 93.2 bits (230), Expect = 2.290e-18
Identity = 60/229 (26.20%), Postives = 108/229 (47.16%), Query Frame = 1
Query:  451 FDNLYREGHWG--DTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAALDTD----DKHMGLW 1119
            F N+Y++  +   ++RSG GS +  T  +R  +  +I++ ++ S++DAPCGD  WM  V  +   RY G DI   IV  N++K+                            G Q  +F + +++E V P       D+I  RD ++HL+ R  +Q++ N + SGA+  + +T++N   N +           IN+  PP+    P+ +  +   + +    DK +GL+
Sbjct:   21 FTNVYQKNLFKGKESRSGEGSNMTQTTIIRREIPLLIKELKIKSLIDAPCGDFFWMREVE-LPVERYIGVDIVKDIVENNQKKY----------------------------GNQQRIFRELNIIEDVMPMT-----DMILCRDCLVHLSFRQGIQVINNFKKSGAKYLLTTTFVNRLSNHDLGK---GFWRTINIERPPFNFPKPINIIDEKCTELNGEYTDKSLGLF 212          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A2N1UM43_9BACT (Uncharacterized protein n=1 Tax=Nitrospira bacterium HGW-Nitrospira-1 TaxID=2013825 RepID=A0A2N1UM43_9BACT)

HSP 1 Score: 90.1 bits (222), Expect = 3.050e-17
Identity = 62/235 (26.38%), Postives = 110/235 (46.81%), Query Frame = 1
Query:  451 FDNLYREGHWG--DTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPA-IGHFINLSLPPYCLRPPLALFSDAALDTDD----KHMGLWEIDPV 1134
            F  +Y +  +G  ++RSG GS +  T+ +R  + +++R+ ++ + +DAPCGD  WM     ++  +Y G DI   ++ +NR++F                            G  G  F+  +L E   P V     DLIF RD ++HL  R   +I+ N + S ++  + +T+   +D    D    A     +NL LPP+    PL L ++   + +D    K +GLW ++ +
Sbjct:   25 FSKIYSKNIFGGKESRSGEGSNLIQTLEIRRELPKLVRELKIKTFMDAPCGDWYWMRQT-SLEVEKYIGVDIVDELIEKNRKQF----------------------------GTDGREFMCLNLAEDQLPQV-----DLIFCRDCLVHLDYRDIDKIIANFKRSKSKYLLTTTF---TDKKNVDLVGEASFFRALNLELPPFNFPKPLKLINEKCTEENDQYTDKSLGLWRLEDI 222          
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Match: A0A3M1QPQ1_9CHLR (Class I SAM-dependent methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1QPQ1_9CHLR)

HSP 1 Score: 90.1 bits (222), Expect = 4.360e-17
Identity = 70/241 (29.05%), Postives = 112/241 (46.47%), Query Frame = 1
Query:  415 VCLDSSDVRATYFDNLYREGHW--GDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGDLTWMPLVR-GIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTREREHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPRHNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYCLRPPLALFSDAAL-DTDDKHMGLWEI 1125
            +CL     R  ++  +Y    W   ++RSG GS +  T  +R  +  ++R+    S LD PCGD  WM  V  G+D   Y G DI   IV  NRR++     NE W               RR        F   D+  S  P V     D++F RD+ +HL+    L+ L N++ S ++  + +T+ +   N +  T    +   INL  PP+ L PPL + ++ +  +  D+ +G+W+I
Sbjct:   37 LCLRLLPARFIFY-LIYHRNIWQGAESRSGTGSDLHRTEKLRAILPGIVRELDAKSFLDIPCGDFNWMQAVDLGVDL--YIGGDILRVIVEHNRRQYA----NE-W---------------RR--------FAVLDITSSPLPQV-----DIVFCRDLFIHLSNADVLRALENVKRSQSQYLITTTFPSQPHNTDIPT---GLYRAINLERPPFALPPPLQVIAEESFAELPDRSLGIWKI 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTE5_ECTSI3.170e-14456.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDW5_9PHAE2.900e-9459.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K573_9PHAE5.230e-8139.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JG86_9PHAE5.320e-3447.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D5ZFN1_9BACT5.920e-2332.91Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]
UPI000F4EC0BA1.160e-2230.36class I SAM-dependent methyltransferase n=1 Tax=Fl... [more]
A0A7S4A599_9STRA2.840e-2130.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2S8K9K3_9DELT2.290e-1826.20Uncharacterized protein n=1 Tax=Desulfobacteraceae... [more]
A0A2N1UM43_9BACT3.050e-1726.38Uncharacterized protein n=1 Tax=Nitrospira bacteri... [more]
A0A3M1QPQ1_9CHLR4.360e-1729.05Class I SAM-dependent methyltransferase n=1 Tax=Ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:4831..8172 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FTE5
PFAMsMethyltransf_25
Model size1185
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.19e-145
EggNOG OGs2E0VG@1|root,2S88X@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-21_001050.1
Cds size1185
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789468.2033634-CDS-P-littoralis_Contig115:4830..51431680789468.2033634-CDS-P-littoralis_Contig115:4830..5143Pylaiella littoralis U1_48CDSP-littoralis_Contig115 4831..5143 -
1680789468.2202518-CDS-P-littoralis_Contig115:5477..58821680789468.2202518-CDS-P-littoralis_Contig115:5477..5882Pylaiella littoralis U1_48CDSP-littoralis_Contig115 5478..5882 -
1680789468.2337415-CDS-P-littoralis_Contig115:7705..81721680789468.2337415-CDS-P-littoralis_Contig115:7705..8172Pylaiella littoralis U1_48CDSP-littoralis_Contig115 7706..8172 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.1.1prot_P-littoralis_Contig115.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig115 4831..8172 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig115.1.1

>prot_P-littoralis_Contig115.1.1 ID=prot_P-littoralis_Contig115.1.1|Name=mRNA_P-littoralis_Contig115.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=395bp
PPVVLVFEHPTNGSIIQGTNAELQFTLRSSRSGPALTRDEVTILREDGAS
ICFAVQKVFTKEPTLCTELTTEILSVGGLLPGAWHTITATLHHTTVSGIG
LSEVKRILEDVSAKWDRAGDSVTMLVAIDSSSTTCGDSVCLDSSDVRATY
FDNLYREGHWGDTRSGPGSTVPSTIGVRLAVEEVIRDHRVPSMLDAPCGD
LTWMPLVRGIDRVRYAGADISTSIVNENRRKFPPPQNNERWGGEATTTRE
REHDALRRAGGFQGAVFVQADLVESVPPSVYGEPYDLIFVRDVMLHLAPR
HNLQILRNIETSGARLFMASTYLNGSDNWEADTFIPAIGHFINLSLPPYC
LRPPLALFSDAALDTDDKHMGLWEIDPVRPLVVLNGKCRQVVWD*
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mRNA from alignment at P-littoralis_Contig115:4831..8172-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig115.1.1 ID=mRNA_P-littoralis_Contig115.1.1|Name=mRNA_P-littoralis_Contig115.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3342bp|location=Sequence derived from alignment at P-littoralis_Contig115:4831..8172- (Pylaiella littoralis U1_48)
CCCCCCGTTGTTTTAGTTTTCGAGCACCCCACGAACGGATCCATCATCCA AGGAACAAACGCCGAGCTGCAATTCACGCTGAGATCCTCACGGTCAGGCC CCGCATTAACACGAGATGAGGTTACGATCCTCCGGGAAGACGGTGCGTCC ATCTGCTTCGCAGTTCAGAAGGTGTTTACCAAAGAGCCGACTCTCTGCAC CGAGTTGACCACGGAGATCCTGTCCGTAGGTGGGCTTCTGCCTGGAGCCT GGCACACGATTACGGCGACTCTCCACCACACAACAGTCTCAGGGATAGGA CTTTCTGAGGTTAAAAGGATACTGGAGGACGTCAGTGCCAAGTGGGACCG TGCTGGCGACAGCGTGACGATGCTTGTGGCGATTGACAGCAGCTCCACGA CGTGCGGAGACAGCGTCTGCCTGGACAGCAGCGATGTCCGTGCCACCTAC TTTGACAACTTGTACAGGTGACATGTGAGTTTAAAACTTACTGTACGCCT GAACTTACCTAAGATACACGTATCGAATCGACGCCGGTCAGAGCATTGTT TATGACCGCGCCACCTACTTTGACAACGTGTACAGGTGACATACGAGTCT AAAACCTTGCTATACGCCTGAACTTGCCTAGGATACACGCATCGAACCGA CGCTGGTCAGGGCGTTTTTTATGAAGGTGTCCCCGTTTTTTCTAGAAAGA TAATCTCACATGCACCTCCAACCGGTCGCCCCGGTGGTCAAGTGGTTCCT TCGTTAACCCACTAGTTGTCAGGTCGAATGGCATAGGTTCGGTTCTCTCT GAGAACGTTTCTTGCGACTTTACAGTGGAAATCGAATTACACGTGAGTAA ACAGAGGGAAGGGATTGCTGTACCCGACTCGCATTAAAAACCAAAGGCAC GTACCGCAAGAGGAAGGTTTGGGCAATCAAACAAAATATAAAACAAAAAA ACTCGTGCGTGACCTTCCTTCTGGGTGACCCCGGCTGATGCACCCACTTC ATACCGAAAGGTTTAGACTGGTGCCCAGAATAAATGGGAGGACAAAACAC ACATACATACACACCTCCACCGTTTGGGTTGAATTGGCGCCTGTTCTTCG CACTTCTGAAATGGCGTGCTGATAGGAGACCTACTCTTGGCCTTGATCAA CGTGGATATAAAATCCACTTGGACTGGGCACGGAGCCGTATAATTGAGCA GCATGGCAGCACAGCGGCCAACTTGCACGGGAGGGCTGACAGAGGGTGTT CGCGGTGCAAGGGTATTTCGTATGCCGAGTGTTCTTACGACACAAGGAAA TCACTTTTTGTGGACTACTGCTGAAAAGCTGGATCTTACGCCCGACTGAT TTCGGGACAATCATGAACCCCATGTTATAGAACACCCGGATTTTGGGCCC GGTTTTGCAGTGTCCTCAGAAGCGTATCCCAACCGGGGCATTTGTTTTGC AAACGAGTAGAGAAATACACACGCAACACACCATTGATTGGTTGGACCGA CCACCGAAAACACGCTGACACAGAGCAGGCCATCATGCCGAGGAAATCAC CGCCTCTCGATGTGAACTCAGCCTTGCATTGGGTACTATAGACACAATAC AACTCACTGCTGTCTATCTGGCAACAGCAGCAGCAGAGAGGACTGCTGGC TGCTGTTGCCACAAGATCAAAGAGCTACGCATACCCTTCACTCACGATAC GCGGAGGTCGATGCTTACCAAGCAACAGTAGTCACCTCTGCTTGTTTTTT AAGACAGTCAGTCTACGCTCGAACCGGGCTTCATCGCGGGTTAGGTGGGG GATTGTAGTTGTGGTTGTTGTAATGTTGCGGGCTCGGTACGATCGCAAAC AATAAAACAACACAAAATCCGTGGGATTCGCTCTCCAATTGTTGTCCTCG TATTTTAAGGCCGTTAATTCGAAAAATCCGCGCCCATAGGTGAGATGGAT TAAGATTGATCTCGACGAATTTGAAAGATCCGTGTCTCAAAATCCGTGCC CATATGGTCCAGCCTAAGCGAGCCGGTGAAACCTTATACCGACCACCATA AAGACATTTAATGCTTAACCGTAAAATAGTCACCGCAAGTACCCGGTATC CATCACAAAGACTAAACTCGGAACCCTGGAGTCCGCTGGATCTTACTCTT CGTGGAAAGTGGAGTTTAATTTTACATGTTTTGGACAGCAGTGCTATGAC ACACCACATGCCAAGAACAACAAAATTCAAGATCACTGTGCTATGTACGT GTTGCTCCTGTTTGTCAACTGTCGTTTCTGAAATACTTAGGGAAGGTCAC TGGGGTGATACTCGCAGCGGCCCTGGCTCAACAGTGCCAAGCACGATTGG AGTACGGCTAGCCGTGGAAGAAGTGATTCGCGATCATAGAGTACCCAGCA TGCTCGATGCTCCCTGCGGAGATCTCACCTGGATGCCTCTTGTTCGTGGA ATCGATCGAGTTCGGTACGCCGGAGCTGATATCTCAACTAGCATTGTGAA CGAAAATCGGCGCAAGTTCCCCCCTCCGCAGAATAACGAACGTTGGGGGG GAGAAGCGACGACCACTCGAGAACGAGAACACGACGCGTTACGAAGAGCC GGGGGCTTCCAAGGAGCTGTGTTTGTGCAAGCTGACCTAGTAGAGAGTGT CCCGCCCTCGGTGTATGGGGAACCATATGACCTCATTTTCGTCAGGTCAG TCGCAAAACAACTCATAGACTGCATGGCGTATGGCAGCCCTTGGATTGGT AAACTTGATGCTGCTGCCACAAAATGTGCAACATGAGGCCATCCGCGCGT GGACAAAAATCGATAGCGCCACAATACGCAATATTACTTCCCCTTTTCCA GCTTTCTAGGTATTGGGGGCTAGTCCAGCATTGAAGCCGAGGATCATGAC AAAAGTTACACCAGTCCGGAGAGTCACACTCGTGAGCTGCCAGGGTCAGT CTCGGCCGAATTCTATCACAATCGCCTGGTCGTCTCTCCCTTCTTACCAT ATCCGATTGTGTTGTCGCTTGTTTCACAGGGACGTCATGCTCCACCTCGC CCCTCGGCACAATCTCCAAATTCTTCGGAATATTGAGACCAGTGGTGCGC GATTATTCATGGCGAGTACCTACCTCAATGGCAGTGATAATTGGGAGGCT GATACCTTCATTCCGGCGATTGGGCACTTCATTAATTTGTCTCTACCGCC GTACTGCTTGCGGCCACCGCTTGCTCTTTTCTCGGACGCCGCTTTGGATA CAGATGACAAGCATATGGGGCTGTGGGAGATTGATCCCGTCAGACCACTT GTGGTCTTGAACGGGAAGTGTCGCCAGGTAGTCTGGGACTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig115:4831..8172-

>mRNA_P-littoralis_Contig115.1.1 ID=mRNA_P-littoralis_Contig115.1.1|Name=mRNA_P-littoralis_Contig115.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1185bp|location=Sequence derived from alignment at P-littoralis_Contig115:4831..8172- (Pylaiella littoralis U1_48)
CCCCCCGTTGTTTTAGTTTTCGAGCACCCCACGAACGGATCCATCATCCA
AGGAACAAACGCCGAGCTGCAATTCACGCTGAGATCCTCACGGTCAGGCC
CCGCATTAACACGAGATGAGGTTACGATCCTCCGGGAAGACGGTGCGTCC
ATCTGCTTCGCAGTTCAGAAGGTGTTTACCAAAGAGCCGACTCTCTGCAC
CGAGTTGACCACGGAGATCCTGTCCGTAGGTGGGCTTCTGCCTGGAGCCT
GGCACACGATTACGGCGACTCTCCACCACACAACAGTCTCAGGGATAGGA
CTTTCTGAGGTTAAAAGGATACTGGAGGACGTCAGTGCCAAGTGGGACCG
TGCTGGCGACAGCGTGACGATGCTTGTGGCGATTGACAGCAGCTCCACGA
CGTGCGGAGACAGCGTCTGCCTGGACAGCAGCGATGTCCGTGCCACCTAC
TTTGACAACTTGTACAGGGAAGGTCACTGGGGTGATACTCGCAGCGGCCC
TGGCTCAACAGTGCCAAGCACGATTGGAGTACGGCTAGCCGTGGAAGAAG
TGATTCGCGATCATAGAGTACCCAGCATGCTCGATGCTCCCTGCGGAGAT
CTCACCTGGATGCCTCTTGTTCGTGGAATCGATCGAGTTCGGTACGCCGG
AGCTGATATCTCAACTAGCATTGTGAACGAAAATCGGCGCAAGTTCCCCC
CTCCGCAGAATAACGAACGTTGGGGGGGAGAAGCGACGACCACTCGAGAA
CGAGAACACGACGCGTTACGAAGAGCCGGGGGCTTCCAAGGAGCTGTGTT
TGTGCAAGCTGACCTAGTAGAGAGTGTCCCGCCCTCGGTGTATGGGGAAC
CATATGACCTCATTTTCGTCAGGGACGTCATGCTCCACCTCGCCCCTCGG
CACAATCTCCAAATTCTTCGGAATATTGAGACCAGTGGTGCGCGATTATT
CATGGCGAGTACCTACCTCAATGGCAGTGATAATTGGGAGGCTGATACCT
TCATTCCGGCGATTGGGCACTTCATTAATTTGTCTCTACCGCCGTACTGC
TTGCGGCCACCGCTTGCTCTTTTCTCGGACGCCGCTTTGGATACAGATGA
CAAGCATATGGGGCTGTGGGAGATTGATCCCGTCAGACCACTTGTGGTCT
TGAACGGGAAGTGTCGCCAGGTAGTCTGGGACTGA
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