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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 437 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 435 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789466.275484-CDS-P-littoralis_Contig1141:11095..11280 | 1680789466.275484-CDS-P-littoralis_Contig1141:11095..11280 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1141 11096..11280 + |
| 1680789466.2865195-CDS-P-littoralis_Contig1141:14042..14103 | 1680789466.2865195-CDS-P-littoralis_Contig1141:14042..14103 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1141 14043..14103 + |
| 1680789466.2985792-CDS-P-littoralis_Contig1141:14443..14519 | 1680789466.2985792-CDS-P-littoralis_Contig1141:14443..14519 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1141 14444..14519 + |
| 1680789466.3098717-CDS-P-littoralis_Contig1141:19593..19706 | 1680789466.3098717-CDS-P-littoralis_Contig1141:19593..19706 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1141 19594..19706 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1141.3.1 >prot_P-littoralis_Contig1141.3.1 ID=prot_P-littoralis_Contig1141.3.1|Name=mRNA_P-littoralis_Contig1141.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=145bp
HERGCLDLRQSPVESNVQPWFLSAAKRDGGEAAAIIATQTFSLDVAAAAA
TTLLITILLHHWRNTRVLGSWTEGMTRNCRDQAFFTLAEHQGFGLMDGGD
DQKLQKPGIAVAVAGGSTAVGPMLLATLPCSGAGRGRIGWKFLGL back to topmRNA from alignment at P-littoralis_Contig1141:11096..19706+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1141.3.1 ID=mRNA_P-littoralis_Contig1141.3.1|Name=mRNA_P-littoralis_Contig1141.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8611bp|location=Sequence derived from alignment at P-littoralis_Contig1141:11096..19706+ (Pylaiella littoralis U1_48)
CATGAGCGTGGCTGCCTGGACCTTCGTCAGTCACCCGTCGAGAGCAATGT
TCAACCTTGGTTTCTATCCGCTGCCAAAAGAGACGGGGGAGAAGCAGCAG
CAATAATAGCAACGCAGACCTTCAGCCTGGATGTCGCTGCCGCTGCCGCC
ACTACGCTTCTGATCACAATACTGCTGCATCATTGGTGAGATGAGAGCGG
GTGGGGAGACAGGATGCTCACGAAAGCTCTGCTTGGATATTCTGTATGGT
TGCCTTCTTTGTGCGTCGTTCAATGCAACAAGTACGTACACGTATCGTAT
CGTACAAGACTTGTAACTTGATTTACTTCTACTGACTCTACTGTACTTTA
CTCAATGTCTTGAAATGCTCCGTCTATAAAACAACCTCAACAGCAGGAGC
AACAGCAGCAACAGCAGCAGTGCCAACTGCTGCAGTGTCCCCACCACATC
TGCACATATCGCAACAACGGCAGCACTGTATCCATCACATGAGTACATGT
AGGTAGTGTGTGTATCAGTGTGTTCACATGACACTCCATCCCTTCCGGAC
GCCGGTCTACACCTTTCGGCACGGAGTATGTACATTTTTGTCGGACCGCC
TACGCCAGGATGTTAAACAAACATAAGGATAAAGTATACTTTTGGCTAAG
TTTAATCCCGCCGCCTGTTTTTGGGGGAGTTGTGGAATCCATATTGGCCT
TGGTTTTGGAGAATAAACGGGGTAAAAGTCCTAGCAGCCCCGAAAACAGG
GGATATTGTCACAGCAACCCCGAAACCGTCGCGGTTGCTGGCTCCTCACA
CGCGGCTTGCCGTTGGCTTTTACTGCTGTCGTGCTGCTGCTGCTACTGCT
GTACGCTGCTGATGTTGGGTGTTGCTTTTGTGTAGAGGGTATGTGATGGC
TGAGGGTAGCAAAACTCTTTCACTACACTGCTGCAATGCGTCCGAGAAGA
ACAGATTATGCTCAGCATCCAACCTGCGTGCGCATCGGTCGACCTACTAC
TGCTGCTGTAGGACGACCGGCAGATCCTACAGCGACCGACCCAAAGCTCT
CTCGTTGCGCGAGGCGAGGCGAGGGTAGGCAAGCGCGACTTGATTGACGT
AGTGTAGCTGATGTCCCTGAGACAGCTCGAAGTGTGGTTGTTTGTCAGTC
AGCAGTTAACAACATACAGCAGCTGCAGCATACACACTCGAACGAACGCT
GACGGTGTATACCACACCCCCTGGATCAATTAATTTCGAACGCTTGCACG
ACATGTTCTCAGCAGGATAAGTGCCGGCGTGCAAATCAGGTCGCTGTAGG
AACCATATGTCATATCGTGGAGAGGTTTCCGAAAACGTATCGAGCACCGA
TCTTGGTGGAGTTCGTTGTAGAGTACAGCAGTAACGTATATTTTGAAACC
ACTCCAGAGGTGGGTGTGAGAAATACCCCAGGACAACAACAAACAGCAAT
ACCAACGGTACAGACGGCGCATCTGCGTCGCATATCGCAGCTTGGAACAC
CATTCCTCTACTTGACCGGGGGAGGGGATATTGGAGGGAGGGGGGGGTAA
TGGTGGGGGCTGATTGGACGTGACTTGAAAACTTCTTGCGCCAACTCATG
TACTCGTACTCCGTACCTGTACTCGTCCTGGTATATTTTCCCAATCAGGC
GTTGATTTTGTCCCGGCGGAACACCAGGGTTTGGCACCAGGGTTTGGCAC
TCATGAACGGAGGAAATGACCAGAAACTACGGCGTAAACCAAGCGTTAAT
GTGCTTCTCATGCCCATGCGTGGCCCGGGAACAACAATCACACACCGCCT
TCGCTTCCACAAGTTCCGATGTCATTGTTCGACCCTCTTCACCCTATCCA
AAACCTTATCCCTTAGCGAACATGTTATGAATCTTGTGCCTCGCCCCCAA
TACAACGTTTTTTCACGAAAACACGTGCTTCTTTCGGGAAACAAGGCATT
GGGGTCATCGATACACATGTTAGATACACATGTTATACAGAGGGTGGGAA
CCTCAAACAGATATTACACGACTCGGGTGGCTCATCGGACGTCAGGTGAA
AACTTCTGGCACCAACTTTGAAAAAACTCAATTCCACCAGGCGTTGTTTT
ACCCTGGCGGAACACCAGGATGTGGCACTCATGAACGGAGGGGATGACCA
GAAACTGCAGAAACCAAGTATTTTTGCGTTATGCATGTCCATGTGCGGCC
CAGGAACAACAATCACACACCGTCTGGGAATAGACATGTGACTATACCAT
TCTTTGGCCCTGCTCACCGCACCCTAAACCTTACCCCTCAGTGAACATGT
TATGAATTTTGTACCTCGACCCCAATACAACGTTTTTTCACGAAAACATA
TGCTTCTTTCGAAAAAAGGACGTTGCGTTGATCGATGCACATGTTGTACA
GAGGGTGGGAACCTCAAATATGCAATACACGACCCTGGTAGCCCCATCGG
CCATCATATGAAAATTTCTGGCAGCAACTTTGAAAAAAATAATTTCGACC
AGGCGTTGTTTACCCTGGCGGAACACCAGGCAGGGTTTTGGGCTCATGGA
CGGAGGGGATGACCAGAAACTGCAGAGACCAGGTATTTTCGTGCTTCCCA
TGCCCATATGCGGCCCAGGAACAACAATCACACACCGTCTGGGAATAGAC
ATGTGACTATACCATTCTTCGGCCCTGCCCTGCTCACCGCACCCTCAACC
TTACCCCTTAGCGAACATGTTATGAATCTTGTACCTCGACCCCAATACAA
CGTTTTTTCACCAAAACATATGCTTCTTTCGGAAAAAGGGCGTTGCGTTG
ATCGATACACGTATGTTATACAGAGGGTGAGAGCCTCGAATGAATATACA
ATACACGACCCTGGTGGCCCCATCGATCATCATATGAAAACTTCTGGCAC
CAACTTTGAAACAACTAATTTCCACCAGGCGTTGTTTTACCCTCCAGGCG
GAACACCAGGGTTTTGGGCTCATGGACGGAGGGGATGACCAGAAACTGCA
GAGACCAGGTATTTTCGTGCTTCCCATGCCCATATGCGGCCCAGGAACAA
CAATCACACACCGTTTTGGCTTATACAAATGTTTATACCATTCTTCGGCC
CTGCCTTGCTCACCGCACCCTCAACCGTACCCCTCAGCGAACATGTTATG
AATCTTGTACCTCGACCCCAATACAACGTTCTTTCACGAAAACACGTGCT
TCTTTCGGAAAAATAGGGTTGTGTTGATCGATGCACATGATATACAGAGG
GTGGGAGCCTCAAATATACAATACACGACCCTGGTGGCCCCATCGGCTAT
CATATGAAAACTTCTGGCACCAACTTTGAAACAACTAATTTCCACCAGGC
GTTTTTTACCCTGGCGGAACACCAGGGTTTTGGGCTCATGGACGGAGGGG
ATGACCAGAAACTGCAGAAACCAGGTATTTTCGTGCTCCCCATGCCCATA
TGCGGCCCAGGAACAACAATCACACACCGTTTTGGCTTATACAAGTGTTT
ATACCATTCTTCGGCCCTGCCCTGCTCACCGCACCCTCAACCGTACCCCT
CAGCGAACATGTTATGAATCTTGTACCTCGACCCCAATACAACGTTCTTT
CACGAAAACACGTGCTTCTTTCGGAAAAATAGGGTTGTGTTGATCGATAC
ACGTATGTTATACAGAGGGTGAGAGCCTCAAATATACAATACACGACCCT
GGTGGCCCCATCGGTCATCATATGAAAACTTCTGGCACCAACTTTGAAAC
AACTAATTTCCACCAGGCGTTGTTTTACCCTCCTGGGGGAACACCAGGGT
TTTGGGCTCATGGACGGAGGGGATGGCCAGAAACTGCAGAAACCAGGTAT
TTTCGTGCTCCCCATGCCCATATGTGGCCCAGGAACAACAATCACACACC
GTTTTGGCTTGTACAAGTGTTTATACCATTCTTCGGCCCTGCCTTGCTCA
CCGCACCCCCAACCGTACCCCTCAGCGAACATGTTATGAATCTTGTACCT
CGACCCCAATACAACGTTTTTTCACGAAAACACATGCTTCTTTCGGAAAA
ATAGGGTTGTGTTGATCGATGCACGTAATATACAGAGGGTGAGAGCCTCA
AATATACAATACACGACCCTGGTGGCCCCATCGGTCATCATATGAAAACT
TCTGGCACCAACTTTGAAACAACTATTTTCCACCAGGCGTTTTTTACCCT
GGCGGAACACCAGGGTTTTGGGCTCATGGACGGAGGGGATGACCAGAAAC
TGCAGAAACCAGGTATTTTCGTGCTCCCCATGCCCATATGCGGCCCAGGA
ACAACAATCACACACCGTTTTGGCTTATACAAGTGTTTATACCATTCTTC
GGCCCTGCTCACCGCTCAACCTTAGCCCTCAGCGAACATGTTATGAATCT
TGTACCTCGACCCCAATACAACGTTTTTTCACGAAAACACATGCTTCTTT
CGGAAAAATAGGGTTGTGTTGATCGATGCACATGATATACAGAGGGTGTG
AACCTCAAATATACAATACACGACCCTGGTGGCCCCATCGAACGTCAGGT
GAAAATTTCCCGCACCGACCTGCTTTCTTTGTCTCCAGAGGGCTTTCTTT
TTTGTTCTGGTGGAACCAGGAACAACAGTATTTGGCACTCACAAACGGAG
GGGATGGCCAGAAATTGCGGAAAGCAAGTATTTTCATGCTCCCCATACCT
ACATGCGGCTCAGGAAATGCAATGATACACGGTCTTCGCCCCCACAAGTA
CCTATGCCATTGTTCGACCTTGCTCACCCCATTCTACCCAGGATTCACTC
GTTCAAAATGTTGCGCATTCGTTGTACGAGTATGTTTGGAAACCTCAGAG
AGTTGGGGCAGGGTCTGATTACCTGTGGTGTATTTCATCGACCGTATTAG
ATTCCTTGTCTTAGCGAACCGCCCGTACACCACATTTTTGCATGCTATCG
AAGGTCGATGCTTTTTTTCCGGTGGTTTCATGGTGTCGCCAACCTCTGAC
ACATGCCATCCGAGTTATATTGCTTGCCGCAGCGAACAAGCACTAAACGC
GAGTACTCTGTTCAATTATCGTGATCTGCCAAAGAAAGAAGACTATCATA
ATGCGACATTTTGTCCACGGAAAACAACAAGAAGAAGCGAGTTGTGAACC
TCCTACCACCCCGCATAACACGATGAACTTGCGTGTCAGACCTCAGGGTC
AACAGGCTCTGCCTCCTGTACGGGACGACTGAATCATGCACCCTGGGCTT
GAAATCCGAGCGTTAATTTCTATGCCGACTTCTCACCACACAGACGGGCA
CATCATTTGCCGGGACAAAACCAAAAATTGAGCAGCAATTGCACAACAGC
GCAGCCAACACAGGCATCGATACCACGTTTAACGAATACAACACCTTACA
GCGCAGCCGGGGAGGAAAAAAAACGCGCTACGTAGAGAGGGAAACAGACC
TGGCAGGCACGCTTCCAAAGCAGGTAAGGCTCACGGTGGGACGCTCGAAA
GCCAATCCAATAGACAACAACCAAGTGCCAGATGGTATGCACTTCGTATG
CAATTCGCCCCCCCCCCCGATACACACACACTTACGTCAGGCTAATGAAC
GGAAATCGAATCGAAAATAAAGAGACATCGGACAAAACGAGCACGCGGGA
CCCCCCCCCTGGAAACTACCATTTTCCGGTCTCCTCCCTCTCCCTTGCTC
CTAGCTCCTCCAGCCGCTCACACTGGTCCTCCTCTACCTCTCCCTCCCCC
GCGCTCAGCAACACAACGTTCGCGTTTGTGGAATACTCTGACATGTGGGA
TTTATTATCGCTCCAAATACGGTACAACCGTTGTCGTGCGTGAGTAAAGT
AGGTGCCCTCGAACAGCGCTGTCCAGTGGAGCTGTTACGGTAAAACCGCC
ATCACATCGGAGACATTGGTCCTACTCTTCTGGACTAAATACAAGCACGC
CAACTAGTTGCAAGTCACTCTGGACTCAAGAAGCAAGCGCTGAGTTTAAG
GACACCAAGTCAAGCCTCCCGAAACTATCGAAAACGCGCAGCAAGGGCTT
TGCGCAGTAACACCTCCCGCATGTCCATAGCGCGGCATGACACGTGGACA
ACTTATCTCTGGGGTGGGCGGCCGCCGCCTCCAACAGCACGCCCACGAAC
TTCTTATTGTACTTTGCGTTCTGGAGTTCGTTGATGACTCTGAGAGAGTA
GGTGAAGTTCGAGAAGTTCATCCCGTTGATGGACCGAAGGTAAACGGCCT
TCTGACCATGGTCGGATTCGTGCACGGTAAGATTTAACCCGGCAGCTTCT
GTACACTTGGTCATGCCACTATACTTAGCTCTACAGGCCGGCGCATGGTT
TGACTCGTGGTGGCCATCCGGACCCATGCGCAGTCTCCTTGTGGCCCATC
CTTCTCCTTTAGGGTCCTCATCGCTGTTGTCATACCTCGTGTCGTGAAAT
ATCGCTTCGTAGCCATCGACCTTGTAGTCCTTGGTGCTCTCGTGTGGCAC
GGCACTCCGCGCCAGCATCACTTGGAGTGACTTCGCACAAAATACTCCGC
GCCCAAACCCAACCCCCCCGCGAACGGCGATCCCTGTACATGCGCCGGTC
ATGGGACAGAATCGATGGCAGGGTGTGATAGCATCAACACTTAACATAGA
ACGTCTCCATCGTTTGCTATGGTACAAAACACATCTGGCACATCCCGGGC
GTTTGTTTCTAAACGAGGCCAAAGAGGCCCACCATTGTGCCTCCTCTCAA
AAACTGACAACAAAAATCGCACCTGCTACCTCTCTCGCTCTTGAATTTGT
TGGTTTGAGGCCATCCACGACGAAGAGTTCCTTTGCCTGCGGGGATACAG
TAAAACAGAGAAAAAGGAGGGGCGCATGGTGATGAATGCGGGGCGACTTC
TTCGTTACCAAATGCAAGGAAACGTCGAGGAGGGAGGGCAAACGATAGGA
TACATTCGGAGGGGGGGGGGGGGGGTTCTAGACACCATGCGAAAACGGAC
GACGGAGGGTGAGCTTCGTCAAAACATTTACTTCGTACTATCTAGCAACA
CTGGGGGATAAACCGACTTGGGGCATTATATTACGCGCCCACTACTCACC
TTAGCGTAGCGTTGCAACCCCGCAAGGATGTCCCCCTGAGAGATGATGTC
TTCGCTCAGCCAAGACGGCAACGCCGACACCTTGCTGGCTTGCCTTGATC
CCGACAAGGACATGAGCACCGGCAGCAAGAACTCGGCGGCGTCGTGGTGG
CTGACAACGTCGGCCTCCTGATTGACACCCGAGCCACCGCTAGGCGAGGC
CTCGGGGTGAGATGAAGGACCTTGTAGAGCCCGGCCGTCGTTACCAACAA
CCAAACCCCCCGATGCCGCGTGTTTACGGTGCCAATAGTACGTGAACACG
AGCACCTCAAACAGAGACAAGACCCTCATCGCATCTCGCAAGAGGGCATC
TAGTGCCTTCCTGGCCGCCTCTCGGCTTGGCTTCCCCACACGTTCGAAAT
AGAATGCTGCCCAATAAAGTGCTTCATCGGGGTCTACGTCGCTTTGCAGA
CCAGGCCTCGGGCCAGACGATTCCATGACGGCGTACACATCCGCGTCGGC
CTCCTTCGCTGGCTCTTGGAGCGGCGTGAGGGGCACTACTTCATGGGCGG
CAGCGTCGCGGTTGTTTCCATACGGTGCCAGCTCTGGAAAGCACACATTG
CCGAATTCGTCACGCGGCAATACCCCTTTGTCCTTCAGGAGCCCTGGGCA
TGCCGCTTCGATCCCTTCCACCAACTTGCAGGCGGCGTCATAGCAAAGGA
AAAGCATCTTCACCTGGTTGACAAATAGCAACCGTACGTGAGCATGACAG
ATACCATATCATATCATATCATATCATATCACATCATTCGTGTGAGATGC
TTGAGTGAAACAATGTGCAGCTGCCAATATGAGCGAGTTTTGCTGCTGCT
GCTGTGTGCGTGCCACTAGTCCCACTAGTCCAATACTGCAGCAGTAGCGT
ACAACGTGGTGAACCAACTAACTCCTCTCCGTCGCGGGTTGGAAATGACG
ATAGGTATTATTATGGTTTTATATGGACAGTTTTATATACCCAGCCCGAA
TGGATCGCCCCTCTGCCCCCCCCCCGCCCGCCAAATAAAAATCTAGGATG
GGTAACAGACTTGCTAAACTCACTTGAAATAGCAGCACGTGTTCTTCTCG
GACGCCCGGTGCGTGCAGCATACCCTTTTCACACCAGGTCCTAGTGAAAC
CTCGTGTGCGTGGCTCTTGTGTACCCACCGTCGGCAGTCGGGATTATCCT
CGCACAGCTTCAGCCTTTGGCGGCTCCGCGTCTCGGTTAGATTGCAAACT
GCGCATTGCTTGTTGTACGTGAAGTTCGTCACAGCTCCGACGTCGCTGTT
GACGCCTCCACCACCCCGTTTGCGACGGCGCGGCGTTGCGGGTGTTGCCG
ATGCTGTCGTCGCTGCTGCTCCTGCTGCTGCTCCGGTTGCTGCTGCAGGC
ATCGCGGTGGCGGTTGCTGGGGGAAGCACTGCTGTAGGACCGATGCTGTT
GGCCACCCTTCCCTGTTCTGGGGCTGGTCGAGGAAGAATCGGATGGAAAT
TCCTGGGGCTA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1141:11096..19706+ >mRNA_P-littoralis_Contig1141.3.1 ID=mRNA_P-littoralis_Contig1141.3.1|Name=mRNA_P-littoralis_Contig1141.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=435bp|location=Sequence derived from alignment at P-littoralis_Contig1141:11096..19706+ (Pylaiella littoralis U1_48)
CATGAGCGTGGCTGCCTGGACCTTCGTCAGTCACCCGTCGAGAGCAATGT
TCAACCTTGGTTTCTATCCGCTGCCAAAAGAGACGGGGGAGAAGCAGCAG
CAATAATAGCAACGCAGACCTTCAGCCTGGATGTCGCTGCCGCTGCCGCC
ACTACGCTTCTGATCACAATACTGCTGCATCATTGGCGGAACACCAGGGT
TTTGGGCTCATGGACGGAGGGGATGACCAGAAACTGCAGAGACCAGGCGT
TTTTTACCCTGGCGGAACACCAGGGTTTTGGGCTCATGGACGGAGGGGAT
GACCAGAAACTGCAGAAACCAGGCATCGCGGTGGCGGTTGCTGGGGGAAG
CACTGCTGTAGGACCGATGCTGTTGGCCACCCTTCCCTGTTCTGGGGCTG
GTCGAGGAAGAATCGGATGGAAATTCCTGGGGCTA back to top
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