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Homology
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A6H5JBQ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBQ1_9PHAE) HSP 1 Score: 518 bits (1334), Expect = 3.060e-167 Identity = 325/552 (58.88%), Postives = 358/552 (64.86%), Query Frame = 2
Query: 107 LLLLAGRAHSFCLGPSK----ARGGHRGQQHGVSRHTSSSRPFGVVYGGRGRDGGGGIAASRLPQHPQXXXXXXXRPSSVSMAVPRTYRRQRAPMVPTAPTTSAPTMMSAETGSEASGAESAAAGGEYVIGGEGADTGGGDG-------GVEIPEDLAVAAAPAAALAVDGAEAXXXXXXXXXXXXXXXXXXXXXXXXAANVAVXXXXXXASVLPSGGKEFVSKEHRRAGPFKAVLLYLDYVRWLWDVTDKERLDREQPQGMVSERVKTVLSGVEDLGREAGVSLRESSVKPQFEALVSASDALKKALASAKINKPDSAQEAAXXXXXXXXXXXXXXXXXXXXXXXXVESPPVAKSMLSTLTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRYPAWAPVPVPDTITQ---GALITWWTYNSIVAADVGAYFVGKSLGKRR 1720
LLL +GRA SFC+GP+ AR G Q G RH S F V GG G G +AAS+ + SS + T R R T TMMS+ TG+E + V+G G+ G G+G G + PE A A A GA+A AA A V SGG EFVSKEHRRAGPF+AVLLYLDYVRWLWDVTDK RLDREQPQG+VSE+VKTV+SG+E+L R+AGVSL ESS++PQFEALVS+SDALKK LASA+I SA + SP K +LSTLTKRVRTG MA VATVWIFSGNW FSVGFALQA+LAQLEYYRMAMQKGVKPARRISAVAT LLYSFAV FP+LHNYVMANIG YIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRA+GTGFPTVSWAGVRAYFP YPAWAPVPVPDTITQ GALITWWTYN+IVAADVGAYFVGKSLGK +
Sbjct: 11 LLLSSGRARSFCVGPTASSRTARDGRTEGQEGSRRHPSPRAFFVGVGGGSG----GRLAASKRLSQQRLRRCSSRNASSCFVGPTETTSRPRT----TGRRQQRSTMMSSSTGTEP----------DDVVG-FGSTEGEGEGVHVTVGRGEDAPEVFA-----AVGDADGGADAGTVGRQPIGN--------------AAGAA-------QPVFASGG-EFVSKEHRRAGPFRAVLLYLDYVRWLWDVTDKARLDREQPQGVVSEKVKTVISGIEELRRDAGVSLTESSIRPQFEALVSSSDALKKELASAQIMPVQSATASGGS----------------------ASSPAPPKGILSTLTKRVRTGVLMAAVATVWIFSGNWFFSVGFALQALLAQLEYYRMAMQKGVKPARRISAVATVLLYSFAVGFPYLHNYVMANIGLYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRALGTGFPTVSWAGVRAYFPWYPAWAPVPVPDTITQARQGALITWWTYNTIVAADVGAYFVGKSLGKTK 494
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A836CA52_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA52_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.900e-78 Identity = 152/324 (46.91%), Postives = 203/324 (62.65%), Query Frame = 2
Query: 761 GPFKAVLLYLDYVRWLWDVTDKERLDREQPQGMVSERVKTVLSGVEDLGREAGVSLRESSVKPQFEALVSASDALKKALASAKINKPDSAQEAAXXXXXXXXXXXXXXXXXXXXXXXXVESPPV--AKSMLSTLTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRYPAWAP--VPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRR 1720
G + LY DYV WLW T LD++ + V ER++ ++ +E L R+AG LR S ++ +FE ++A+ +L+ + + +A A ++PP+ +S +S +R+ TGF M G+AT WIF GNW F+VGF LQ+++AQLEYYRMAMQ+G PARRIS VAT +L+SFA P HNY MAN+GF+IM Y+LL+R+TP TI DISTTFMGVFY AYLPSFWVRLR +G+ P V+ +P+WAP +P PD T GAL+TWWTY SI+AADVGAYFVGK G+ +
Sbjct: 50 GLLSPLALYWDYVAWLWKSTTIYSLDKQLGRAGVVERIRAAVATMEALERDAGERLRSSELRDEFEQTLTAARSLRAKAETFPLPSGTNAVAQAVQQ----------------------QAPPIDPQRSKISNAMQRIHTGFTMGGLATFWIFMGNWGFAVGFFLQSIMAQLEYYRMAMQRGHLPARRISLVATTILFSFACWLPTYHNYAMANVGFWIMLYYLLIRKTPGTISDISTTFMGVFYAAYLPSFWVRLRGLGSILPA-ELVLVKRLANVWPSWAPKMLPPPDVWTTGALVTWWTYVSIIAADVGAYFVGKRFGRTK 350
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A0G4EIK6_VITBC (Phosphatidate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EIK6_VITBC) HSP 1 Score: 186 bits (473), Expect = 2.380e-47 Identity = 126/334 (37.72%), Postives = 178/334 (53.29%), Query Frame = 2
Query: 770 KAVLLYLDYVRWLWDVTDKERLDREQPQGMVSERVKTVLSGVEDLGREAGVSLRESSVKPQFEALVSASDALKKALASAKINKPDSAQEAAXXXXXXXXXXXXXXXXXXXXXXXXVESPPVAKSM-LSTLTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPT--VSWAGVRAYFPRYPAWAP--VPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRRPRSRPPSAPACS 1756
+ V YL YV+WLWD + D+ +PQ ++ + + AG R+ + + + SA + AQ AA + PPV+ + LST+ KRV TG + T W+FSGN +F++ LQ ++AQLEYYRM + KG+ PARRIS V++ +LY+ A P H V+ G IM +FLL+R +P TI +IST+FMG+F+ +YLPSFW+RLR +G T V+ +R + YP W P P PD TQGA++TWWT+ SI DV AYF+GKS G+R+ S P+A A S
Sbjct: 48 QGVEWYLSYVKWLWDGKNIPPNDK-RPQLLMLDIAGNGQDAHRTMAAAAGEGARDPAAGHEDQGSKSA--------------QTQPAQPAAISPK--------------------MRGPPVSLAQRLSTVKKRVLTGVGLGLFGTAWVFSGNALFTMIIILQCIVAQLEYYRMCIFKGIYPARRISMVSSLILYTMACYAPQYHELVLPLSGTAIMVWFLLMRPSPGTISEISTSFMGLFWCSYLPSFWIRLRFLGPVEKTRFVALLNLRKW---YPPWLPKITPPPDLWTQGAVVTWWTFLSIAMGDVAAYFLGKSFGRRKLASISPAAGAAS 343
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: W7U3H9_9STRA (Phosphatidate cytidylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3H9_9STRA) HSP 1 Score: 184 bits (468), Expect = 5.060e-47 Identity = 91/203 (44.83%), Postives = 131/203 (64.53%), Query Frame = 2
Query: 1121 SPPVAKSMLSTLTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRYPAWAP---VPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRR 1720
S P +L R+ TG + +AT W+F G WVF GF +QA+ AQ EYYRM ++ GV P+RRIS V+T L+Y A PF H V+ G +M + LL+R+ PA I ++STT +G+FY YLPSFW+RLRA+G P+ ++A + A +P+W P +P P+ T+GA++ WWTY +I+ AD+GAY GK+LG+ +
Sbjct: 96 SAPTRPKKKGSLQTRIATGIVLGALATYWVFGGKWVFMAGFLVQAIFAQREYYRMCIKAGVTPSRRISFVSTLLMYVIACHVPFYHEMVLPLAGTAVMIWLLLMRKAPAKITEVSTTILGMFYIGYLPSFWIRLRALGDVMPS-TFASILAKV--WPSWIPLRLIPDPEMWTEGAIVIWWTYLTIICADIGAYATGKTLGRTK 295
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A7R9UDX9_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDX9_9STRA) HSP 1 Score: 169 bits (428), Expect = 9.370e-41 Identity = 96/206 (46.60%), Postives = 124/206 (60.19%), Query Frame = 2
Query: 1133 AKSMLSTLTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRYPAWAPVPVP------DTITQGALITWWTYNSIVAADVGAYFVGKSLGKRRPRSR 1732
+K L KRV T M VA+VWIFSGN ++ G L LAQLEYYRM + GV PARRIS V++A LY A +P LH V+ ++M +FL++R A+I +IST+F+G+FY YLPSFWVRLR +G+ + + + +W P P D T GA++TWWTY SIV ADVGAY VG+ G R P SR
Sbjct: 214 SKKTSGKLRKRVVTSLIMGAVASVWIFSGNAAYAFGLFLTVSLAQLEYYRMVIATGVYPARRISIVSSACLYFSAAFYPHLHELVLPLTSIWVMMWFLIMRMKYASIAEISTSFLGIFYAGYLPSFWVRLRRLGSDVGSEAIMAKLPFLVGMGSWLPSWFPKVDLSRDMWTTGAVVTWWTYLSIVFADVGAYAVGRLFG-RTPLSR 418
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A7S1BM23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM23_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.800e-37 Identity = 82/194 (42.27%), Postives = 112/194 (57.73%), Query Frame = 2
Query: 1160 KRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRY-------PAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRR 1720
+ V G M V +W+FSGN++++ F L +L QLEYYRM MQ GV PAR+IS V ++ A+A P LH + G + M +FLL RR +TI +I+TTF G+FY Y+PSFWVR+R +G PT V R P W P P +TQGA+ +W + SI +DVGAYF G++ G +
Sbjct: 45 RSVLRGAIMGAVVALWVFSGNYLYTGLFTLLTVLGQLEYYRMVMQTGVFPARKISVVGACSMFVTALAAPNLHQICLPLFGLFSMAWFLLARRNVSTIPEIATTFTGMFYLGYMPSFWVRVRQLGVREPTRMAPLVAPLLERIGTKAASLPPWIPASFPLPVTQGAIFIFWAWISIAFSDVGAYFAGRNFGNTK 238
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: B7G3Q8_PHATC (Phosphatidate cytidylyltransferase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G3Q8_PHATC) HSP 1 Score: 154 bits (389), Expect = 1.780e-35 Identity = 121/372 (32.53%), Postives = 183/372 (49.19%), Query Frame = 2
Query: 704 ASVLPSGGKEFVSKEHRRAGPFKAVLLYLDYVRWLWDVTDKE--RLDREQPQGMVSERVKTV-----LSGVEDLGREAGVSLRESSVKPQFEALVSASDALKKALASAKINKPDSAQEAAXXXXXXXXXXXXXXXXXXXXXXXXVESPPVAKSMLS-TLTKRVRT---GFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRY----------PAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRRPRSRPPSAPACS 1756
+S+ GK FV+++ P +AV +Y +YV LW T+ E ++ + RV+ + L+GV + G++L V EA+ A + +++ N D + +ES P +K+ TL K+ R+ G M V W+FSGN++F+ F L +L QLEYYRM M GV PARRIS + + ++ A+ P LH + G Y M +FL ++RT TI +I+TTF G+FY Y+PSFWVR+R +GT PT A V F R+ P++ P V IT G++ +WT+ + +DVGAYFVG+ G + + P+A A S
Sbjct: 132 SSISVPTGKRFVARQLASL-PQRAVRIYSEYVSRLWRETNPEARQIISQDKAATAIRRVQHLIRGEQLAGVVSWEEKNGLALACDHV---LEAIEQAHRETARNISAPVTNGMDMS----------------------------IESKPTSKTAPPPTLQKKSRSVLFGAIMGAVVACWVFSGNYIFTGLFTLMTLLGQLEYYRMVMGTGVNPARRISVLGSCSMFLTALFTPSLHEICLPIFGLYAMIWFLTMKRTVTTIPEIATTFTGMFYLGYVPSFWVRIRILGTQEPT-RLASVAEPFLRFLADKSQAKLVPSFIPQAVVLPITTGSIFIFWTWLCLAFSDVGAYFVGRRYGNTKLGAVAPAAGATS 470
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: M1V919_CYAM1 (CTP:phosphatidate cytidylyltransferase, phosphatidate cytidylyltransferase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V919_CYAM1) HSP 1 Score: 150 bits (380), Expect = 3.000e-35 Identity = 85/192 (44.27%), Postives = 114/192 (59.38%), Query Frame = 2
Query: 1154 LTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTP-ATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPR--YPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRR 1720
L RV +G M VAT WI +G WVF+ G + A+L QLEYY M KG++PA+R A+ L A A P V I Y LL RR ATI DISTTFMG+FY YLP+FWVR+RA+G G + V + P +P W +P P+ T GA +TWWT+ S+ ++D+GA F+G++ G+R+
Sbjct: 130 LAVRVVSGIVMGLVATTWILAGIWVFTAGLTVVAVLGQLEYYNMVRAKGIRPAQRAGIAASILALWVAAAAPQASEAVFPVSATLICTYMLLHRREKFATIADISTTFMGMFYAGYLPTFWVRMRALG-GIEQTRFPAVVSRLPDVLWPGW--LPPPEGWTVGAALTWWTWLSVASSDIGALFIGRAFGRRK 318
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A7S2RST6_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RST6_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.070e-35 Identity = 86/191 (45.03%), Postives = 116/191 (60.73%), Query Frame = 2
Query: 1148 STLTKRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTGFPTVSWAGVRAYFPRYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRR 1720
S+L KR+ TG+ + WIFSGN ++G L A +AQLEYYR + GV PARRIS V T ++Y A P LH V+ +M +FL++R P TI +IS++FMG+FY YLPSFWVRLR + G P + A P + A +P D +TQGA++ +WT +IV DVGAYF GK G+ +
Sbjct: 183 SSLAKRLATGWALGAGCAWWIFSGNLGHALGLFLLAAVAQLEYYRSVISTGVYPARRISLVTTFIMYMTACYAPSLHQLVIPLAATAVMTWFLVMRPKPGTISEISSSFMGMFYVGYLPSFWVRLRTISEGLPVTTVAA-----PGFFAALGLP-SDIVTQGAVVKFWTCLTIVGCDVGAYFGGKYRGRTK 367
BLAST of mRNA_P-littoralis_Contig1140.12.1 vs. uniprot
Match: A0A1Z5KHS4_FISSO (Phosphatidate cytidylyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHS4_FISSO) HSP 1 Score: 150 bits (378), Expect = 3.530e-34 Identity = 84/209 (40.19%), Postives = 119/209 (56.94%), Query Frame = 2
Query: 1160 KRVRTGFFMAGVATVWIFSGNWVFSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLHNYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRAVGTG----------FPTVSWAGVRAYFPRYPAWAPVPVPDTITQGALITWWTYNSIVAADVGAYFVGKSLGKRRPRSRPPSAPACS 1756
+ + G + W+FSGN++F+ F L + QLEYYRM M GV PARRIS V ++ A+ FP LH + G Y M +FL +RR+ ATI +I+TTF G+FY Y+PSFWVR+R +G P V++ +A + P W P V IT GA+ +W++ + +DVGAYFVGK+ GK + + P+A A S
Sbjct: 245 RSIMRGXXXXXIVAAWVFSGNYIFTGLFTLMTTVGQLEYYRMIMNTGVYPARRISVVGACSMFVTALFFPDLHQICLPLFGLYAMVWFLTMRRSVATIPEIATTFTGMFYLGYVPSFWVRIRLLGASREPTRLAPLLSPLVNFIQGKAT--QLPTWIPQAVHLPITTGAIFIFWSWLCLAFSDVGAYFVGKNFGKTKLSAISPAAGAAS 451
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FLN3 |
| PFAMs | CTP_transf_1 |
| Model size | 3576 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002,RC00055,RC00523 |
| KEGG ko | ko:K00981,ko:K14163 |
| KEGG Reaction | R01799,R03661,R05578 |
| KEGG Pathway | ko00564,ko00860,ko00970,ko01100,ko01110,ko01120,ko04070,map00564,map00860,map00970,map01100,map01110,map01120,map04070 |
| KEGG Module | M00093,M00121,M00359 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034641,GO:0034654,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055035,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 |
| Exons | 10 |
| Evalue | 3.3e-176 |
| EggNOG OGs | COG0575@1|root,KOG1440@2759|Eukaryota |
| Ec32 ortholog description | Phosphatidate cytidylyltransferase |
| Ec32 ortholog | Ec-17_000480.1 |
| EC | 2.7.7.41,6.1.1.15,6.1.1.17 |
| Description | phosphatidate cytidylyltransferase activity |
| Cds size | 2064 |
| COG category | I |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03016 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789466.0490165-UTR-P-littoralis_Contig1140:27643..27671 | 1680789466.0490165-UTR-P-littoralis_Contig1140:27643..27671 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1140 27644..27671 + |
| 1680789466.1859362-UTR-P-littoralis_Contig1140:41836..41897 | 1680789466.1859362-UTR-P-littoralis_Contig1140:41836..41897 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1140 41837..41897 + |
| 1680789466.1979065-UTR-P-littoralis_Contig1140:41959..43382 | 1680789466.1979065-UTR-P-littoralis_Contig1140:41959..43382 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1140 41960..43382 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789466.0664222-CDS-P-littoralis_Contig1140:27671..27801 | 1680789466.0664222-CDS-P-littoralis_Contig1140:27671..27801 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 27672..27801 + |
| 1680789466.0760179-CDS-P-littoralis_Contig1140:32063..32782 | 1680789466.0760179-CDS-P-littoralis_Contig1140:32063..32782 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 32064..32782 + |
| 1680789466.0855591-CDS-P-littoralis_Contig1140:33320..33476 | 1680789466.0855591-CDS-P-littoralis_Contig1140:33320..33476 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 33321..33476 + |
| 1680789466.0972486-CDS-P-littoralis_Contig1140:35597..35862 | 1680789466.0972486-CDS-P-littoralis_Contig1140:35597..35862 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 35598..35862 + |
| 1680789466.1110938-CDS-P-littoralis_Contig1140:38026..38132 | 1680789466.1110938-CDS-P-littoralis_Contig1140:38026..38132 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 38027..38132 + |
| 1680789466.1240773-CDS-P-littoralis_Contig1140:38608..38834 | 1680789466.1240773-CDS-P-littoralis_Contig1140:38608..38834 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 38609..38834 + |
| 1680789466.1351666-CDS-P-littoralis_Contig1140:40512..40595 | 1680789466.1351666-CDS-P-littoralis_Contig1140:40512..40595 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 40513..40595 + |
| 1680789466.1470892-CDS-P-littoralis_Contig1140:40674..40950 | 1680789466.1470892-CDS-P-littoralis_Contig1140:40674..40950 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 40675..40950 + |
| 1680789466.1686666-CDS-P-littoralis_Contig1140:41733..41836 | 1680789466.1686666-CDS-P-littoralis_Contig1140:41733..41836 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1140 41734..41836 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1140.12.1 >prot_P-littoralis_Contig1140.12.1 ID=prot_P-littoralis_Contig1140.12.1|Name=mRNA_P-littoralis_Contig1140.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=688bp
MAHAWATGRCSHSTAMSFRLVLQASALLLLAGRAHSFCLGPSKARGGHRG
QQHGVSRHTSSSRPFGVVYGGRGRDGGGGIAASRLPQHPQQQRQQRPRPS
SVSMAVPRTYRRQRAPMVPTAPTTSAPTMMSAETGSEASGAESAAAGGEY
VIGGEGADTGGGDGGVEIPEDLAVAAAPAAALAVDGAEAAAAAAAAAVAA
DGAEPAAAAEAEAAANVAVAAAAAAASVLPSGGKEFVSKEHRRAGPFKAV
LLYLDYVRWLWDVTDKERLDREQPQGMVSERVKTVLSGVEDLGREAGVSL
RESSVKPQFEALVSASDALKKALASAKINKPDSAQEAAAATSTSGAVPAG
AGSSSSSSAAAAVESPPVAKSMLSTLTKRVRTGFFMAGVATVWIFSGNWV
FSVGFALQAMLAQLEYYRMAMQKGVKPARRISAVATALLYSFAVAFPFLH
NYVMANIGFYIMCYFLLVRRTPATIGDISTTFMGVFYGAYLPSFWVRLRA
VGTGFPTVSWAGVRAYFPRYPAWAPVPVPDTITQGALITWWTYNSIVAAD
VGAYFVGKSLGKRRPRSRPPSAPACSDGRRGGPRDRLTAPCCASWAWWET
SRRRCSSGTPVSRTRGACCPGTGGTWIASTVTFSRRPRLTCLSCTFFLWL
RSLRRVAARMRRLSAGGVRRTIPSPERAWDRPRVIHA* back to topmRNA from alignment at P-littoralis_Contig1140:27644..43382+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1140.12.1 ID=mRNA_P-littoralis_Contig1140.12.1|Name=mRNA_P-littoralis_Contig1140.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=15739bp|location=Sequence derived from alignment at P-littoralis_Contig1140:27644..43382+ (Pylaiella littoralis U1_48)
GTTGGGGACGTGCTGGACGGAATGCAACATGGCTCATGCATGGGCTACCG
GTCGATGCTCACACAGCACAGCCATGAGTTTCCGCCTTGTTCTGCAAGCC
TCCGCACTGCTGCTGCTGGCCGGTAGAGCACACAGCTTTTGCCTGGGGCC
TTCAAAAGGTAAGGACACTGCTTTTGCTTCGGAGGGGAAGATACCCTGCC
AGGTGCTCTTGCCTGATGATGTTGCTGCTCGCTGCAGGTAGGTGCAGCTC
ATTCTGTTATATCGTCGGCTATCTGGGTACATGCAGGCGGGCTGATCTTC
AAGATCTTTATGATCATGTACGTCGAGCTCTCCTTTCGTTGTTGCGCGCA
CTTTCTTTGCCAATCAAATACGATTCCGAAGCATGCACTCTTACCATTTG
CAACCACCCCGTAGTATACTGCTGTATACCACTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATTCTCACATTAGCTCACT
ACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGG
AGGAAAAAAATAAAATAAAATAAATGGACTATGATCACCCACAGTCAAAT
CAGATGTGGTACCGTTGGGGTACCATGTGTGGTGGCCAAAGTACCAAACA
AAATACAGAAAAAAAAAAACAGGTTTGAAAGAAAAAACAAAAATTTGAAA
CAGTACGACGAACAAAAAAAAACAAGACAAACCTTAACCATAACCATCTA
CTTCGAAGTACTTCGTACATCGAACCAGGGCCCAGGGCCATGATAGACCA
AGGCAAAGGCAAACCTGCTGCTGTATGATATTGGTCCTGTACCGCAGTTG
GTTCAACTCACAGCCTTTGTTGAAGCTCGCTTCGACTCGTGTTGACACAT
CCAGCGTCGGGAACAAGGAATACCCAGAGTCTCTGGCACATCGTAACGCC
AGCTACCTTTTTCGTGTACTGTAGGGTTCCACTGACCCCACGTGTAGAGC
GAGTGTAGAGCGGGTGTCTGGTTCCTCGGGGACCCTGATTGAGTTTCCCT
TTGCTATCATATCATACTACTATACTCTCCGTTCCCTCGCTGCCTAGGCA
AGGTCTGCTATAAGCATGACCCCAAAGCGAGTTGGGGGGGTCTTTCTGGC
GGGTGTAAGGCCGGACTCACCCTCAAGGAGTGATACCTTCTTGCCGCTGC
GCTGTGGTCGAACGCCACGGGCGTGGCGGTAGAGTTGGGTCGCAGTTGGT
GTGCCAGGTGCAAATGTGCGGATTCGCGGGCTTTTTGGTTACAGCGGCAG
TGCAGCAATGTGCATCATCACAAGCATTTGTGCGCGGAGGCAGGCGACAC
CACAGGTGAAAAGACGGTACGATCTAGGATGCGCAGAGGGATTGATTGTG
CCGTCCAGTAACCAGTTTCGCAGCCAAGGACGGAGGTAGACGAGCAGCGA
CGAACGGGGAACAGCTTGGTCGATCTCATTCCGAGCGTGAACTTTTTTTT
CAGAAGACTTGTACCTCTAGCGCACAGCGGAGCTTAAAAACCTGACTGGA
AAGGAACAAGAAGAGCTGTTATTATGCGAGAGAGCGGCGGTGATGGAGGT
GACCTAAGGCAACGCCGGCAGTGAAGAAGCGTTAATGAGCATGGTGCTGG
TGATGTGGCCTTGGGCAACGCCAACAGCGACGTGGACCCAGACAGAGAGG
AAATGTTTAGGGCGACATCGTCACCACCAGCGTCGCAAGGACGGCATGGA
TACACCATCCTCGACAACATCTGATGATGATATCATACGTGTGTTTTTCT
TTTTCTGTCTTCTCCGATTCCCGGGGCTACTTGTTTGTACGTTGCAGGCA
GCACTCCAGACAGCAACTGCTGTTATCTGCAGCTAGCTACTAATTATCGC
TTGTACAGAGTAGGGTATTAGTCGTAAGTGGGGCGGGAGGAGACTGAACA
CGATGTTGTAGTCAAATGAACTACGCTGGATATACGTTTGTTTGCTGTTG
GTACTGCTGTGACTGCTGTAGTTCAGTGATGCACACCACGTTGGAAGGTG
TATCTTCTTCGGTCTTTCTTGGGTATTCCCTCGTAGTTTATTTCTGTTTT
TTGGATCTTCCTAGGGCTTAGCACTTTTTGTGACCACGGGCTAGATTTCG
GCGATGAGCTAATGTGAGGCCCACTCTTATGGTAGAGCCGAAAATTGGAA
TCCAAGGGTTTCACATGAGGAACTGGAATCCAAATTCCAGGCCTGGAAAA
TATTTCTATCTTATGGGGGTTGTTTTCGGTCGGAACCGGAAAATATTTTC
CATTTCTCCGGATTCCAGGCGAGTCGCCTGGAATCTGCCCTCGGATTCCA
GGCCAAATGACCTCGGATTCCAAGCTGGAATCCGTTGCGCGCGCGCAGTC
ACGAGGTCCCGCCGCAGTGGTTCACAGCACACAACAAGCACAAATACAAA
CAACCGAGCGCACAAACACACTGGCCAGGTGCAGGTACCAAAGCGACGTG
CGATCCTGGCCGTGCTGGCAATAACGCTTGCCGCTCTGCGCCATCAGCAG
CAGTTTATCGAAAGTAGCCCAAACCGCCTGCCGTCCATCCGGCAACCCCA
TCTGATTTCCAATCGCTGCCCAAATTTTCCAGTTCTCCCATAAAGTTGGA
ACCAGTCTGATTGTCCGACTTGGAATATCAGGCTTGGAAAACGCTTTTCC
AAGTCGAGAAATTCCAGTTGCCCATCTACCATAAGATTGGGCCTGAGAAT
CAACAACAACCACATGAATCCTGGTTCCTTTTGGCACTGGCCGTCCTGTA
CAAAAAAAGTCCACGATCAAATGCCGCTGCTGCTGTGTGTGCGACGTTCT
CACCGGAGTCATCAAGGGCGACCGTTGACTCCCATACACCAATGCCATCT
GCGTAGATGGTACCCCTTCATTGATACTAGCGCAGCGCCGCTGTTGTTGC
CCAGAAGGTTAAAGACGGCCCTAAACCGGTACAGCAGTGAGAGCAGACAG
CAGTAGCGTCTACAGCTGAGTCCCGTGTTTCTGAAGTCTGAAGCCGGAAC
ACACCGGTTGAAAAATCAATGTTTTTTGTACAATGTACCACCGCAAAAAA
CGGTCGAAAGTCCTGCACGTGTGTGTGTGTGTCATCCCTTTAATTGGACG
CCACTCTGCATCTTTCGGGTAGGTCGACGCTCCAACTGGGGTCACGCAGG
GGGAGGAAGTCAACACAGGAGTTTTTTTTCTTCTCCACTTCCCTCTGCGG
TGCTTGCCTTGTTTTTGGTTGAGCTTTTATCGCGAGAAAGGGGACAGCAA
TCCCTTTCCCTCGTCGATGGTACGATCGAATTATGTTTACTCACGAATTA
ATCGCTTTTCACTTTCACGCGCATTGTGAGAAGGAAACCCAGATCGCGTT
ACTGCACTGGGATTCGAACTCACGCGTGAATGTCAGAAGGTTCACGTGGA
TGACCAACTGAACCACCGGGGCGACCGTTTCTGTGGAAGATTTTAATTAC
ACACGAAGTACGATTGATTTGTCCATCATGGGATCATTTTTTACATTGAT
GAGACGATGGATGCTTCGTAATCAAGAGCACATCGTGTATCATACATATC
ACACGCATAATATGTTGAACACATCAACCGCCCCAAAACACTTATCGACT
GCGCCTTAAAAGCGCCCGGCGAAAGCATCAAGAAGACGCCGGTCTGAACA
GCACATGCACAGCAGCTTCGCGGAACCGTATCTACAGCAGTACACATGAA
CCACAAAGAGAGGTATCATATCAACAACAGTAAGCAGTAGTCTCAGGGCT
GAACTGCTGCGTGGTATGCGTACAAGTATATGCTTGGGGCATTGACGAGG
TTTCTTTGGCAAATTGATTGCTCCGGAGACAAATAATCCACGTTTTGCTC
CAACGGAATCAATTATCCCCGAGATGGAGGTGGAGGGGCATGAAAGTCCT
AACAAGGGCGGTTCCCAAAACCGACCAGGTGAAGAGTTTGCACGGAGTCG
GGCTTAAAACCGCGGTGTGTTCCTGTTCCTGTCATTACCAAAACCGTACG
CATCTGTCCCCCCCCCCCGGGTTCTCTTTTAACCTATCTCGCCGCTGATT
TATGTACCTGGTATGATGCCTTTTCGTCTCAATGAGTGTTGGGGGTAATT
TATCCATTTTCATTTTTACTTCGAAGAACCGAACCAAACAAGCTAATAGT
GAACGGTTTCTCACAATGTCAAACCATCCCTCCCCATCCCTCCCCCCCCC
CACCCGCCGTCCGTTGGCATTTTCTACTTATTTTTCCGAACGACGAAACA
CTGAATTAAAATGCGGACAGCACGCGGGGGGCACCGAGGGCAACAGCACG
GGGTCAGCCGACATACTTCGTCATCGCGACCGTTCGGCGTCGTCTACGGC
GGGAGAGGCAGGGATGGCGGCGGGGGGATAGCGGCCAGTCGATTACCCCA
ACACCCACAACAACAACGGCAACAGCGGCCGAGACCATCGTCGGTGTCGA
TGGCAGTGCCGCGGACATACCGGCGGCAGCGGGCACCGATGGTACCCACT
GCTCCCACAACATCGGCGCCGACGATGATGTCAGCGGAGACGGGGTCGGA
AGCCTCTGGTGCCGAGAGCGCGGCGGCGGGTGGCGAATACGTCATCGGTG
GTGAAGGCGCTGACACTGGCGGCGGTGATGGCGGTGTTGAAATCCCCGAG
GATCTGGCCGTAGCGGCAGCGCCAGCAGCAGCATTAGCGGTAGATGGCGC
GGAAGCGGCAGCAGCGGCAGCAGCAGCAGCGGTGGCGGCAGATGGTGCTG
AACCGGCAGCAGCAGCAGAAGCTGAGGCTGCTGCTAACGTCGCTGTCGCC
GCCGCCGCCGCTGCTGCCTCCGTGCTGCCTAGCGGGGGGAAGGAGTTCGT
GAGCAAGGAGCACCGGAGAGCCGGGCCGTTCAAGGCCGTACTGCTGTACC
TGGACTACGTGCGCTGGCTGTGGGACGTGACCGACAAGGAACGGCTCGAC
CGGGAACAGCCGCAGGGCATGGTGTCAGAGAGAGTAAAGGTGACAAAACC
AGGCAACAAGGAGCGGGGGAAGAGGGACAAGGGTCAGAGGGAGAGAGAGA
GAGATGAGGGAGAAGAAGGAGAGAAGAAGGAGAGAGGACGAGAGTATGCG
CTGACCCTGCTATGTCTTTTTTTTTTTTTTGTACATGGCGGAGCACCGTC
GTCTCGTTTATCCCTGATTTCTGTGTTACTTTTCCAAGGCTTGCATATAC
TTCGAGTATATCATTATTTCGCTCTTGGTTCCCCGTAGCAGAGATGAGAT
TGTAAACTAAATCGTCTGCAATTGTACGAGGAGGATATCATATCACGATC
TCCGCAAAGTTTTGGAAACGTGTTTCCGCCGCCCCCCCTTGCTTTCCCCT
CGGCTGCTGCTTTGTCGTCGTGTGTTTTGCCGGTTGGCTCGATGTAGCCG
ATCTATGTCCCTTTCATTGAACGCGTGCTTTGGAGCCAACCGATGCGATC
ATTACCGCCCCGAGAGTTGTGTTAGTCTTCGTCATCGAGCCCCCCCCCCC
CGCCCCCCCCCCCTGGCTCACTTGTAGACGGTGCTTTCGGGGGTCGAAGA
CCTTGGGCGAGAGGCCGGTGTAAGCCTTCGGGAGAGCAGCGTGAAGCCGC
AGTTCGAGGCGTTGGTGTCAGCTTCGGACGCGCTCAAGAAAGCGCTCGCG
AGCGCCAAGATTAATAAGCCGGACAGCGCTCAGGTGCGGGCGTGCGTCGT
TCAAAGACACATCTCGTCGTACTGTGCTCCGAAGTGCGACACGCGGCGGC
CGTCGGCTGTGATATTGCTGTTTCGTTTGTGTGGGGTGCTGGGCGATATG
ATGTGGTTGTTGTTGCTAGTGATGTTGGGTGGTTGTCTTTGCTGCTGCTG
TTCTGGGTGGTGTTCTTATGGTCGCTTCGGCTGTTGTTCTTGTTGAAAAC
CTTTGTCACTCCGACCCAGTGCATGCGCAGCTCCAGCATATACCGTACAG
ATAGCTTCTGGTGCTGTCGGTGCCAGTATGAGGTTTTGTAAATAACACGG
GATGACGTTTTCGATCAACGAGCGTTTCGCAAAAATATCGACCGTATTTC
AGACGATGTAACTTTGTTTACGGATCCCCCCTCGGAGCTGTGGAGAACGC
TAGCGTATTCGACGTACACCCCTCACAAACAGATCCGTTGCGGTGGATCT
CCTTACACCGTTATGTTTACACGGCGAGGCACTCACACAAGACTTGCACG
TCGACGAGATTTTAGTATTTTTACGTCGACGAGATTCAAGTATTTTCGGC
TGAGTGTGCAGCCAATATACACCCAAAGAGCTTGGTAAGTCGACAACAGA
AGTCACGTTTCATGATTTGGTGACCAACAATACACGATCACAGGCAAAAC
CTTCTCCCTGTAGTCAACAATTGATGGTCGGTGCATTCTGACGACAAAAA
TAACACACGCGCACACGCGCAGAAATATATTATGTTCCGAAGTAATATAC
CTGCGGCGAGCGAAACAACTCCACACCTCGTTCGTCTAGGGGGCGGGGAA
ACCCCATAGTTTTCATATTTTGCTTGCCTCAAGAGGTTTCATGCGACCGT
TCACCACGCATCGCACTCGAGACGGAGCACCGTTCCACTCCGATACCGGA
GGTGACATTACAGTCAAGATACCACACCAACTGAGGAGAGCAAGCGTGAA
CAGGCAGACCTCGTGGCAAGACATGTTTGCGATTGATCTTGATTGCATGC
CTTTTATTTTACTTTTATCATCAACCCCCCCCCCCCCGACTGCCGGTACT
TCCGCTCTTCCATGTATGTATTTTGTCCCTCTTTTTCTCTTCTGTTCTTT
TCCCTTTTCGTTCCCCTGCTTCCTCTTTGTTTGGCGGCCTGTTTGTCGTG
TTTGTGTACGAGTGCACTCCCTCAATCTTTGTGCTCTCCCTGTATCTTCT
TTTTTATGTTTTTGTCTTTCGTCTGTTGATCGTGTAGTTACTGGACCATG
CGCCCTGGTTTGCCTTTGCCTTGGTCTGTCATGGCCCTGGGCCCTGGTTC
GATGTACGAAGTATTTCGAAGTATATATGGTTATGGTTGAGGTTTGTCTT
GTTTTTTTTGTTTGTACTGTTTCCAATTTTTGTTTTTTCTTTCGAACCTG
TTATTTTTTTTCTGTATTTTGTTTGGTACTTTGGTCACCACAGATGGCAC
TCCAACGGTACCCTATCCGATTTAACTGTGGGTGATCATAGTCCAGTTGT
TTTCTTTTTCTTTTTTTCCTCCTAGCACGATATGTGCCTGGTTTGTGACC
ACGGGCTAGACTGCGGCGGAAGTGAGCTAATGTGACAAGCAACAGCAACA
ACAACCCCCTGGACTTTTTCGTCCTACCGTAAAATATTACACTCAAGGTA
CCACACTCCCTGAACTTTTTCTTTCTATAGAACTGTGGGATATTAAACAC
AAGATGCCACACGCCCTGGAATTTTTCTTAGAACCGTGGGATATTACACA
CAAGACATCATACCCCCTAGACCGGCTTGTACAGGTCGATTACTACGTAA
CTTTATTATCGGCGGTGACACTCGTCTTGCTGTGCAGTGAGCAAACCTTC
GGCATGAATCCAGGGGTGTGGTATCGTATGTCACCAACGGTCGGTATATC
ACCACCAACATCTCGGCGCTCTCAACGTTTTTGCCGAAGCTTGGGCAGAA
TTTTACGTTTATGTTACCCTATTCCCTTTCTGTCGTAACGGGGGGGGGGG
GGAGTCGCTGCCGACGTTCTTCCCTTCCTTCAGCGAAAAAGCTCACGAAC
TGATGTCTCCTGTCTTTTTCCCCACTGCCTAACGTGTGTGTGCCTGCCGT
ACAGGAAGCCGCGGCGGCAACATCAACCTCGGGGGCTGTACCGGCGGGGG
CGGGGTCGTCGTCGTCGTCGTCGGCAGCGGCGGCAGTGGAGAGCCCACCG
GTCGCGAAGAGTATGCTGTCAACCCTCACCAAGCGTGTGAGGACCGGGTT
CTTCATGGCGGGTGTGGCGACGGTGTGGATCTTCAGCGGGAACTGGGTCT
TCTCCGTCGGGTTCGCGCTGCAGGCAATGCTGGCGCAGCTGGAGTACTAC
CGGATGGCCATGCAGAAGGGTGAGAAGAGAACATGGGTGGGAGGATGAGG
CAGGACAGCTGGGCAGCAGCGTTTTTTTTTGGGCGGGGGGGGGTGGTTTG
GTTTGTGTGGCAAAGCCTCGGAGGGGGGGGGGGGGGGGTACTTCTTGTGT
TGGTGTGCGTGTACGCGTTGAGACGCGGGCGAGGAGAGGCAAACTCTTTT
GTAGAGCATACCGATGGAGTTCCATACCAAAAGGGGGGCGGTAGGGTACG
GGGGTGGACGGAGGAGGGCGCATCATCTGAGACATGTCTGAAGTGCGCCT
GGGGGGCAACTACTCCTGTTGATGCATAACAATGATGAAACTTGTACCAG
GTAACTTGTGTGATATTTGCTCTGATATGTTGCTACGGACAGGCAGGAAA
CAACCGTCCGCAAGTTTTCAATTTTTGTTTCCGGGAAGTACCGTAAGAGC
AAGAGCAAAATGATCCGGGACGGGTCCACACGGAACGGCGCTCGGTCGCC
TCACGGTGCTGAGCAGAGTCCTCGTGGCTCTATTCCTTTTCCTTTGCATT
TTTTTTGGTATATTTTGTCCCATCCATCGGTTTGGTCGATTTGTTTTGTG
CAGACGCCAAAAAGCGGTATACCGCCTGGTTTCCGCGCCACAAAGCGGTA
CACCAAAATACACCTGGGCATTTGAGCCCCGTTCGCGTCGCTGGTTGGCC
GAATAAGCCTCGTAACGCTTTTTGGCACCACCAGTCGGCGGTACATCACA
TCTGGGCTTCTCAGGTCGGCTGTCACCGCTTTTTGGCGCGACCCGTACCG
CTTTCTGGCGGGATATTCCCCAGGCCATTCGCCCAACAGCCTTTGAAACT
TCCAAATCAGGAACCAACCAAGGAAGCCACGTCACCTAGTTACAGAGCCC
CCCGGCCCTTTGTCGGTGAAGAACCTCTCGGCACGTTCTCCGCGCATTTT
CTCTGCAACCGACCCTTTTGGGACCTTTTACAGCACGCTGGAAGCCGATG
CGTGCTTCTGCGCGGTGCTCTGCAAGAAAGCTGGCAGGGAGACCAAAACA
GCCACTCACTGCTGCTGCTGCTGCTGTAAAACCAGAACAACAGTAGTAGT
AGCAGACCGTGTGCGAACGCGACTCACACCCCCGGCACAAACACACACCG
TGACAAGACTGCCGTCTACCGTGTGAGGCCCCGAAAAATAACTTTGCCAT
TTTTGGCAACAAACAACTTGCAAACAACACGAGTACAGCATATGTGTGTG
AAAAAGTGTATGTATGTGTGTGTGTGAACAAGTCCGGGTCTACCAATACG
CCCGCTGAGCAGGGAATATCATACATACATGCATCCGAGCCTGCCAAATC
AGGTGCATATCATCGTTCGTGTATGTATGTATGTGTGTGTTTGTTTGCGG
GTGCGCGAGTTTTCCCCGTGGTCGGTCTTTTGTTCTGGTAAGGGGCAGCA
CCGTGTGGGTGTGTGTGTTTGTGCCGGGGGTGTGAGTCGCGTTCGCACAT
TGTCTGCTTCTGTTGTTGTTGTTCTGGTTTTACAGCAGCAGCAGCAGTGG
CAATTTTTCTGGCCTTCCTGCCAGCTTTCTTGCAGAGCGACGCAGAAGCA
CGCGTCAGCTTTCAGCAAGCTGTAAGATCCCGAAAGGGTCGGGTGCAGAG
AAAATGCGCGGAGAACGTGCCGAGAGGTTCTTCACCGACAAAGGGCCGGG
GGGCTCTGTAACTAGGTGACGTGGCTTCCTTGGTTGATGCCTGATTTGGA
AGTTTCAAAGGCTGTTGGGCGAATGGCCTGGGGAATATCCCGCCAGAAAG
CGGTACGGGTCGCGCCAAAAAGCGGTGACAGCCGACCTGAGAAGCCCAGA
TGTGATGTACCGCCGACTGGTGGTGCCAAAAAGCGTTACGAGGCTTATTC
GGCCAACCAGCGACGCGAACGGGGCTCAAATGCCCAGGTGTATTTTGGTG
TACCGCTTTGTGGCGCGGAAACCAGGCGGTATACCGCTTTTTGGCGCCTG
CCATTTGTTTTTGTTCTTCGCTCTTGGCTCTTTTTTTTCGTTAATTTTAT
GCCGTGCCCACACGCAGTATGCCCTGCGCCTCCCTTCCGCTCTTCTTGCC
CCTCGTCTTGCGTGCCTTGCGTGCTCTGTCACTGCTGTTGCTGTTGCTGC
TGTTGCTGTTGCTGCTGCTTTCTTCGCTTCAAGGTGTAAAGCCGGCGCGG
CGAATCAGCGCGGTGGCGACGGCCCTGCTCTATTCGTTCGCTGTGGCGTT
TCCCTTCCTCCACAACTACGTCATGGCCAACATAGGATTGTGAGATACGT
TTTGTTTCAGACACACAAGTACATGAAAAAAAAGTCATCAGATACGATGG
CTCCAGAAAGTGTGTGTAAACTATTGTTGTACTCGATGAAAAATATACGA
AGTACTTCGAAGTATATACTCGGAGTATTATATACATAAACGTATTTCAT
ACCAGGTACAGTATAAGACGTGAGCTCATCGCCGTTTCATATGATATGCA
GTTGTTTATTTGCGCCTTCCCTTTCGCACGCGGTTGGCCAATCATCAGGA
GCGCTTTTCAACAACCTATTCTAGTATCAAACACGCCTCACGCCTCTTGA
GGTTCTTTCCCCAACTTCTTGCCGGTTTGGAAGTGCACCCCTTAAAAACA
GCGCGGCCAATCCGACCCAGTCCATTTAATCCTAACCTCCGCTTCTCCCC
CCCCCTTCAACACGGTACGCAAAACTACAAACCGCCTCCTATTTTCATTC
ATGACGTATCCGTAGCTACATCATGTGCTACTTCCTGTTGGTGAGGCGCA
CGCCCGCGACGATCGGAGACATCTCGACGACCTTCATGGGCGTCTTCTAC
GGGGCCTACCTGCCCAGCTTCTGGGTGCGGCTTCGCGCCGTCGGAACGGG
TTTCCCAACGGTTTCTTGGGCGGGGGTGCGGGCGTATTTCCCGCGGTATC
CGGCGTGGGCCCCGGTGCCCGTGCCGGACACGATCACCCAAGTACGTGCG
GCGTGGGACATATGGTCCGTGCTCAACAATTTGTCCAATCACGTTTTGTA
ACTTTTGTTACGGGAAGATTTGGAACTTGAAACAACAATAGTCGTGACCG
CCTCGAAATTCTACGTCGATAGCTGCAGAGTTTTTTTCATTCTGGCGAAA
TGCAAAATTTTGGGCCACATTCAACCACGGGGCCCCCTAATACCCCCACG
CCTCCCCTATACATGTCACGGGGCCCCCAAATCGCACCCCGCACCCCCGA
GATTTGTACTTCGAAGTAGCATTCACGGTGACTTGACTACACATTTTGCA
TCGATACATATTAAACGAACCAACACCACCACCAACATCAACATCAACAT
AACAGAAGAAACCACCACCACCACCGCCACCACCACCAACGACAACAACA
CAGTCGAAAACACGCTCGAATTCTATTGGTTGTTGCGCGACCTCCGCAAA
CGGCAATCTATGATAGAATTCATGTTGTTGTGGTGTAGGGGCGCGCACTA
CAAGTACCTCTAGATAAAACATATGGTCCGTTCTCAACAATATTTCCAAA
AATTCCCCAGCACCCAGGTACACTTTTCTCTGCACACAGGCGGTTGTTCC
GAAATCTGAAAGTACCGGCAAACGGCCCGTCTCCAGGCGCATCTCGTGGC
GGAGAGTTTTTTTTTTTTTCAAAAGCGACTTTTTATCGGCGAAAAACCGG
ATGAACTTGTATTCTTTTTCCTGGGCCATGGTGTTTGCCGATTTCGAAAA
ACTCAACGGATTTGGACAGATCTCGGAATTTGCCAGACGGTGAtTTTTTT
TTTTTTGAAAACATTTGAAATTGACGACGATATCGCCGAAAAACCGGATC
TAGAGGGTCAACTTGTAATGTTTTATTTGAGATAACTGACCGAACGATTT
GAAAACAGACCACGGCAAACGATTCCTCTCATCAATCCCCAGACGATTTT
TTTTATTTTTCCCAGGAAAACTCTGGTTGTGGAGAAAATCGAAATTTTGT
TGTGCCGTCCTGCTGGGAGAAAAAAAGATGAAAAGCAGTGCGCACACGTG
AAGCTGTGCACACACACCACATCACCACATACGCTAGCCACAACGAACAC
ACGCAAGCAACATGCCACGGCCTAAGAAGAAGAGGATCTGTCTGCGGGGA
CCTGGTGGCCAAGTGGTTCGATGTTTGTGGTGTAGTTGGTTATTGGGTAG
GTTGATTGGTCGAGCGCGATGGCTCAGTAACAGTTACTAGGAATTGGTTT
GTGTTGAACGCGTTGGTCGAAATATCTCACCATTTGCTGCTGCCAATGCC
GCCGTTTGGGCATGCATGCTGTTTGTTCGAAGCACTTTTCCGAGACTCGG
GTCAAAACAAACGTAAAGAAGCTTCAATGGACGGGGGTGTTCTGTTTCAG
GAGAGACAACGGTATGGTATTTATAGTCCTTTCTTGCACTTTTGGTGTGC
TGGACATGCATGCTAGGGGGGGTCCGTATGAAAACACACTGCGGCGAGGT
CTGTTGCTTGTTGTGCTTCGGATTGGGTCACCCTTCACGGGAAATTCGAC
GCCAAATGTGTGTTTTGGTTGGTGTTGGGTAGAGTGAGCACGACAGCGTC
TCAACCGTGCAACACGTGAAACCCTCCCCAACAATCCTCACTTTCCCCCG
AACGTGAAAAAACGAACAGGGCGCCTTGATAACGTGGTGGACGTACAACA
GTATCGTGGCCGCGGACGTGGGCGCGTACTTCGTCGGCAAGTCTCTGGGG
AAGACCAAGCTGTCGGCGGTCAGCCCCGCCGCGGGATACGCCTCTCCCAA
CAAGACTATCGAGGGTCTCCTGGGAGGCCTGGCGGCGTCCTCGCTCGCGG
CCACCCTCGGCGCCCGCCTGCTCAGATGGCCGGCGTGGTGGGCCACGGGA
CCGGCTTACGGCGCCATGCTGTGCCTCGTGGGCCTGGTGGGAGACCTCAC
GGCGTCGGTGTTCAAGCGGGACGCCGGTTTCAAGGACTCGGGGAGCTTGC
TGCCCGGGCACGGGGGGTACCTGGATCGCGTCGACAGTTACATTTTCACG
GCGCCCCCGGCTTACCTGTTTGTCATGTACGTTCTTCCTCTGGCTGCGAA
GCTTGCGGTGAGTTTTTTTAATCTGTTTGTCGGTTGGTTTTGTTTTTTTC
GGGGGCGGGAGCGAGAGTGTTGGGGGAATGGAAGGTTTCCAAGGGTGATT
TCTCGTCCGCGTGACCGGCAGCCCCCACCGGAGTGCCGGTAGGTGACGGG
CTTATGATGATCAGCCGCGTTGACGTTAAGCAACTGCAAGCCTGTCGTTG
CCTGATTCATTGTCGAAACGACAGCCTTTTGCCGCTACCAGAGGTTTGAG
CACCCGACTCGAAGCTTTCAGGGCTTGCATCCGGTGTCTTGTTGTCTTGT
GCTGGAAGGCATTTCCGCGATCGTTTCGCGGAAAAGACGGGCAGGCAGGG
ATGAGACCGAAAGGACGCTCGAAGTATATGCCTCGAAGGAGGGACTGGAG
CTCCCGACTCGAGTTTGCCGTGTTCTGCGGGTATACCGTAGAACCCCGTC
CCACTGCATAAGACACGCCGGATAGGAACCAACCACGTTCAGAAACCGTT
AGAATGTCACCGGTACAGATGAACATTTGGAATTACGATCCAGTTAAGTA
TTTTGGTGTCGAATTGATTTTTAGTGCTACACATACATAAGTTGTACATG
TGAATACGCAGCAGCGAACGTTGGCTGAAACGATTTGCTGGATTCTAGTG
GTGCGCGTGGGTGTAAATTGCTTGCAGCGAATGGTGGTTCCGAAGGGGCT
AGAGTGCGTGGTGCATGCAGGACCTTCTTAATTCCCCCTGTTTTTTTTTT
TTGTTGCCGTACCGTCGACTCCCCAATGACCCTCCGGCAGGCGGGTGGCG
GCTAGAATGAGGCGCTTGAGTGCAGGGGGTGTCCGACGGACCATCCCATC
CCCCGAACGCGCATGGGATAGGCCTCGGGTGATACACGCATGAAGCAAAC
GATCATCACGTACAGGGGGAAGCGAAAGTCTTCCCCCCCCCCCCCTCCCG
CCCCGGTACGGGACGACGGCGAAAGCAGGAGCCAGGGAATGACAGGGGAT
GCAGAACTGAATTGATGATGCCCTGTACGTAACCGCTCCCTTGTTCGTTG
TTGTCGGGTATTCGTCGACATCGTCGTCGTCGTCGTCGATCGTAGCAGCA
AAAATCGGACAGTCATGCAATGGTTTCGGGTTTGACACCTTTCGAGGAGC
GACGAAGGCAAGATCTTCACTACCGGGGTCGACGAATATGCTGAGTGCTC
CGATGAGGATAGGAGAGGGCGGGTCGCCGTGGGCAATGGTTTTCAATTTT
TTCGGTTGCCTGCATTGAACGTTCGTTTGCAGATTTGTTCTCAGTGTCCT
TTTTTCTTTTCTTTTTTGTTCTTTTTGCCTGTCACATCACACTTGTTTCG
ATGCTGAGTTCATTTTGCGTGCCGAGCATCCCTTAAAGTTTTACGCTCGT
TAGGCGGGAGAAAATTCGGTGATGATGTGCTTCCGAAGACGTTGGGCCCA
GTCGATAAGGCTGCCGTCATTTTTGAAAGCTGCGATTCCTCCCTCTCCCC
CACCCTCGAGATAGTCGCCGTGTTTATTCGACATGTTCTTCTCTCCACCT
GGAGGATTTTCCTCACTCTTTGCGTCGAGATATTCGCTGGTATCGCCTGT
AATACATAGTTGAAGACGGGACCGGACGACACGTCTGGGAACCTTTGCGG
TGCCCTTCACTTACGTGTAGCAGACATGCGGTCCGTGGGTCCGGTTTCAA
GGGAGAGGCCGCTGTTGCCCAAGTACTGCTGTGTATCGATCCTTTCCCAC
GGCGGGGGGTGTTTTACTCGAGGGCGTATCGGGAAATAAATGCCGAAACC
GTCCCCGCATTTTTTTGTCGAGTTGGCTTATCTACTCGTATCGATGGTTG
GTGTCGTATGATACACGGCAGAAGAAGAAGTAGTCCTTTTTTCGCTGCTT
CTGTGTTGGAGGAGGAAGATAAGTTGGTTGGGGTAAGAGGGAGGCAGGTA
GGATCGTTCGTTTTGTCTTCGCGATTCCGTGTTGGCTTCCTGCGACCACG
GACAGTGCGACGTATTTGGAGAACGCACCAAAACCAACTTACAACACATA
CATAAGTGCCATACGCGCGTCCGTAACAACAAAATATTCGTCGCATTTCC
GTGTCTCTTGTTACCACGCGCAAAGAAAGGTACGACAAAGCGTTTGGTTT
TTCGCCAGGATCTACTGCTGTTTAGCAAGCAGGCGGTCCTGTTTCGAATT
TGTACTAAATAGCAGGTAAATAAATGTGTAACGTTTAACAAACAGGGTCG
TTAACGGCCGAACCGTGGTATCGGCATTCACGGCGGGTGCAAAAGTACCT
ACTGCTGTTCATTCCTCCCACCCGCGAATGCTCTTGTGGAATAGCAGTAT
ATAACTCGAGTCGACCGAACCGTATTTACAAGTACTGGATGGGGGTGTCC
GCGTGGCGTTTGGGAGTTGGAGTCTGTATTTCTTCAGCT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1140:27644..43382+ >mRNA_P-littoralis_Contig1140.12.1 ID=mRNA_P-littoralis_Contig1140.12.1|Name=mRNA_P-littoralis_Contig1140.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2064bp|location=Sequence derived from alignment at P-littoralis_Contig1140:27644..43382+ (Pylaiella littoralis U1_48)
ATGGCTCATGCATGGGCTACCGGTCGATGCTCACACAGCACAGCCATGAG
TTTCCGCCTTGTTCTGCAAGCCTCCGCACTGCTGCTGCTGGCCGGTAGAG
CACACAGCTTTTGCCTGGGGCCTTCAAAAGCACGCGGGGGGCACCGAGGG
CAACAGCACGGGGTCAGCCGACATACTTCGTCATCGCGACCGTTCGGCGT
CGTCTACGGCGGGAGAGGCAGGGATGGCGGCGGGGGGATAGCGGCCAGTC
GATTACCCCAACACCCACAACAACAACGGCAACAGCGGCCGAGACCATCG
TCGGTGTCGATGGCAGTGCCGCGGACATACCGGCGGCAGCGGGCACCGAT
GGTACCCACTGCTCCCACAACATCGGCGCCGACGATGATGTCAGCGGAGA
CGGGGTCGGAAGCCTCTGGTGCCGAGAGCGCGGCGGCGGGTGGCGAATAC
GTCATCGGTGGTGAAGGCGCTGACACTGGCGGCGGTGATGGCGGTGTTGA
AATCCCCGAGGATCTGGCCGTAGCGGCAGCGCCAGCAGCAGCATTAGCGG
TAGATGGCGCGGAAGCGGCAGCAGCGGCAGCAGCAGCAGCGGTGGCGGCA
GATGGTGCTGAACCGGCAGCAGCAGCAGAAGCTGAGGCTGCTGCTAACGT
CGCTGTCGCCGCCGCCGCCGCTGCTGCCTCCGTGCTGCCTAGCGGGGGGA
AGGAGTTCGTGAGCAAGGAGCACCGGAGAGCCGGGCCGTTCAAGGCCGTA
CTGCTGTACCTGGACTACGTGCGCTGGCTGTGGGACGTGACCGACAAGGA
ACGGCTCGACCGGGAACAGCCGCAGGGCATGGTGTCAGAGAGAGTAAAGA
CGGTGCTTTCGGGGGTCGAAGACCTTGGGCGAGAGGCCGGTGTAAGCCTT
CGGGAGAGCAGCGTGAAGCCGCAGTTCGAGGCGTTGGTGTCAGCTTCGGA
CGCGCTCAAGAAAGCGCTCGCGAGCGCCAAGATTAATAAGCCGGACAGCG
CTCAGGAAGCCGCGGCGGCAACATCAACCTCGGGGGCTGTACCGGCGGGG
GCGGGGTCGTCGTCGTCGTCGTCGGCAGCGGCGGCAGTGGAGAGCCCACC
GGTCGCGAAGAGTATGCTGTCAACCCTCACCAAGCGTGTGAGGACCGGGT
TCTTCATGGCGGGTGTGGCGACGGTGTGGATCTTCAGCGGGAACTGGGTC
TTCTCCGTCGGGTTCGCGCTGCAGGCAATGCTGGCGCAGCTGGAGTACTA
CCGGATGGCCATGCAGAAGGGTGTAAAGCCGGCGCGGCGAATCAGCGCGG
TGGCGACGGCCCTGCTCTATTCGTTCGCTGTGGCGTTTCCCTTCCTCCAC
AACTACGTCATGGCCAACATAGGATTCTACATCATGTGCTACTTCCTGTT
GGTGAGGCGCACGCCCGCGACGATCGGAGACATCTCGACGACCTTCATGG
GCGTCTTCTACGGGGCCTACCTGCCCAGCTTCTGGGTGCGGCTTCGCGCC
GTCGGAACGGGTTTCCCAACGGTTTCTTGGGCGGGGGTGCGGGCGTATTT
CCCGCGGTATCCGGCGTGGGCCCCGGTGCCCGTGCCGGACACGATCACCC
AAGGCGCCTTGATAACGTGGTGGACGTACAACAGTATCGTGGCCGCGGAC
GTGGGCGCGTACTTCGTCGGCAAGTCTCTGGGGAAGCGGCGTCCTCGCTC
GCGGCCACCCTCGGCGCCCGCCTGCTCAGATGGCCGGCGTGGTGGGCCAC
GGGACCGGCTTACGGCGCCATGCTGTGCCTCGTGGGCCTGGTGGGAGACC
TCACGGCGTCGGTGTTCAAGCGGGACGCCGGTTTCAAGGACTCGGGGAGC
TTGCTGCCCGGGCACGGGGGGTACCTGGATCGCGTCGACAGTTACATTTT
CACGGCGCCCCCGGCTTACCTGTTTGTCATGTACGTTCTTCCTCTGGCTG
CGAAGCTTGCGGCGGGTGGCGGCTAGAATGAGGCGCTTGAGTGCAGGGGG
TGTCCGACGGACCATCCCATCCCCCGAACGCGCATGGGATAGGCCTCGGG
TGATACACGCATGA back to top
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