prot_P-littoralis_Contig1140.9.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1140.9.2
Unique Nameprot_P-littoralis_Contig1140.9.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length533
Homology
BLAST of mRNA_P-littoralis_Contig1140.9.2 vs. uniprot
Match: A0A6H5K7G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G4_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 4.520e-74
Identity = 231/505 (45.74%), Postives = 282/505 (55.84%), Query Frame = 0
Query:   22 VLRCLGPLEWIKCASVCPAWRDTILGGXXXXXXXXXXXXXXXXXXXXXXXPVASASP--VVLPSTGRAMSTAGAEGVTTTP---------SEEGAXXXXXXXXXXXXXARVATADLWCEFAVSAMQYRDPCATAHIGDNNGEGNINTNSSXXXXXXXXXXXXXXXTTGVTRCRG-RASPCSHRTFAPREFYRNVCLEGDPIVLGPPLRATAARIGGKTAGRGEVSVAKVSLTDVAAASAARCRHPRAFTEFLLQWNRHRYC--RATAVTKIKSFRNYLQFTHHSLLCEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--MLNEALSVFTRLFVLCRRCRRPQTALFATEDNGARPFSAPRSGGSSSAYNGGGKSPAILAPSLAPSGSPRYEGWGVTLWVECQGEGCGLTSRVGGSGAXXXXXXXXXGPSPWLVKFSRYVLRRGWKDINTLDEDHGTEWFSDTSPAGVRRRQDEARASSIGLEALARRGS-GGDGD 509
            +LRCLGPL W+ CASVC  W D IL                           AS +P  VV+P+  +  +TA   G TT+P         S+ GA               V   DLW EFAV+ ++Y  P     + D +  G+  + S+                T   R +  RA     R  A   F+R+VCLEGDP VLGPPLRAT A  G  T GR E ++A VSL DV+ A+ AR R PRA  +FL  W R+     R T V  I+   N +QFT+ S    +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +L+EAL VFT+LFVLC RCRRP T LFA +D+ +   +   +GG  SA    G++ A++         P   G  VTLWVECQ + CG  S +    +    XXXXX P PWL KF+RYV  R WK INTL EDHGTEWFSDTSPA V+RR +EARA+S+GL+ALARRGS GGD D
Sbjct:    1 MLRCLGPLSWLHCASVCSGWSDAILSRKPKTARGPAALAVAGEPTSGG----ASTAPAIVVVPAGEQETATAPTSG-TTSPAADRTEASISDGGAEAVNGKEKAAAAATAVVKTDLWREFAVTVIRYNGPA----VADRDIGGSGTSGSNCPTCSFGQNHRYHHNLTRDRRSKPLRALHPPSRGGAHGHFFRHVCLEGDPTVLGPPLRATIAASGSGT-GRRETAIATVSLADVSKAAEARFRRPRALIKFLWLWIRYSNTEHRLTTVPTIELTPNNIQFTYKSPCGRRRGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSEALGVFTKLFVLCHRCRRPCTTLFANQDDASN-VAQNVAGGKESA----GRTAAVI---------PEVRGRRVTLWVECQEDWCGWRSGM----SVAAGXXXXXAPPPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQRRLNEARANSVGLDALARRGSDGGDSD 477          
BLAST of mRNA_P-littoralis_Contig1140.9.2 vs. uniprot
Match: D7FLN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN6_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 4.530e-23
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0
Query:  443 PSPWLVKFSRYVLRRGWKDINTLDEDHGTEWFSDTSPAGVRRRQDEARASSIGLEALARRGS-GGDGD 509
            PSPWL KF+RYV  R WK INTL EDHGTEWFSDTSPA V+RR +EARA+S+GL+ALARR S GGD D
Sbjct:   13 PSPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQRRLNEARANSVGLDALARRESDGGDND 80          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1140.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7G4_9PHAE4.520e-7445.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLN6_ECTSI4.530e-2375.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1140contigP-littoralis_Contig1140:20941..23485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1140.9.2mRNA_P-littoralis_Contig1140.9.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1140 19333..24295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1140.9.2 ID=prot_P-littoralis_Contig1140.9.2|Name=mRNA_P-littoralis_Contig1140.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=533bp
MDVDHFTATQTALRIPELLTSVLRCLGPLEWIKCASVCPAWRDTILGGGD
DQAKQHRPEEAAAAAASATTTPVASASPVVLPSTGRAMSTAGAEGVTTTP
SEEGAGEGETTVTVAVAAARVATADLWCEFAVSAMQYRDPCATAHIGDNN
GEGNINTNSSSACCSGRIHRRHHHHTTGVTRCRGRASPCSHRTFAPREFY
RNVCLEGDPIVLGPPLRATAARIGGKTAGRGEVSVAKVSLTDVAAASAAR
CRHPRAFTEFLLQWNRHRYCRATAVTKIKSFRNYLQFTHHSLLCEKKKGA
KGGSSASSSSCSSSMSGRGKAASPSSKCCATTTAMLNEALSVFTRLFVLC
RRCRRPQTALFATEDNGARPFSAPRSGGSSSAYNGGGKSPAILAPSLAPS
GSPRYEGWGVTLWVECQGEGCGLTSRVGGSGAAGSGGSGGTGPSPWLVKF
SRYVLRRGWKDINTLDEDHGTEWFSDTSPAGVRRRQDEARASSIGLEALA
RRGSGGDGDRRGGDGGDIASGNSQSSSSSDGD*
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