prot_P-littoralis_Contig114.67.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig114.67.1
Unique Nameprot_P-littoralis_Contig114.67.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length650
Homology
BLAST of mRNA_P-littoralis_Contig114.67.1 vs. uniprot
Match: A0A6H5L7Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q0_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 6.590e-49
Identity = 223/630 (35.40%), Postives = 279/630 (44.29%), Query Frame = 0
Query:    5 WERLLSST----PEATSWPPGFVSATIPPVSPARRRVLNNKHWATATFPSSSRSTTSTCGTTVSDLPSVRAKRRPSVLGGGFSTKAVPLSSLEIFSCCPWSENNTKTKPG---------RRG--LTTRTSRRSPESXXXXXXXXXLGHEADDGTATLTTEMSVVGWGDRA-RRRSSQRASRIEAAEWEDGRPRKLSAQGVVLATAA--------------GTAIDPRQQXXXXXXXXXXXXXXXXXXXTKGEHSVRQTHVAVDNDEHDDDGSTKSMGSISVMERALEISATCPQTAPPXXXXXXXXXXXXXXXXXXXXXXXXXQVGQTAFGSLTRPAASSASPRGISQKDSLVTSPPDSNGALAKAATAPTPPRVDEAAPPPDNHNIGVGSRYLEMXXXXXXXXXXXXXXXXXGPRRGWRAE---AEFSNQAGATAAAAGRTRLLSIEDAGAG-KVFHNFVFRRTKKSS----LVDDSSAFASWDDNTAEWSSAAGTNG----RLGGPRSTGRSGGSI-GSNVGAMPS-LRHQRSWETPCSMDWHRPGCSGQTKRTCLPLRTASDAFAVQSFESAKSDKGRSDKGSGGGRCCFGGPGNN----RPVKCQRCGSGRVHLFATTLSSANSWP 586
            WERLL S+        SWPPGF     P  SP   R   NK+          RS  S+  ++V+   S   KRRPSVLGGGFST     +S        W E++T  K G         R G   T + SR      XXXXXXXX     D    T +TE++VVGWGDR+ RR SS+RASR E AEW DGRPR+LS++GVVLAT                GTA +  Q                         S+      V N    DDGS  S   ISV ERA EI  T P   PP                             T+  S+ +P+ +  +P  ++ K S  +    S G    A +A TP R+  AA  P+   +G  +   +                   PR+ WR E   A   ++AG   AA G      +   G G KVFHNFVFRR K+      L D     AS DDN  ++ + A   G    R  G R  G S  S  GS+V    S LR +++WE+  S DW RP   GQ  RT  P R   DAF+V SF S+ S +         G+   GGP ++    RPVKCQRCGSGRV LFATT++SA   P
Sbjct:    4 WERLLLSSLSGGEPVNSWPPGFGDVARPLASP---RHTQNKN----------RSLVSSASSSVASTASRVRKRRPSVLGGGFSTAGSCAASSPNSIQGSWIEDDTDPKAGPCWQQRDADRVGHPATRKGSRSDGHEDXXXXXXXXXXXXEDHDKKTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXQQYDGTANETHQVEAGVRNKVKTLGGAAT--------SIGTAIAYVGNGS--DDGSGVS---ISV-ERATEI-VTIPTITPPPFRGWQQAAPNAAA------------AAATSIHSVAQPSPTRETPGIVTLKVSSQSPASKSAGEGVSAKSAMTPTRMGLAASAPNLPTLGSMNNESDQRSSGSVSRFPQVL-----PRQRWRQEGRGASVRHRAGLAVAAGGGLEGCGVLQDGRGQKVFHNFVFRRNKRRKDRKPLRD---TLASLDDNATDYQAVASAGGISGRRAAGRRCGGHSSSSCSGSSVEMTESSLRRRQNWESHPSGDWDRPERPGQMNRTRPPPRMPRDAFSVVSFSSSGSARSPCSSPPANGQRVGGGPCSSGVGRRPVKCQRCGSGRVKLFATTVASARRSP 585          
BLAST of mRNA_P-littoralis_Contig114.67.1 vs. uniprot
Match: D7FXN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN3_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 3.210e-36
Identity = 195/558 (34.95%), Postives = 231/558 (41.40%), Query Frame = 0
Query:   72 KRRPSVLGGGFSTKAVPLSSLEIFSCCPWSENNTKTKPG---------RRGLTT-RTSRRSPESXXXXXXXXXLGHEADDGTATLTTEMSVVGWGDRA-RRRSSQRASRIEAAEWEDGRPRKLSAQGVVLATAAGTAIDPRQQXXXXXXXXXXXXXXXXXXXTK-----GEHSVRQTHVAVDNDEHDDDGSTKSMGSISVMERALEISATCPQTAPPXXXXXXXXXXXXXXXXXXXXXXXXXQVGQTAFGSLTRPAASSASPRGISQKDSLVTSPPDSN----GALAKAATAPTPPRVDEAAPPP------------DNHNIGVGSRYLEMXXXXXXXXXXXXXXXXXGPRRGWRAE---AEFSNQAG-ATAAAAGRTRLLSIEDAGAGKVFHNFVFRRTKKSSLVDDSSA-FASWDDNTAEWSSAAGTNGRLGGPRSTGRSGGSIGSNVGAMPSLRHQRSWETPCSMDWHRPGCSGQTKRTCLPLRTASDAFAVQSFESA------KSDKGRSDKGSGGGRCCFGGPGNNRPVKCQRCGSGRVHLFATTLSSANSWP 586
            KRRPSVLGGGFST     SS        W E++T  K G         R G    R   RS     XXXXXXX          T +TE++VVGWGDR+ RR SS+RASR E AEW DGRPR+LS++GVVLAT           XXX                 K     G  +   T +A      DD        SISV ERA EI AT P   PP                         Q GQ A  +      S A P    +   + T  P S     GA AK+   PT  R+  AA  P            D H+   GSR+ ++                  PR+ W  E   A   ++AG A AA  G      + D G  KVFHNFVFRR K+        A  AS DDN  ++ +A    G  G                      R    W         RP   GQ  RTC P RT SDAF+V SF S+      +S    + + +GGG C  G     RPVKCQRCGSGRV LFATT+ SA   P
Sbjct:   24 KRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAGPCWQQRDAGRVGHPAIRRGSRSDGHDDXXXXXXXXXXXXXXXXXTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXXXYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVGSGSDDGSGV----SISV-ERATEI-ATIPTITPPPF-----------------------QGGQQAAAAAATSIPSVAQPSPAGETPEIGTQSPASQSAGEGASAKSGMTPT--RMGLAASAPNLPTLGSMNNESDQHSSRSGSRFPQVL-----------------PRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGGQKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRG----------------------RRAAGW---------RPERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGV--GRRPVKCQRCGSGRVKLFATTVVSARRSP 500          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig114.67.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7Q0_9PHAE6.590e-4935.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXN3_ECTSI3.210e-3634.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..222
NoneNo IPR availableCOILSCoilCoilcoord: 367..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..650
NoneNo IPR availablePANTHERPTHR13270PROTEIN C20ORF116-RELATEDcoord: 180..411
NoneNo IPR availablePANTHERPTHR13270:SF4PHD ZINC FINGER-CONTAINING PROTEIN-RELATEDcoord: 180..411

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig114contigP-littoralis_Contig114:425445..429689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig114.67.1mRNA_P-littoralis_Contig114.67.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig114 425445..429689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig114.67.1 ID=prot_P-littoralis_Contig114.67.1|Name=mRNA_P-littoralis_Contig114.67.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=650bp
MSYSWERLLSSTPEATSWPPGFVSATIPPVSPARRRVLNNKHWATATFPS
SSRSTTSTCGTTVSDLPSVRAKRRPSVLGGGFSTKAVPLSSLEIFSCCPW
SENNTKTKPGRRGLTTRTSRRSPESDNNDDDDDDLGHEADDGTATLTTEM
SVVGWGDRARRRSSQRASRIEAAEWEDGRPRKLSAQGVVLATAAGTAIDP
RQQQQQQQRQQQQQQQQQQQQQTKGEHSVRQTHVAVDNDEHDDDGSTKSM
GSISVMERALEISATCPQTAPPPPLSKSPLTQQQQQQQQQQQQQRQQQVG
QTAFGSLTRPAASSASPRGISQKDSLVTSPPDSNGALAKAATAPTPPRVD
EAAPPPDNHNIGVGSRYLEMQQQRQRQQQQQQQQQQQGPRRGWRAEAEFS
NQAGATAAAAGRTRLLSIEDAGAGKVFHNFVFRRTKKSSLVDDSSAFASW
DDNTAEWSSAAGTNGRLGGPRSTGRSGGSIGSNVGAMPSLRHQRSWETPC
SMDWHRPGCSGQTKRTCLPLRTASDAFAVQSFESAKSDKGRSDKGSGGGR
CCFGGPGNNRPVKCQRCGSGRVHLFATTLSSANSWPGLLHHHPSSRGTSS
RRNNKHPGWAAAQHHFNRASPAGGGGRGGSSRRSSGSIGRRSLAPIDNSH
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