prot_P-littoralis_Contig114.54.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig114.54.2
Unique Name	prot_P-littoralis_Contig114.54.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	367

Homology

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BLAST of mRNA_P-littoralis_Contig114.54.2 vs. uniprot
Match: A0A6H5L6Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y5_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 6.240e-90
Identity = 190/292 (65.07%), Postives = 213/292 (72.95%), Query Frame = 0

Query:   85 SPAEPLARATRAAPRPRGGRAVPACTSDNPMDEVQCEGENKHLSSGSRRGSNMLGFFSTVACSSAFPRSASAAXXXXXXXXXEVVGDAGGGEMGARLDAPAAISFGAVVVAFAFLQARIRTAVRARTARRDYEVLFKGMKSKQLAGQADEEEVALVEECMSQLLREEQEARMVDIFGIPFNLVIPDGGAGGEQGTGAREAQQGRT------GAGSTSAGKAGSD----GIREVMRAKTESDLRDGKAREEEMSPGATLKVAALWLVLISQLWLLLVLWNDPMGPATSAFLKD 366
            +P  PL R         G R+     S  P  E + EG N+ + S +R G  +   F   ACS AFP  +     XXXXXXX +VG+AGG EMGAR+D  A  SF AVVVAFAFLQ+RIRTAVRARTARR+YEVLFKGMK+KQLAGQADE+EV LVEE MSQLL+EEQEAR VDIFGIPFNLVIPDGGAGGE GT AREAQQGR+      G G  +AG+ G      GIRE M+AK ESDLR  KAREEEMS GATLKVAALWLVLISQLWLL+VLWNDPMGPA+S FL+D
Sbjct:   70 TPMRPLTRGRATFASRAGERSSATRMSSAPSGEGRREG-NRVVGSIARGGDVVA--FVAAACS-AFPSCSX----XXXXXXXXIVGEAGGSEMGARVDPAATASFAAVVVAFAFLQSRIRTAVRARTARRNYEVLFKGMKAKQLAGQADEKEVKLVEERMSQLLQEEQEARKVDIFGIPFNLVIPDGGAGGEPGTAAREAQQGRSSGRGELGDGGRAAGEGGQQQQQLGIRETMKAKAESDLRGRKAREEEMSTGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 353

[Close]

BLAST of mRNA_P-littoralis_Contig114.54.2 vs. uniprot
Match: D7FXN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN2_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.390e-27
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0

Query:  303 GIREVMRAKTESDLRDGKAREEEMSPGATLKVAALWLVLISQLWLLLVLWNDPMGPATSAFLKD 366
            GIRE M+AK ESDLRD KAREEEMSPGATLKVAALWLVLISQLWLL+VLWNDPMGPA+S FL+D
Sbjct:   71 GIRESMKAKAESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 134

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig114.54.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig114.54.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L6Y5_9PHAE	6.240e-90	65.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FXN2_ECTSI	2.390e-27	87.50	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig114	contig	P-littoralis_Contig114:364492..369368 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig114.54.2	mRNA_P-littoralis_Contig114.54.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig114 364338..370385 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig114.54.2 ID=prot_P-littoralis_Contig114.54.2|Name=mRNA_P-littoralis_Contig114.54.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=367bp
MTMTMTMTMLSTRWVWLLMMCWSATADTLPPKTTPTTTLTHSPASPAFLA
PTSFNHHHCHHQQQQQQQHHHQLLGSKPILIRDRSPAEPLARATRAAPRP
RGGRAVPACTSDNPMDEVQCEGENKHLSSGSRRGSNMLGFFSTVACSSAF
PRSASAAVAAAAAAAAEVVGDAGGGEMGARLDAPAAISFGAVVVAFAFLQ
ARIRTAVRARTARRDYEVLFKGMKSKQLAGQADEEEVALVEECMSQLLRE
EQEARMVDIFGIPFNLVIPDGGAGGEQGTGAREAQQGRTGAGSTSAGKAG
SDGIREVMRAKTESDLRDGKAREEEMSPGATLKVAALWLVLISQLWLLLV
LWNDPMGPATSAFLKD*