mRNA_P-littoralis_Contig114.49.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: D7FXM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM9_ECTSI) HSP 1 Score: 368 bits (944), Expect = 5.000e-125 Identity = 179/253 (70.75%), Postives = 202/253 (79.84%), Query Frame = 1
Query: 262 MPSPAFGAFFEIFSEGVVLTVGTITTICFAERCWKRSAPLNVTGLLAGIVAVFYSVYALTYWFNGISG-YDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGPRCAMTFNLPSFRLKWIAQFVNQTFQAWMSGGTFVYPLILHLKIMEAGPAKTSQVDSVFATLVFGLAVLDNAVSLGAIIFAVHLPSFTGELPTRREGAPNTIANSNLSR 1017
MPSPAFG FFEIFSEGVV TV IT++CF ERCWKRSAPLN+TGL A ++AV YSV+AL YWFNG+ YDC TLAAVNGT MSASNA TFLHLFVKADASN+ NPKWR FYRWVG+A T FNW TL VVHA+L GTE+DGLDGPRC TF + SFRLKWIAQF+NQ FQ FV PLI+HL++M PAK+S+VD+VFATLVF LAVLDNAVSLGAIIFAVHLPS T E + + T+ SN+SR
Sbjct: 1 MPSPAFGLFFEIFSEGVVFTVALITSVCFGERCWKRSAPLNITGLAASLIAVSYSVFALEYWFNGLGDLYDCATLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLQGTEIDGLDGPRCKFTFEMNSFRLKWIAQFINQAFQV----AAFVGPLIVHLRMMARSPAKSSEVDTVFATLVFPLAVLDNAVSLGAIIFAVHLPSMTRETTDGAKESDVTVTGSNISR 249
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A6H5L5W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W9_9PHAE) HSP 1 Score: 241 bits (615), Expect = 1.350e-75 Identity = 129/222 (58.11%), Postives = 145/222 (65.32%), Query Frame = 1
Query: 466 YDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGPRCAMTFNLPSFRLKWIAQFVNQTFQAWMSGGTFVYPLILHLKIMEAGPAKTSQVDSVFATLV---------------------------------------FGLAVLDNAVSLGAIIFAVHLPSFTGELPTRREGAPNTIANSNLS 1014
Y CTTLAAVNGT MSASNA TFLHLFVKADASN+ NPKWR FYRWVG+A T FNW TL VVHA+L GT+VDGLDGPRC TF + SFRLKWIAQF+NQ FQ FV PLI+HL++M PAK+S+VD+VFATLV F LAVLDNAVSLGAIIFAVHLPS T E R + + T+ SN+S
Sbjct: 2 YSCTTLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLEGTQVDGLDGPRCKFTFEMNSFRLKWIAQFINQAFQV----AAFVGPLIMHLRMMARSPAKSSEVDTVFATLVKKALIASGVSLLFTLIVTVLAFTKMQDMKNGTNKYLIPVFPLAVLDNAVSLGAIIFAVHLPSMTRETTGRDKESAVTVTGSNIS 219
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A0L0FGU8_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FGU8_9EUKA) HSP 1 Score: 152 bits (383), Expect = 1.900e-39 Identity = 103/270 (38.15%), Postives = 136/270 (50.37%), Query Frame = 1
Query: 277 FGAFFEIFSEGVVLTVGTITTICFAER-CWKRSAPLNVTGLLAGIVAVFYSVYALTYWFNGISG-YDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGPRCAMTFNLPSFRLKWIAQFVNQTFQAWMSGGTFVYPLILHLKIMEAGPAKTSQVD---------------------SVFATL-------------------VFGLAVLDNAVSLGAIIFAVHLPSFTGE 960
F FE + G+ L V T T F ER +N++GL AG +AV YS+YALT F GIS ++CT L A+NGT MSASNAL F HLF K ASN+++ W+ + +W+G +TVFNW TL VVHA++ GT + G C F SF LKW AQ +NQ ++ G F+ PL ++ + + D S+ TL VFGLAVLDNAV+L I AV+L T +
Sbjct: 5 FVPLFETAALGIALFVSTTVTCTFLERYITSNRGVVNLSGLAAGCLAVVYSLYALTVTFAGISDDFNCTVLQAINGTCMSASNALCFGHLFFKVYASNKNSSSWK-YTKWIGGFSTVFNWVTLIVVHALVEGTTQEDCGGLTCVFKFEKISFHLKWAAQLINQ----FVMGYLFLRPLCNNIVVRHRDRPNSRWGDLFTTSDTRIQLMTRSVVAISISILFTLAVTVCVWVKLAEGPNVVIPVFGLAVLDNAVNLYTIALAVNLTIATDD 269
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: D8LTM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM0_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.820e-33 Identity = 96/282 (34.04%), Postives = 137/282 (48.58%), Query Frame = 1
Query: 262 MPSPAFGAFFEIFSEGVVLTVGTITTICFAERCWKRSAPLN----VTGLLAGIVAVFYSVYALTYWFNGISGYDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTG--TEVDGLDGP-RCAMTFNLPSFRLKWIAQFVNQTFQA-------------------WMSGG-----------------TFVYP-LILHLKIMEAGPAKTSQVDSVFATLVFGLAVLDNAVSLGAIIFAVHLPSFTGELPTRR 975
MP+P F A FE+ + G LTV ++ F R + S + V+GL A ++ +F + L YWFNGI GYDC + V G S+SASNA+ F+HLF+ +++ +R+N +W++F RW+G+ TVF+W L + T E G G RC + + +KW+AQ +NQ FQ SGG T + L L + I AG A + T VF + VLDN V+L AI +AVH +G P RR
Sbjct: 1 MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLAAALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHF-RWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVHRRYSSG--PIRR 279
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.160e-29 Identity = 70/157 (44.59%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 277 FGAFFEIFSEGVVLTVGTITTICFAERCW-KRSAPLNVTGLLAGIVAVFYSVYALTYWFNGISGYDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDG--LDGP-RCAMTFNLPSFRLK 735
F A+ EI+S V VG TT F R + K A +N+TGLLA ++ +F+S +A+T WF G+ C + VNG +S+SNAL F+HLF+KADASN+ NP+W +R I + V NW L VVHA++T E L G RC TF +F+LK
Sbjct: 7 FPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWP-VWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A835Z0Y4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y4_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.810e-29 Identity = 81/250 (32.40%), Postives = 124/250 (49.60%), Query Frame = 1
Query: 262 MPSPAFGAFFEIFSEGVVLTVGTITTICFAERCW-KRSAPLNVTGLLAGIVAVFYSVYALTYWFNGISGY-DCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGPRCAMTFNLPSFRLKWIAQFVNQTFQAWMSGGTFVYPLILHLKIMEAGPAK---TSQVDSVFATLVFGLAVLDNAVSLGAIIFAVHLPSFTGELPTRREGAPNTI 996
M AF E+ + GV+ + TT+ F R + R +N + LA +A+ Y+ Y YWF G+ Y DC ++ V G A N++ FLHLF +ADA N NP+WR + R + + NWA LG V EV+G DG RC L FR+K++ Q VN Q+ FV+PLI+H+++++ G TS +V+ + + S+ II V + + +R+G P T+
Sbjct: 1 MALTAFKCLLEMAALGVLFCISLQTTLVFGNRYFFYRRVWMNFSAFLASALALTYAAYKTGYWFAGLGPYYDCQSVLMVAGILQGACNSMAFLHLFQRADAINALNPRWR-YLRIFALFLVIANWAVLGGVVVDRKFKEVNGPDGTRCLFIPGLVVFRVKFLVQLVNHVVQS----AFFVWPLIVHIRLLDKGRRAGLGTSSSVAVYRHMAKRAVIAMTISSIVTIIVTVLV------ILAQRKGYPTTV 239
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA) HSP 1 Score: 121 bits (303), Expect = 9.410e-28 Identity = 76/189 (40.21%), Postives = 97/189 (51.32%), Query Frame = 1
Query: 280 GAFFEIFSEGVVLTVGTITTI----CFAERCWKRSA-PLNVTGLLAGIVAVFYSVYALTYWFNGISGYDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGP-RCAMTFNLPSFRLKWIAQFVNQTFQAWMSGGTFVYPLILHLKIME 828
G FF F E LT I + F ERC R A +N+TG +A ++AV Y L Y++ G C L + G +SNAL FLHLF++ADA N+ N WR +RW GIA T NWATL V T T V G RC TF+ +F KW+ Q +N + M FV+PL H+K M
Sbjct: 4 GQFFAYF-ETTCLTTTFIIALEVGWFFGERCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGAEELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRP-WRWFGIALTALNWATLLAV--CFTRTAVLATSGSQRCKFTFDQSTFEAKWVVQLLNHVVFSMM----FVFPLRQHMKEMH 184
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A835ZCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.410e-22 Identity = 63/196 (32.14%), Postives = 93/196 (47.45%), Query Frame = 1
Query: 292 EIFSEGVVLTVGTITTICFAERCWK-RSAPLNVTGLLAGIVAVFYSVYALTYWFNGISGY-DCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGPRCAMTFNLPSFRLKWIAQFVNQT-------------FQAWMSGGTFVYPLILHLKIMEAG 834
E+ + G++LT+ TT+ F R + R +N++ LA + + Y+ Y L YWF GI + C + V G A N++ FLHLF++ADA N N KWR + R VG+ NWA LG V T EV G D RC R+ N+ + FV+PL +H+++M+ G
Sbjct: 6 EVAALGMLLTISLQTTVFFGHRYFSYRRVWMNLSAFLASALGLIYAAYKLGYWFAGIGAFFSCRNVMMVGGIVQGACNSMAFLHLFLRADAINSLNSKWR-YLRVVGMVLVAANWAALGAVIVDRTYKEVQGPDRTRCLFVPGTVVLRVNHTHHISNRPPGVSLIEVRLFPLLPVGVQSAFFVWPLTVHIRLMDKG 200
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A835Z900_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z900_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.260e-21 Identity = 66/194 (34.02%), Postives = 95/194 (48.97%), Query Frame = 1
Query: 268 SPAFGAFFEIFSEGVVLTVGTITTICFAERCWKRS-APLNVTGLLAGIVAVFYSVYALTYWFNGISGYDCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTG-----TEVDGLDGPRCAMTFNLPSFRLKWIAQFVNQTFQAWMSGGTFVYPLILHLKIMEA 831
S AF FE+F+ V L + TT+ F +R R+ A LN+TGLLA +++FY+++ALT WF GI G CT + VNG +S+SNAL + L VH +L+G T + G + RC TF +F+LKW+ Q N A G FV+PL+ H++ + A
Sbjct: 4 STAFVPLFEVFALTVTLMIALQTTVAFGKRYLSRNRALLNLTGLLASFLSLFYTLWALTIWFCGIGGLSCTVIQVVNGMCLSSSNALAVV----------------------------------LVAVHTLLSGYAAPNTALGGEE--RCVWTFEEATFKLKWLVQLFNHILMA----GLFVWPLLAHVRGVRA 157
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.100e-19 Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 304 EGVVLTVGTITTICF-AERCW---KRSAPLNVTGLLAGIVAVFYSVYALTYWFNGISGY-DCTTLAAVNGTSMSASNALTFLHLFVKADASNRSNPKWRNFYRWVGIAATVFNWATLGVVHAMLTGTEVDGLDGPRCAMTFNLPSFRLKWIAQFV 753
+G+ + + CF AE+ + KR+ + T LLA ++ V Y+ + L Y++ G+ D A G S SNAL FLHLF++AD +N NP W + +R VGIA TV NWA L V A+ T + G RC+ + SF L W++Q V
Sbjct: 33 QGITVFLAAAMAGCFFAEKAFMLGKRNT-ITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHW-HMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLV 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig114.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig114.49.1 >prot_P-littoralis_Contig114.49.1 ID=prot_P-littoralis_Contig114.49.1|Name=mRNA_P-littoralis_Contig114.49.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp MPSPAFGAFFEIFSEGVVLTVGTITTICFAERCWKRSAPLNVTGLLAGIVback to top mRNA from alignment at P-littoralis_Contig114:314934..325866- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig114.49.1 ID=mRNA_P-littoralis_Contig114.49.1|Name=mRNA_P-littoralis_Contig114.49.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10933bp|location=Sequence derived from alignment at P-littoralis_Contig114:314934..325866- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig114:314934..325866- >mRNA_P-littoralis_Contig114.49.1 ID=mRNA_P-littoralis_Contig114.49.1|Name=mRNA_P-littoralis_Contig114.49.1|organism=Pylaiella littoralis U1_48|type=CDS|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig114:314934..325866- (Pylaiella littoralis U1_48)back to top |