prot_P-littoralis_Contig114.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig114.5.1
Unique Nameprot_P-littoralis_Contig114.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length963
Homology
BLAST of mRNA_P-littoralis_Contig114.5.1 vs. uniprot
Match: D7FXJ8_ECTSI (Pinin_SDK_memA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ8_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 8.590e-130
Identity = 403/695 (57.99%), Postives = 438/695 (63.02%), Query Frame = 0
Query:    1 MEFDRNAIGSLEDVRREWDSLEDERSKVEEKLRNFDGAAGRGRGXXXXXXXXXXXXXXXXXXXIXLGDRG---GGGGDWSRDRPRDNNTGGNGREAPQQNSYQASREKYRAMSGKWERGLDPATAALHDDDPAQQQSEGRGRGXXXXXXXXXXXXXXXXXXXSTASYQRSANSRTGGSGRDNGRAVTIRSANGXXXXXGIRGDRDTRRXXXXXXXXXXXXMPXSMNGGMRGNRDIXXXXXXXXXXXXXXFRNGGSGRGGSKDHDYRGXXXXXXXXXXXXXXXXXXXXKRPRVTSVIVIAGDDDTTNGDGGGVGTMENGELDRWNADPTPATATAAEPAXXXXXXXXXXXXXXXXXXXXXXXXVDYEPEAEPEEEVGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXXPTGKIVXXSGGGPRGRAARAGGVAGSGGMRQSLARRLGPPMGKPVMVCAAAKEGADA--FVPLAERPMPEPSKPELHQAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKTLIQRQNHAVEMAATRQXXXXXXXXXXXXXXXXXERDDELHKRDFIDARQKKTLVALHGNAFIANQEQLKGCIFTKALPKLAWTPNEHTDVTQALLADSNKEVDACIVARREADDREFQKLDDSVAQRAAARVSRRIGSSGNGGRQGERQDRDANPYGEGNERCWPTKSG 690
            M+FDRNAIGSLEDV REWDSLE ER +VE+KLR+FD  AG GRG                   +  G RG     GGDW RDRPRD + GG   EAP + S QASR+KYRAMSG WERGLDPATAAL DD P     EGRGRG                   S A YQR A+S     GR   R V            G+RGDRD                   M G   G+RD+   XXXXXXXXXXX                  XXXXXXXXXXXXXXXXXXXX    VTS IV+AGD+DT NGDG    T ENGELDRWN +  PA+       XXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXX          GGPRGRAA  GGVAGSGG R SLA RLGP                    F+PL+ERPMPEPSKPELH AYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDK++IQRQ   VEMAA RQ                 ERD+ELHKRD+I ARQ+KTLVALHGN FIANQEQLKG IFTK LPKLAW+PNEHTDVTQALLADS+KE+D  I  R+EADD+EFQK+DDSVA+RAA R SRR+  +  G + G RQDRDAN +GEGN   W   +G
Sbjct:    1 MDFDRNAIGSLEDVHREWDSLETERVRVEDKLRSFDAPAG-GRGGGFGGRGVR----------VMGGGRGRDRSDGGDWRRDRPRDTSNGGR-EEAPHRPS-QASRDKYRAMSGTWERGLDPATAALDDDAPP----EGRGRGGGGTAGLRGGTKG------SIAHYQRPADSHGDRRGRGRDRGVA------PMHGAGVRGDRD------------------GMRGDRTGDRDVFSRXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXVTSTIVVAGDEDT-NGDG----TTENGELDRWNTELPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GGPRGRAANIGGVAGSGGGRGSLASRLGPXXXXXXXXXXXXXXXXXXXXFMPLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQMAETAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIERRKEADDKEFQKIDDSVAERAATRASRRMAHAPGGRQMGVRQDRDANSHGEGNGHRWQMAAG 633          
BLAST of mRNA_P-littoralis_Contig114.5.1 vs. uniprot
Match: A0A7S2R5E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5E1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.440e-19
Identity = 71/194 (36.60%), Postives = 97/194 (50.00%), Query Frame = 0
Query:  462 AKEGADAFVPLAERPMPEPSKPELHQAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKTLIQRQNHAVEMAATRQXXXXXXXXXXXXXXXXXERDDELHKRDFIDARQKKTLVALHGNAFIANQEQLKGCIFTKALPKLAWTPNEHTDVTQALLADSNKEVDACIVARREADDREFQKLDDSVAQRAAARVSR 655
            A+ G  A  P A+ P  E  KPE  +AY+D   KKRNRRMFG LM HLG A++ L  D+  IQ +    E    +                  E++  L +RD I    +KT  AL    +   Q QL+  I TKA P + W P +H D T ALLA+S   V+  I  RR  D++EF  ++  + +RA  R +R
Sbjct:  164 ARGGYSASRPPADLPKIE-KKPESQEAYEDEGVKKRNRRMFGALMGHLGTAQRLLKRDEKKIQSKAKVHETVELKNKESSQKLRKLEREMSAAEKEKALTRRDEILVEMRKTERALMTADWEKRQRQLEPFIATKAQPAIYWLPKDHNDATTALLAESKAAVERLITDRRAEDEQEFVTIETQIRERAEKRQAR 356          
BLAST of mRNA_P-littoralis_Contig114.5.1 vs. uniprot
Match: A0A835ZEL7_9STRA (Pinin_SDK_memA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.920e-11
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 0
Query:  496 KRNRRMFGGLMAHLGRARQQLDHDKTLIQRQNHAVEMAATRQXXXXXXXXXXXXXXXXXERDDELHKRDFIDAR-QKKTLVALHGNAFIANQEQLKGCIFTKALPKLAWTPNEHTDVTQALLADSNKEVDACIVARREADDREFQKLDDSVAQRAAARVSRRIGSSG 661
            KR++RMFG LM HLG ARQ+LD DK +I  Q       A +Q                  R+ ++ +R     R Q +  VA+    ++  QE L+G + T+ALP L W PNEH D+TQA+       VD  + AR + D+   + +++ +  +    V  R G+ G
Sbjct:  161 KRDKRMFGALMGHLGAARQRLDRDKAVIDTQARLARSVADKQQQQSQQLRQLERELEQQRRNLDMARRAEAAGRVQVEERVAVT-QLWLKAQEPLRGVLVTRALPPLTWLPNEHNDITQAMAQAQRAAVDDAMQARLDEDEDFARSIEEDIEAKFPG-VRARAGTGG 325          
BLAST of mRNA_P-littoralis_Contig114.5.1 vs. uniprot
Match: A0A7S2BBZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBZ9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 9.820e-8
Identity = 39/120 (32.50%), Postives = 57/120 (47.50%), Query Frame = 0
Query:  487 QAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKTLIQRQNHAVEMAATRQXXXXXXXXXXXXXXXXXERDDELHKRDFIDARQKKTLVALHGNAFIANQEQLKGCIFTKALPKLAWTPN 606
            +AY     KKRNRRMFG LM HLG AR  +  D  LI+++    +    +                  E++    KRD I  + ++T +++    +I  Q++LK  I TK  P L W PN
Sbjct:   45 EAYSGDAVKKRNRRMFGALMGHLGNARSAIKRDSKLIEQKAKVEQTVRNKNAESSVRIRKLERQMSISEKEKAFTKRDQILCQMRQTELSMLTEEWIQRQQKLKQFIGTKTEPVLFWMPN 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig114.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXJ8_ECTSI8.590e-13057.99Pinin_SDK_memA domain-containing protein n=2 Tax=E... [more]
A0A7S2R5E1_9STRA8.440e-1936.60Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZEL7_9STRA2.920e-1132.93Pinin_SDK_memA domain-containing protein n=1 Tax=T... [more]
A0A7S2BBZ9_9STRA9.820e-832.50Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableCOILSCoilCoilcoord: 534..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..962
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 693..724
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 809..830
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 929..955
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 911..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..212
IPR006786Pinin/SDK/MemA proteinPFAMPF04696Pinin_SDK_memAcoord: 494..620
e-value: 7.6E-20
score: 71.3
IPR039853PininPANTHERPTHR12707PINNcoord: 12..716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig114contigP-littoralis_Contig114:24376..36344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig114.5.1mRNA_P-littoralis_Contig114.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig114 24100..36555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig114.5.1 ID=prot_P-littoralis_Contig114.5.1|Name=mRNA_P-littoralis_Contig114.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=963bp
MEFDRNAIGSLEDVRREWDSLEDERSKVEEKLRNFDGAAGRGRGGGGFGL
RGGGRGVGGRGRVIGLGDRGGGGGDWSRDRPRDNNTGGNGREAPQQNSYQ
ASREKYRAMSGKWERGLDPATAALHDDDPAQQQSEGRGRGGRGGGMRGDN
TNNNNVDDNSTASYQRSANSRTGGSGRDNGRAVTIRSANGGGGGGGIRGD
RDTRRGDRGGIRGERYAMPGSMNGGMRGNRDIMRANRDIVRGNADLFRNG
GSGRGGSKDHDYRGSGSGGGGGGGSGGGGGEPEAKRPRVTSVIVIAGDDD
TTNGDGGGVGTMENGELDRWNADPTPATATAAEPAAAAAAGAAASEEKNN
DDNNNDDDNVDYEPEAEPEEEVGLGGGDTSAPPPGEEESATGGGPTEEKG
DEEGEGVEERRPTGKIVVVSGGGPRGRAARAGGVAGSGGMRQSLARRLGP
PMGKPVMVCAAAKEGADAFVPLAERPMPEPSKPELHQAYKDGDTKKRNRR
MFGGLMAHLGRARQQLDHDKTLIQRQNHAVEMAATRQQQEKRQQRQNAAS
AARQERDDELHKRDFIDARQKKTLVALHGNAFIANQEQLKGCIFTKALPK
LAWTPNEHTDVTQALLADSNKEVDACIVARREADDREFQKLDDSVAQRAA
ARVSRRIGSSGNGGRQGERQDRDANPYGEGNERCWPTKSGMGEDDFGKGE
ESGRSGTRGKRGHESERAGDGGGDDGDDGVALPANPGDAGGGGGVEYEES
AGSLANPDDAAGGVDHEPMVVEAAAEVAVMAVGEPEGREVKEEKSAEVTG
GVAAEGMDVDEDGGMHNDLAENKEGGKPEESSPGHSPAPAWDKSGDANVE
GGGGSRKRSDVDPGEDDEARVTGDGGGAVVEGDEHFGGVDAGARAVEADA
GNGLVDAAEQGTEKAEAEEDGAEIDKLAKKKSKKKKKERRSSGGSGRKKS
SRRSSSTRKHDG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006786Pinin_SDK_MemA
IPR039853Pinin