mRNA_P-littoralis_Contig1139.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: D8LIK5_ECTSI (RNA pol II accessory factor, Cdc73 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK5_ECTSI) HSP 1 Score: 746 bits (1927), Expect = 1.600e-267 Identity = 400/477 (83.86%), Postives = 413/477 (86.58%), Query Frame = 1
Query: 253 MEALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPTAWKSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIGGISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPKFMDADKAIVAKILANEISIADRNTILRKEGKSFRFALDYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEMMA 1683
MEALSLLRQCTMARKT REEKDYYVFGHRRVPKDTPTAWKSQVQSEYYSLKQLV LLEHADAPMVTYIAACT K VKWVASIEKADVLAYLRGQTDDA QIDKTA SS ERANKRSH E Q+GMT+TEMREAKKAHAQRLENRGGG SRAGLLSGQDPL+SR EG+GIGGISQDKLLELRAKRLSHKRNTIVS GDDAADN VDPKF+ ADK IVAKILANE+SI+DRN++LRKEGKSFRFAL+YYNQVR SGSGRGGT A GR XXX DLAGATPVIIVPTVPTSLVTLYNATDFL+DGNFIPTM+KKSK +RKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEMM
Sbjct: 1 MEALSLLRQCTMARKTVREEKDYYVFGHRRVPKDTPTAWKSQVQSEYYSLKQLVILLEHADAPMVTYIAACTSKGVKWVASIEKADVLAYLRGQTDDAAQIDKTAAPPSS-ERANKRSHNELQKGMTDTEMREAKKAHAQRLENRGGGGSRAGLLSGQDPLLSRGEGTGIGGISQDKLLELRAKRLSHKRNTIVSVGDDAADN-PVDPKFLGADKMIVAKILANEMSISDRNSVLRKEGKSFRFALEYYNQVRRKEKDQARENVDGYGKRKTRADREARQSGSGRGGTISASGGRX-----XXXXXXXXXXDLAGATPVIIVPTVPTSLVTLYNATDFLQDGNFIPTMDKKSKSERKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEMMT 470
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A6H5L1F0_9PHAE (CDC73_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F0_9PHAE) HSP 1 Score: 336 bits (862), Expect = 2.340e-110 Identity = 176/195 (90.26%), Postives = 184/195 (94.36%), Query Frame = 1
Query: 253 MEALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPTAWKSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIGGISQDKLLELRAKRLSHKRNTIVS 837
MEALSLLRQCTMARKT REEKD+YVFGH+RVPKDTPTAWKSQVQSEYYSLKQLV LLEHADAPMVTYIAACT K VKWVASIEKADVLAYLRGQTDDAPQID+TA +SSERANKRSH E Q+GMT+TEMREAKKAHAQRLENRGGG SRAGLLSGQDPL+SR EG+GIGGISQDKLLELRAKRLSHKRNTIVS
Sbjct: 1 MEALSLLRQCTMARKTVREEKDHYVFGHKRVPKDTPTAWKSQVQSEYYSLKQLVILLEHADAPMVTYIAACTSKGVKWVASIEKADVLAYLRGQTDDAPQIDRTAA-PTSSERANKRSHNELQKGMTDTEMREAKKAHAQRLENRGGGGSRAGLLSGQDPLLSRGEGTGIGGISQDKLLELRAKRLSHKRNTIVS 194
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A835YIM7_9STRA (RNA pol II accessory factor, Cdc73 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM7_9STRA) HSP 1 Score: 328 bits (840), Expect = 7.820e-103 Identity = 204/504 (40.48%), Postives = 294/504 (58.33%), Query Frame = 1
Query: 253 MEALSLLRQ-CTMARKTAREEKDY-YVFGHRRVP--KDTPTAWKSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQI------DKTATLASSSERANKRSHGEQQRG-MTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIGGISQDKLLELRAKRLSHKRNT--IVSAGDDAADNNAVDPKFMDADKAIVAKILANEISIADRNTILRKEGKSFRFALDYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGAT--------------PVIIVPTVPTSLVTLYNATDFLRDGNFIPT--MEKKSKCDRKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
M+AL LRQ C R + +D V G R P DT T+W+S+ +E+Y+L L+ LL++AD P+ Y+ T VK+V+++++ ++LAYL+G+ D + I DK+ A S ++ GE G +TE ++R+AK+ HA+RL GG +RA L D + E + G+S DKLLELR KRL+ KR+T + + G+ + AVDP F+DAD+ +VA I A EI + DRN++LR+ GK F+FA DYY +VR RGG R AVV A G+ A + P+I+VP + ++++TL NA +F +G F+P + +K DRK S++++ER G+ +R+IDN TRL P+EW++ VCV+V G AWQFKGW WDQPV LFQ+ LGVH+KFDD RV+ KV+ WNVRVL+INKHKR+LDKGA L WR++D+F+ ++KP M
Sbjct: 1 MDALQALRQACIQGRVPKLKPEDTTVVLGDRGSPWSLDTRTSWRSKA-NEFYTLHALILLLQYADEPIGNYLRTATTWKVKFVSNVDRKELLAYLKGEIDASDAIQSSAVADKSVFAAQDSMPLKRQRAGEGDAGGLTEDQLRDAKQRHAERL----GGPARARALIISDRMAGESEL--LEGMSSDKLLELRTKRLAQKRSTFSLEAGGEPGEEEAAVDPAFLDADRQMVAHIRAKEIRVLDRNSVLRRPGKDFKFAHDYYQEVRRKEKEMAKEKEDGTYGKKRS-----------RGGGVAPDRDRC-----AVVASVSASGEFAQCSCVEDAALADPNAGPPIIVVPNLQSAVITLANAKEFFEEGRFVPANGVIRKPSVDRKSSDVLVERALPGGRHATYRLIDNPTRLRPREWESIVCVIVAGPAWQFKGWVWDQPVVLFQHALGVHLKFDDTRVDGKVASWNVRVLDINKHKRYLDKGASLALWRMIDDFVHVHKPHM 481
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A8J1Y476_OWEFU (Ofus.G131130 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y476_OWEFU) HSP 1 Score: 184 bits (468), Expect = 5.340e-48 Identity = 146/542 (26.94%), Postives = 245/542 (45.20%), Query Frame = 1
Query: 238 QELERMEALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPTAW------KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRG---------MTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIGGISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPK-FMDADKAIVAKILANEISIADRNTILRKEGKSF---------------------------------------------RFALDYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSG-SGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWDQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+E + + LS++RQ + +K E+++ +FG PK T + K + EYY+L ++ LL++ Y+ +V V ++ D+LAYL G+ + IDK+A L S +R + + E ++++AK+ A +L+ G + Q S E +S++K+ ++AKRL+ KR TI GDD ++ + F+D + + I++ E R ++L+ GK+F + + +NQ R G SGR VAP R S A G G TP+II+P TSL+T++NA D L+D ++ T +KK++ ++ +E++I+R + G + FR+IDN +L ++W V V VQG AWQFKGW W QP +F + H+KF ++ +++ V +W+V V+ I++HKRHLD+ L FW +LD +M K +
Sbjct: 2 EEGKMADVLSVIRQYNINKKEITEKEEQVIFGEFAWPKTAKTNYLIWGTGKEGLAKEYYTLDCILFLLKNVHLQHALYVRQAASINVPVVRRPDRKDLLAYLNGEISTSTSIDKSAPLEISLQRPTQLKRAADDTAPDSDAKKPRIEEAQVQQAKERLAAKLD----GPKEGSMFPDQIKASSLSE-----AMSREKIAAIKAKRLAKKRATIK--GDDDITLGVLEQRNFVDTEVDVTRDIISRERQWRTRTSVLQSAGKTFLENITGILQAVRAREEGHKKPHTHPASHPTRNLPAAPVGNQNKTPNESYNRFNQERFKAKEETEGFKIDTMRSYAGMTLKSVTEGASGRKVEPVAP--RPISQARPSSGG---GQKRTSKTPIIIIPAATTSLITMFNAKDLLQDLKYLSTEQKKAQGLKRDNEVLIQRQKNNGTTVPFRIIDNPGKLQTQDWDRVVAVFVQGPAWQFKGWHWGQPQDIFARIKAFHLKFSEIPLDNNVKKWDVTVMAIDRHKRHLDRANLQTFWEVLDRYMAKYKSHL 527
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: UPI001B8898B9 (parafibromin-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8898B9) HSP 1 Score: 183 bits (464), Expect = 1.750e-47 Identity = 146/534 (27.34%), Postives = 240/534 (44.94%), Query Frame = 1
Query: 256 EALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPT---AW---KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGE--------QQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIGGISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPKFMDADKAIVAKILANEISIADRNTILRKEGKSFR---FAL-----------------------------------DYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGT------AVAPAGRAGSSASAVVGXXXAGGDLAGA-TPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWD-QPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+ LS+LRQ + +K E+ D +FG PKD T W K + EYY+L ++ LL++ Y+ V V ++ D+L+YL G+T + IDK+A L S + E ++ + E ++++AKK ++++R S ++ Q S E + +K+ ++AKRL+ KR I S DD F+DA+ + I++ E R TIL+ GK F F++ + Y+Q R G+ T V P R +V G+ TP++I+P TSL+T++NA D L+D F+ T EKKS+ ++ +E++I+R G + +R+IDN +L +W+ V V VQG AWQFKGW W+ PV +F + H+K+ ++ +++ V +W V V+ +++HKRHLD+ L +FW LD ++L KP +
Sbjct: 3 DVLSILRQYNVNKKEIIEKDDQIIFGEFAWPKDVKTNYVVWGTGKDGIVKEYYTLDSILFLLKNVHLQHPMYVREAVAASVHVVRRPDRKDLLSYLNGETTTSSSIDKSAPLEISQRPIQVKRSAEDGGPDTEKKKPRLEEEQVQQAKKDWISKIDSRRDNS----VMPSQLGTSSLHEAMPL-----EKIAAIKAKRLAIKRTKITSLDDDIQPGQLEQRSFVDAEVDVTRDIVSRERLWRTRTTILQSVGKQFAKNIFSILQSIKAREEGTSRHHNAPSNTPSVIAPKPQPTVGYNRYDQERFRRNEETEGFKIDTMGTYHGMTLKSVTEGASARKTHTPQPQPVQPISRP------IVQARPPPNQKKGSRTPIVIIPAAATSLITMFNAKDVLQDLKFVSTEEKKSQGVKRDNEVLIQRRKDGGLTVPYRIIDNPVKLQQDDWERVVAVFVQGPAWQFKGWPWNGNPVEIFSKIKAFHLKWSELPLDNNVKKWAVHVIALDRHKRHLDRANLQQFWEHLDRYLLKYKPHL 521
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A6P7SIE3_OCTVU (parafibromin n=3 Tax=Coleoidea TaxID=6606 RepID=A0A6P7SIE3_OCTVU) HSP 1 Score: 178 bits (451), Expect = 1.160e-45 Identity = 146/534 (27.34%), Postives = 243/534 (45.51%), Query Frame = 1
Query: 256 EALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPT---AW---KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSER------ANKRSHGEQQRG---MTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIG-GISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPKFMDADKAIVAKILANEISIADRNTILRKEGKSFRF------------------------------------ALDY--YNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGT-----AVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWD-QPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+ LS+LRQ + +K ++ D +FG PK T T W K + EYY+L ++ LL++ Y+ DV V ++ D+L++L G+ + IDK+A L S +R + G+Q++ + E ++++AKK +++ A + P S++ S + + +K+ ++AKRL+ KR T++ DD A F+DA+ + I++ E R TIL+ GK F A+ Y Y+Q R G+ T P R S A TPVII+P TSL+T++N+ D L+D F+ T EK+++ ++ +E++I+R G + +R+IDN T+L +W V V VQG AWQFKGW WD PV +F + H+K+ D+ +++ + +W V V+ +++HKRHLD+ L +FW +LD +M+ NK +
Sbjct: 3 DVLSILRQYNINKKEIIDKGDQVIFGEFAWPKSTKTNYIVWGTGKDGICKEYYTLDCILFLLKNVHLAHPIYVGEAAAADVTVVRRPDRKDLLSFLNGEISTSSSIDKSAPLEISIQRPVQVKRTTDDNQGDQEKKKPRLEEEQVQQAKKNWMNKID--------APRETSMIP--SKIASSSLPEALPMEKIAAIKAKRLAKKR-TMIKGDDDIAPGADDQRTFVDAEVDVTRVIVSRERLWRTRTTILQSSGKEFAKNIFSILQSIKAREEGSQRQMSHPSQTTPISQSRPPPAVGYNRYDQERFRGKEETEGFKIDTMGTYHGMTLKSVTEGALARKTHTPLPTAIPQPRPISQARPPPNLKKGS-----RTPVIIIPAAATSLITMFNSKDMLQDLRFLSTEEKRAQGMKRENEVLIQRRKEGGLTVPYRIIDNPTKLQADDWDRVVAVFVQGPAWQFKGWPWDGNPVEIFSRIRAYHVKWADLPLDNNIKKWAVNVINLDRHKRHLDRAMLQQFWEVLDRYMMKNKNHL 520
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: UPI0006C960C6 (parafibromin n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C960C6) HSP 1 Score: 178 bits (451), Expect = 1.330e-45 Identity = 143/538 (26.58%), Postives = 244/538 (45.35%), Query Frame = 1
Query: 256 EALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPTAW------KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQD-PLMSRVEGSGIGGISQ----DKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPKFMDADKAIVAKILANEISIADRNTILRKEGKSFRFAL-----------------------------------------DYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSG-----------SGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEWD-QPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+ LSLLR +++K E +FG PK+ T + K EYY+L+ L+ LL+H Y+ +++ V ++ D+LAYL G++ + IDK+A L ++ KR+ + G+ T+ ++ H Q+++ + L + D P + V I +S+ +K+ ++AKRL+ KR TI D ++ MD D+ I+A E R TIL+ GK+F + + Y+Q R + S G + P+ S++++ TP+II+P+ TSL+T+ NA D L+D F+ EK+ + R+ +EI+++R G + +R++DN +L P +W+ V V V G AWQFKGW +D PV +F + H+K+D++RV+ V++W V ++E++K KRHLD+ A+++FW +LD M+ NKP +
Sbjct: 3 DPLSLLRLYNVSKKEIIERDGQIIFGEFSWPKNVKTNYLTYGSGKDGAAKEYYTLECLLFLLKHVQLTHPVYVRQAATENIPVVRRPDRKDLLAYLYGESSTSTAIDKSAPLEIPTQV--KRTAEDGLEGLPATKKPRFEETHVQKVKEQ--------LAARLDAPKEASVTVDNIKSLSEAMSVEKIAAIKAKRLAKKRTTIKENDDIGMGSDLRVILDMDVDET--KDIVAKERQWRTRTTILQSSGKTFAKDIMAILQSIKVREEGRHKAPMAPAPMITPRSTPMRPLPQPAVYNRYDQERFIRQKEETEGFKIDTMGTYHGMTLKSVTEGTNPAIRKPQPSSHGNPSSTPSNEHMSTSASKSNPQILQNKRPSRTPIIIIPSANTSLITMINAKDILQDLKFVSNEEKRKQGARRENEILLQRRKDGGLTVPYRIVDNPLKLTPSDWERVVAVFVMGPAWQFKGWPFDGNPVEIFSKISAFHIKYDEMRVDTNVARWAVTIIELSKTKRHLDRAAIMQFWEVLDAHMIKNKPHL 528
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A1B0GUB2_HUMAN (Parafibromin n=43 Tax=Amniota TaxID=32524 RepID=A0A1B0GUB2_HUMAN) HSP 1 Score: 171 bits (434), Expect = 7.290e-44 Identity = 139/505 (27.52%), Postives = 226/505 (44.75%), Query Frame = 1
Query: 256 EALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPT---AW---KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIG------------GISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPK-FMDADKAIVAKILANEISIADRNTILRKEGKSFRFALDYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKK--------MKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEW----DQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+ LS+LRQ + +K + D +FG PK+ T W K EYY+L ++ LL + Y+ +++ V ++ D+L YL G+ + ID++A L +R+ Q + + + EAKK + E + ++ L +R+EG G +S +K+ ++AK ++ KR+TI + DD D A+ + F+DA+ + I++ E R TIL+ GK A P + GS TP+II+P TSL+T+ NA D L+D F+P+ EKK + ++ +E +I+R Q + + +RV+D +L P++W V V VQG AWQFKGW W PV +F + H+K+D+VR++ V +W+V VLE++ HKRHLD+ L FW LD +M+ +K +
Sbjct: 3 DVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRST------QVKRAADEVLAEAKKPRIEDEEC---------VRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDD--DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKEGASARKTQTPAAQPVPRPVSQARPP-------------------------PNQKKGSR-----------------TPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHL 448
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A2R8MVT7_CALJA (Cell division cycle 73 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2R8MVT7_CALJA) HSP 1 Score: 171 bits (434), Expect = 7.290e-44 Identity = 139/505 (27.52%), Postives = 225/505 (44.55%), Query Frame = 1
Query: 256 EALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPT---AW---KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIG------------GISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPK-FMDADKAIVAKILANEISIADRNTILRKEGKSFRFALDYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQ--------GKKMKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEW----DQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+ LS+LRQ + +K + D +FG PK+ T W K EYY+L ++ LL + Y+ +++ V ++ D+L YL G+ + ID++A L +R+ Q + + + EAKK + E + ++ L +R+EG G +S +K+ ++AK ++ KR+TI + DD D A+ + F+DA+ + I++ E R TIL+ GK A P + GS TP+II+P TSL+T+ NA D L+D F+P+ EKK + ++ +E +I+R Q + +RV+D +L P++W V V VQG AWQFKGW W PV +F + H+K+D+VR++ V +W+V VLE++ HKRHLD+ L FW LD +M+ +K +
Sbjct: 3 DVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRST------QVKRAADEVLAEAKKPRIEDEEC---------VRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDD--DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKEGASARKTQTPAAQPVPRPVSQARPP-------------------------PNQKKGSR-----------------TPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQIQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHL 448
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Match: A0A671FWJ1_RHIFE (Cell division cycle 73 n=5 Tax=Theria TaxID=32525 RepID=A0A671FWJ1_RHIFE) HSP 1 Score: 171 bits (433), Expect = 1.010e-43 Identity = 139/505 (27.52%), Postives = 226/505 (44.75%), Query Frame = 1
Query: 256 EALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPT---AW---KSQVQSEYYSLKQLVTLLEHADAPMVTYIAACTQKDVKWVASIEKADVLAYLRGQTDDAPQIDKTATLASSSERANKRSHGEQQRGMTETEMREAKKAHAQRLENRGGGSSRAGLLSGQDPLMSRVEGSGIG------------GISQDKLLELRAKRLSHKRNTIVSAGDDAADNNAVDPK-FMDADKAIVAKILANEISIADRNTILRKEGKSFRFALDYYNQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGRGGTAVAPAGRAGSSASAVVGXXXAGGDLAGATPVIIVPTVPTSLVTLYNATDFLRDGNFIPTMEKKSKCDRKPSEIMIERVNSQGKK--------MKFRVIDNATRLHPKEWKACVCVLVQGAAWQFKGWEW----DQPVTLFQNVLGVHMKFDDVRVNDKVSQWNVRVLEINKHKRHLDKGALLEFWRLLDEFMLLNKPEM 1677
+ LS+LRQ + +K + D +FG PK+ T W K EYY+L ++ LL + Y+ +++ V ++ D+L YL G+ + ID++A L +R+ Q + + + EAKK + E + ++ L +R+EG G +S +K+ ++AK ++ KR+TI + DD D A+ + F+DA+ + I++ E R TIL+ GK A P + GS TP+II+P TSL+T+ NA D L+D F+P+ EKK + ++ +E +I+R Q + + +RV+D +L P++W V V VQG AWQFKGW W PV +F + H+K+D+VR++ V +W+V VLE++ HKRHLD+ L FW LD +M+ +K +
Sbjct: 3 DVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSGSIDRSAPLEIGLQRST------QVKRAADEVLAEAKKPRIEDEEC---------VRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDD--DITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKEGASARKTQTPAAQPVPRPVSQARPP-------------------------PNQKKGSR-----------------TPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHL 448 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1139.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1139.9.1 >prot_P-littoralis_Contig1139.9.1 ID=prot_P-littoralis_Contig1139.9.1|Name=mRNA_P-littoralis_Contig1139.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=478bp MEALSLLRQCTMARKTAREEKDYYVFGHRRVPKDTPTAWKSQVQSEYYSLback to top mRNA from alignment at P-littoralis_Contig1139:28970..41457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1139.9.1 ID=mRNA_P-littoralis_Contig1139.9.1|Name=mRNA_P-littoralis_Contig1139.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12488bp|location=Sequence derived from alignment at P-littoralis_Contig1139:28970..41457+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1139:28970..41457+ >mRNA_P-littoralis_Contig1139.9.1 ID=mRNA_P-littoralis_Contig1139.9.1|Name=mRNA_P-littoralis_Contig1139.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1434bp|location=Sequence derived from alignment at P-littoralis_Contig1139:28970..41457+ (Pylaiella littoralis U1_48)back to top |