prot_P-littoralis_Contig1139.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1139.3.1
Unique Nameprot_P-littoralis_Contig1139.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length224
Homology
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BLAST of mRNA_P-littoralis_Contig1139.3.1 vs. uniprot
Match: D7FJZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.060e-17
Identity = 79/158 (50.00%), Postives = 89/158 (56.33%), Query Frame = 0 
Query:   69 RFVRDNQPPDVSPNSGYDGENGTPAFARSCGKAASFRELLCRIPEETLFQLQQIYEALEEPVGGAGNGHGGIRRKSTSSLPRST-LPTAPFGDHMEDEQSGPDGGSGSVVHTPHRRSK-KRARGEEEPATASKAERIEDSSPMQR-KKKKARRKSNAT 223
            RFV +NQ PD     G DG+ G      +   AAS  ELLCRIPEETLFQLQQIYEALE        G  G+  K  SS P  T L  A  GD  E E     GG+ + V TP + +K KR RG EEPATASKA          + KKKK+RRKSNAT
Sbjct:   26 RFVGENQRPDAP--EGGDGDVGDDDVQTATKPAAS-GELLCRIPEETLFQLQQIYEALE--------GASGV--KPASSAPSLTDLIAASAGDGGEAEPM--SGGTEASVVTPEKTTKQKRVRGGEEPATASKASGGSSIGTSPKIKKKKSRRKSNAT 168
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BLAST of mRNA_P-littoralis_Contig1139.3.1 vs. uniprot
Match: A0A6H5JU48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU48_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.640e-16
Identity = 73/178 (41.01%), Postives = 83/178 (46.63%), Query Frame = 0 
Query:    4 MDCVPELAVTKRKMISSSKMAKRLRRLSSHRMWNVSRVREHSQSHPPAAVQPAVKARKAHPRTAPRFVRDNQPPDVSPNSGYDGENGTPAFARSCGKAASFRELLCRIPEETLFQLQQIYEALEEPVGGAGNGHGGIRRKSTSSLPRST-LPTAPFGDHMEDEQSGPDGGSGSVVHTP 180
            MDC+PEL V KRK ISSSKMAKRLR                                        RFV +NQ PD     G DG+ G      +  K A+  ELLCRIPEETLFQLQQIYEALE        G  G+  K  S  P  T +  A  GD+ E E   P GG+ + V TP
Sbjct:    1 MDCLPELVVAKRKTISSSKMAKRLR----------------------------------------RFVGENQRPDAP--EGGDGDVGDDDVTNAT-KPAATGELLCRIPEETLFQLQQIYEALE--------GASGV--KPASRAPSLTDIIAASAGDNGETE---PSGGNEASVVTP 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1139.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJZ7_ECTSI1.060e-1750.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU48_9PHAE8.640e-1641.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1139contigP-littoralis_Contig1139:22017..26105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1139.3.1mRNA_P-littoralis_Contig1139.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1139 21956..26933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1139.3.1 ID=prot_P-littoralis_Contig1139.3.1|Name=mRNA_P-littoralis_Contig1139.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp
MVAMDCVPELAVTKRKMISSSKMAKRLRRLSSHRMWNVSRVREHSQSHPP
AAVQPAVKARKAHPRTAPRFVRDNQPPDVSPNSGYDGENGTPAFARSCGK
AASFRELLCRIPEETLFQLQQIYEALEEPVGGAGNGHGGIRRKSTSSLPR
STLPTAPFGDHMEDEQSGPDGGSGSVVHTPHRRSKKRARGEEEPATASKA
ERIEDSSPMQRKKKKARRKSNAT*
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