mRNA_P-littoralis_Contig1138.19.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1138.19.1
Unique NamemRNA_P-littoralis_Contig1138.19.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 1.610e-162
Identity = 252/321 (78.50%), Postives = 279/321 (86.92%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIG 963
            LTLEY  DL+G SV+  DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGS TTCKNK M    KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTRWTSQ +MM RLLILKK I+EYFRRLAQQN Q+KQLKRKLTAHEWTVTNEVCSLL+TVSE TIRMQGA DTH+SQATFI++EV+DML  D HPIRVE+A+VTPPP A G+IPTE E Q +++SL  +ST +TQVTDLT EAQDVVQV+LEV++EKGVGKALQ VER+SVLLDPRRK  D   + NGS  L+ QAEADLKAFIG
Sbjct:  152 LTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQ-NESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIG 467          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 1.120e-149
Identity = 227/251 (90.44%), Postives = 232/251 (92.43%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQ 753
            LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNA T LGVPVVECNCHRVNSAVLWALGIAG A TCKNKLMGDLMKKLAA VGVFSHSAVNNDMLKEIQRLEADLHRVYE        WTSQFRMM RLLIL KAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVM+MLK+DSHPIRVENA+VTPPPQAPGLI  EEEEQQHQ SL ++STEDTQ
Sbjct:  149 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRVENAMVTPPPQAPGLILAEEEEQQHQASLVDISTEDTQ 391          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 8.740e-146
Identity = 234/320 (73.12%), Postives = 261/320 (81.56%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFI 960
            LT EYF   +G SV+P DVFL FTVDQG N+VNACT LGV VV+CNCHR+NSAV+WALGIAGSATTC+N  MG LMKKLAALVGVFS SAVNN MLKE+QRLE DLHR+YEL+RRNDT   SQF+MM RLL LKK I+EYFRRL Q  P +KQLKRKL++HEW VTNEVCSLL  VSE TIR+QGA DTHISQA F++HEVM+MLKD++HPIR  NA+VTPPP A  +IPTEEEE Q Q     VSTED  V DLT EAQ V +V+LEV+EEKGVGKALQRVER+S LLDPRRK  DA QVGNG E LR  AEADLK FI
Sbjct:    7 LTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQ-IPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQ--KGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFI 319          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 8.100e-140
Identity = 228/321 (71.03%), Postives = 253/321 (78.82%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIG 963
            LTLEYF DL+G SV+  DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGSATTCKNK M    KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTRWTSQ +MM RLLILKK I+EYFRRLAQQN Q+KQLKRKLTAHEWTVTNEVCSLL+TVSE TIRMQGA +TH+SQATFI++E                                  E Q+++SL  +STE+TQVT LT EAQDVVQV+ E+++EKGVGKALQRVER+SVLLDPRRK  D   + NGS  L+ QAEADLKAF G
Sbjct:  152 LTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEG---------------------------------EGQNESSLDGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTG 435          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 4.630e-119
Identity = 203/320 (63.44%), Postives = 236/320 (73.75%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFI 960
            LT EYF D +G  V+P DVFL FTVDQG N+VNAC  LGVPVV+CNCHRVN+AVLWALGIAG+    +NK+MGDLMKKLAALVGVFSHSAVNND LKE+QRLE DLH VY+LIRRNDTRWTSQF+MM RLL LKK I EYFR    + P +    RKLT  EWT+TNEVCSLL  VSE TIRMQGA DTHISQA FI+HEVM+ML++DSHPIR +NA             TE EE Q              V +L+  AQ V++V+L+V+EEK VGKA+Q+VER+S L+DPRRK  D  ++ NGS  LR +AE DLKA I
Sbjct:  341 LTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFR----EQPHNS---RKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNA-------------TEPEEMQ--------------VLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVI 624          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 1.040e-115
Identity = 195/320 (60.94%), Postives = 230/320 (71.88%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFI 960
            LTLEYF   +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG      N  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+R NDTRWTSQF+MM R+L LKK I+EYF++  Q         RKLT +EWT+TNEVCSLL  VSE TIRMQG+ DTH+ QA FI+HE+++ML +D+HPIR  NA V P P  P  IPT+                DTQV DLT EAQ V++V+ E + EKGVG A   VER+S L+DPR +  D+DQ+ NGS  LR +AE DLKA I
Sbjct:  148 LTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNE-------RKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLP--PEGIPTD----------------DTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVI 440          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.140e-115
Identity = 197/320 (61.56%), Postives = 232/320 (72.50%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFI 960
            LTLEYF   +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG      N  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+RRNDTRWTSQF+MM R+L LKK I+EYF++  Q         RKLT +EWT+TNEVCSLL  VSE TIRMQG+ DTH+ QA FI+HE+++ML +D+HPIR  NA V P P  P  IPT+                DTQV DLT EAQ V++V+ E + EKG+G A   VER+S L+DPRRK  D+DQ+ NGS  LR +AE DLKA I
Sbjct:  343 LTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNE-------RKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLP--PEGIPTD----------------DTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVI 635          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 1.590e-104
Identity = 180/312 (57.69%), Postives = 218/312 (69.87%), Query Frame = 1
Query:   28 IGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRW-TSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFI 960
            +G SV P + FL FTVDQGKNI+NACT L V VVECNCHRVN+AV+WALGIA      KN  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+RRNDTRW TSQ +MM R L LKK I+E+F++  Q +       RKLT +EWT+ NEVCSLL  VSE TIR+QG+ DTHI QA FI+HEV++ML +D+HPIR  NA V P P+                    + T+DT VTDLT EA  V++V+L+V+ +KGVG A    ER+S L+DPRRK   +DQ+ NGS  L  +AE DLKA I
Sbjct:    1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQND-------RKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEG------------------IPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVI 285          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 3.070e-89
Identity = 163/317 (51.42%), Postives = 204/317 (64.35%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLK 951
            LT E+F D++G +VQP DVFL FTVDQG N+VNAC  L V V++CN HR+NS  +WALGI GS  T +N  M  LMK+LAA+VGVFSHSAVNND LK+IQRL+ +   +YELIRRNDTRW SQ  MM RLL LKKAI EYFR     N       RKL++ EWTVTNEVCSLLD V+E T+++QGA DTHISQ  F + E+ ++   D + IRV +             P  ++          V  E  QV DL  E   V +V+L  +E+K +G A   +ER+  LLDPRRK C  + + NGS  L+A A AD+K
Sbjct:    3 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNN-------RKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQ------------PYNDDS---------VLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVK 291          
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 5.120e-86
Identity = 163/317 (51.42%), Postives = 204/317 (64.35%), Query Frame = 1
Query:    1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLK 951
            LT E+F D++G +VQP DVFL FTVDQG N+VNAC  L V V++CN HR+NS  +WALGI GS  T +N  M  LMK+LAA+VGVFSHSAVNND LK+IQRL+ +   +YELIRRNDTRW SQ  MM RLL LKKAI EYFR     N       RKL++ EWTVTNEVCSLLD V+E T+++QGA DTHISQ  F + E+ ++   D + IRV +             P  ++          V  E  QV DL  E   V +V+L  +E+K +G A   +ER+  LLDPRRK C  + + NGS  L+A A AD+K
Sbjct:  331 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNN-------RKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQ------------PYNDDS---------VLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVK 619          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1138.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JZU3_9PHAE1.610e-16278.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE1.120e-14990.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ6_9PHAE8.740e-14673.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE8.100e-14071.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRT6_9PHAE4.630e-11963.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE1.040e-11560.94Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.140e-11561.56Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KAS2_9PHAE1.590e-10457.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAN7_9PHAE3.070e-8951.42Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE5.120e-8651.42Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1138contigP-littoralis_Contig1138:48730..50123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog38654.XP_006037640.1
Preferred nameZBED6
PFAMsDimer_Tnp_hAT,zf-BED
Model size967
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
GOsGO:0000976,GO:0000977,GO:0000981,GO:0001012,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0070013,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
Exons2
Evalue4.49e-06
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota,39UGW@33154|Opisthokonta,3BCGP@33208|Metazoa,3CWQK@33213|Bilateria,484D5@7711|Chordata,4925D@7742|Vertebrata
DescriptionBED zinc finger
Cds size966
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789462.0819921-CDS-P-littoralis_Contig1138:48729..490851680789462.0819921-CDS-P-littoralis_Contig1138:48729..49085Pylaiella littoralis U1_48CDSP-littoralis_Contig1138 48730..49085 +
1680789462.0970128-CDS-P-littoralis_Contig1138:49513..501231680789462.0970128-CDS-P-littoralis_Contig1138:49513..50123Pylaiella littoralis U1_48CDSP-littoralis_Contig1138 49514..50123 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1138.19.1prot_P-littoralis_Contig1138.19.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1138 48730..50123 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1138.19.1

>prot_P-littoralis_Contig1138.19.1 ID=prot_P-littoralis_Contig1138.19.1|Name=mRNA_P-littoralis_Contig1138.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=322bp
LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRV
NSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQ
RLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQ
HKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHE
VMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDT
QVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQ
VGNGSEALRAQAEADLKAFIGH
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mRNA from alignment at P-littoralis_Contig1138:48730..50123+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1138.19.1 ID=mRNA_P-littoralis_Contig1138.19.1|Name=mRNA_P-littoralis_Contig1138.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1394bp|location=Sequence derived from alignment at P-littoralis_Contig1138:48730..50123+ (Pylaiella littoralis U1_48)
CTCACGCTGGAGTACTTCAAGGACTTGATCGGGCCGTCGGTCCAGCCCCA CGACGTCTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACATCGTGAACG CGTGTACGGGGTTGGGAGTTCCAGTCGTCGAGTGCAACTGTCACCGCGTC AATTCCGCCGTCCTGTGGGCCCTGGGTATTGCGGGTAGTGCGACGACTTG CAAGAACAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAGCGTTGGTCG GCGTCTTCAGCCACTCCGCTGTCAACAACGACATGCTGAAGGAAATCCAG CGGCTGGAGGCGGATCTTCATCGCGTCTACGAGCTCATCCGGCGAAACGA CACCAGGTGTGTTGATGGGGAGGATTTCTTATTTCTTAGGTTTGTTTTTC GTTGTTCAGCACTGAATCCTTTTTTTTTTATATTGTCTGCCCAAAACCAA AAAATTAAAAACCCCCAACCAACAATAATTAAAATAACACTATTGTCTGC CCAAAACCAAAAAATTAAAAACCCCCAACCAACAATAATTAAAATAACAC TGGCGAGTTTTTTTTTCTCCGGTCTTCAGGAAATCCTTTTGTACTGGTAC TGTTTTTTTTTTTTTTACGGCCAGGTTTTCTGGCAACGTTGAATGAGTGC GTGCAATCAATTCTCAATTTCGTTGTTGAGTACAACTTGAACGTTTTTGT CTCAGGACAACCAAAATGCAAACGAAAAACACCAACACCAACGCGGACTC CTTCCCCCCCACCCCACTCCCCCCCTCCCAACAGGTGGACTAGCCAGTTC AGGATGATGGCTCGCCTTCTGATCTTGAAGAAGGCGATCAACGAGTACTT CCGCCGACTTGCCCAGCAGAACCCCCAGCACAAGCAGCTGAAACGCAAGT TGACTGCCCACGAGTGGACCGTCACCAACGAGGTGTGCAGCCTCCTGGAC ACCGTCTCCGAGGCCACGATCCGCATGCAAGGCGCCGCCGACACCCACAT CAGCCAGGCGACGTTCATCGTTCACGAGGTGATGGACATGTTGAAGGACG ACTCTCACCCAATCCGTGTGGAGAACGCCGTGGTCACGCCGCCCCCACAG GCACCGGGCCTCATCCCCACCGAGGAGGAGGAGCAGCAGCACCAGACCTC TCTGGCCGAGGTCTCCACGGAGGACACCCAGGTGACTGACCTCACCCAAG AAGCGCAGGACGTGGTCCAAGTCATGCTGGAGGTGTTGGAAGAGAAGGGA GTGGGGAAGGCGCTGCAGAGGGTGGAGCGAATGTCCGTGCTGCTGGACCC GAGGCGGAAAGGTTGCGACGCCGACCAAGTCGGGAACGGCTCTGAAGCCC TGAGGGCACAAGCCGAAGCGGACTTGAAGGCATTCATCGGCCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1138:48730..50123+

>mRNA_P-littoralis_Contig1138.19.1 ID=mRNA_P-littoralis_Contig1138.19.1|Name=mRNA_P-littoralis_Contig1138.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=966bp|location=Sequence derived from alignment at P-littoralis_Contig1138:48730..50123+ (Pylaiella littoralis U1_48)
CTCACGCTGGAGTACTTCAAGGACTTGATCGGGCCGTCGGTCCAGCCCCA
CGACGTCTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACATCGTGAACG
CGTGTACGGGGTTGGGAGTTCCAGTCGTCGAGTGCAACTGTCACCGCGTC
AATTCCGCCGTCCTGTGGGCCCTGGGTATTGCGGGTAGTGCGACGACTTG
CAAGAACAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAGCGTTGGTCG
GCGTCTTCAGCCACTCCGCTGTCAACAACGACATGCTGAAGGAAATCCAG
CGGCTGGAGGCGGATCTTCATCGCGTCTACGAGCTCATCCGGCGAAACGA
CACCAGGTGGACTAGCCAGTTCAGGATGATGGCTCGCCTTCTGATCTTGA
AGAAGGCGATCAACGAGTACTTCCGCCGACTTGCCCAGCAGAACCCCCAG
CACAAGCAGCTGAAACGCAAGTTGACTGCCCACGAGTGGACCGTCACCAA
CGAGGTGTGCAGCCTCCTGGACACCGTCTCCGAGGCCACGATCCGCATGC
AAGGCGCCGCCGACACCCACATCAGCCAGGCGACGTTCATCGTTCACGAG
GTGATGGACATGTTGAAGGACGACTCTCACCCAATCCGTGTGGAGAACGC
CGTGGTCACGCCGCCCCCACAGGCACCGGGCCTCATCCCCACCGAGGAGG
AGGAGCAGCAGCACCAGACCTCTCTGGCCGAGGTCTCCACGGAGGACACC
CAGGTGACTGACCTCACCCAAGAAGCGCAGGACGTGGTCCAAGTCATGCT
GGAGGTGTTGGAAGAGAAGGGAGTGGGGAAGGCGCTGCAGAGGGTGGAGC
GAATGTCCGTGCTGCTGGACCCGAGGCGGAAAGGTTGCGACGCCGACCAA
GTCGGGAACGGCTCTGAAGCCCTGAGGGCACAAGCCGAAGCGGACTTGAA
GGCATTCATCGGCCAC
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