prot_P-littoralis_Contig1138.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1138.8.1
Unique Nameprot_P-littoralis_Contig1138.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length205
Homology
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 2.120e-126
Identity = 185/198 (93.43%), Postives = 192/198 (96.97%), Query Frame = 0
Query:    7 SAFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            SAF GAA+ TPAKSSSAMKMSFESEIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRIAMLAIAGHLT QN RLPGMLSNSA LSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILA+MVHEEL+N+PYIINDL+GASY+FN
Sbjct:   21 SAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 4.550e-124
Identity = 182/200 (91.00%), Postives = 190/200 (95.00%), Query Frame = 0
Query:    5 DCSAFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            D SAF GAA+ T AKSSSAMKMSFESEIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRIAMLAIAGHLT QN RLPGMLSNSA LSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GA Y+FN
Sbjct:   22 DVSAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 357 bits (915), Expect = 1.610e-123
Identity = 181/198 (91.41%), Postives = 190/198 (95.96%), Query Frame = 0
Query:    7 SAFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            SAF GAALTT AK+ SAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVE+KHGRIAMLAIAGHLT QNTRLPGMLSNSA LSFADMPNGVAALSKIPPAGLAQIFAF+GFLELAVMKNVEGSFPGDFT GGNPF +SWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDLVGASY+FN
Sbjct:   20 SAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 355 bits (911), Expect = 5.300e-123
Identity = 181/198 (91.41%), Postives = 187/198 (94.44%), Query Frame = 0
Query:    7 SAFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            SAF GAAL+TPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVE+KHGRIAMLAIAGHLT QNTRLPGMLSNSA LSFADMPNGVAALSKIPP GLAQIF F+GFLELAVMKNVEGSFPGDF  GGNPFASSWD+MS ETQ SKRAIELNNGRAAQMGIL MMVHEELSNQPYI NDL+GASY+FN
Sbjct:   14 SAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 9.190e-120
Identity = 178/197 (90.36%), Postives = 187/197 (94.92%), Query Frame = 0
Query:    8 AFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            AF GAA+ TPAKSSSAMKMSFESEIGAQ PLGFWDPLGLL DADQERFERLRYVE+KHGRIAMLAIAGHLT QNTRLPGMLSNSA LSFADMPNGVAALSKIPPAGLAQIFAF+GFLELAVMKNVEGSFPGDFT GGNPF SSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GA Y+FN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 344 bits (883), Expect = 1.170e-118
Identity = 176/198 (88.89%), Postives = 185/198 (93.43%), Query Frame = 0
Query:    7 SAFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            SAF GAALTT AKSSSAMKMSFESEIGAQAPLGFWDPLGLL DADQ+ FERLRYVE+K GRIAMLAIAGHLT QN RLPGMLSNSA LSFADMPNGVAALSKIPP GLAQIF F+GFLELAVMKNVEGSFPGDFT GGNPFASSWDAMS ETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GASY+FN
Sbjct:   19 SAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 335 bits (860), Expect = 1.130e-115
Identity = 167/182 (91.76%), Postives = 175/182 (96.15%), Query Frame = 0
Query:   23 AMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            AMKMSFE EIGAQAPLGFWDPLGLLADADQERFERLRYVE+KHGRIAMLAIAGHLT QN RLPGMLSNSA LSFADMPNGVAALSKIPP GLAQIF F+GFLELAVMKNVEGSFPGDFT GGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GASY+FN
Sbjct:    1 AMKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.810e-114
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0
Query:   24 MKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            MKMSFESEIGAQ PLGFWDPLGLL DADQERFERLRYVE+KHGRIAMLAIAGHLT QNTRLPGMLSNSA LSFADMPNGVAALSKIPPAGLAQIFAF+GFLELAVMKNVEGSFPGDFT GGNPF SSWDAMSEETQ SKRAIELNNGRAAQMGILA+MVHEEL+N+PY+INDL+GA Y+FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 303 bits (775), Expect = 2.850e-102
Identity = 155/196 (79.08%), Postives = 166/196 (84.69%), Query Frame = 0
Query:    9 FKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            F GAAL T AKSSSAMKMSFESEIGAQ P+GFWDPLGL+ADADQERF+RLRYVEIKHGRIAMLA+ GH+T QNTRLPGMLS    L+FAD PNGVAA SKIPP G  QI   +G  EL V+K VEGSFPGD T GGN F S+WD MSEETQ SKRAIELNNGRAAQMGILAMMVHE+LSNQPYIINDL GA+Y FN
Sbjct:   17 FNGAALATSAKSSSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212          
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.340e-94
Identity = 147/206 (71.36%), Postives = 162/206 (78.64%), Query Frame = 0
Query:   24 MKMSFESEIGAQAPLGFWDPLGLLADA-------------------------DQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGASYSFN 204
            MKMSFESE+GAQ PLGF+DPLGLL D                          DQERF+RLRYVE+KHGRI+MLA+AGHL AQN R PG LS  A L+FADMPNGVAA+SKIPP GLAQI AF+GFLEL VMKNVEGSFPGD T GGNPFA+ WDAMSEET+ SKRAIELNNGRAAQMGILAMM+HEE+SNQPYIINDL+ A Y+FN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1138.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCX6_9PHAE2.120e-12693.43LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A6H5JHT6_9PHAE4.550e-12491.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPB_MACPY1.610e-12391.41Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
FCPF_MACPY5.300e-12391.41Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
D8LNK6_ECTSI9.190e-12090.36Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
FCPC_MACPY1.170e-11888.89Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPD_MACPY1.130e-11591.76Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
A0A6H5JDS8_9PHAE1.810e-11491.16LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPE_MACPY2.850e-10279.08Fucoxanthin-chlorophyll a-c binding protein E, chl... [more]
A0A6H5KBS3_9PHAE1.340e-9471.36LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 32..184
e-value: 1.2E-32
score: 113.6
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 28..199
e-value: 5.6E-32
score: 113.0
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 12..189
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 19..194
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 12..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1138contigP-littoralis_Contig1138:19214..19828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1138.8.1mRNA_P-littoralis_Contig1138.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1138 18979..20980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1138.8.1 ID=prot_P-littoralis_Contig1138.8.1|Name=mRNA_P-littoralis_Contig1138.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp
MTFSDCSAFKGAALTTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADA
DQERFERLRYVEIKHGRIAMLAIAGHLTAQNTRLPGMLSNSAGLSFADMP
NGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASS
WDAMSEETQESKRAIELNNGRAAQMGILAMMVHEELSNQPYIINDLVGAS
YSFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln