mRNA_P-littoralis_Contig1136.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1136.4.1
Unique NamemRNA_P-littoralis_Contig1136.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 580 bits (1496), Expect = 2.400e-201
Identity = 288/459 (62.75%), Postives = 315/459 (68.63%), Query Frame = 3
Query:  204 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            MFE  T MW AY+M   YTM  L  DD  T +ARRDVTNFFSPQDCINFLRFTQPQ+                                                                                                             MLMLDLLLIPAFIRTDCGF VSGREA CV+LYRLAFPCRLKD RLVFGLSESCI E+FNWMLHFL+FKWGWLLSLDVERL P+LVEF+EAIYN+  PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+KFQGV+TPDG+FVD+WGPV+GTRHD+YLLAQSGLMQK+ATH NSPSGHPYCLYGDPAYGLS+HL  PFS +++GPLTP+MADFN+RMSHCRV VEWGFKEMT KW FV+MKPQQK+LLSPVG QY VATLLSN HSCLNGGNQISQ+F V PP+L+EYLKV
Sbjct:    1 MFEAYTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQI-------------------------------------------------------------------------------------------------------------MLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.590e-191
Identity = 275/440 (62.50%), Postives = 305/440 (69.32%), Query Frame = 3
Query:  261 MTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            M RL +DDTPTS+AR D T FFSPQDC+NFLRFTQ QV                                                                                                             MLMLDLLLIPAFIRTDC FVVSGREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FNWMLHFLDF+WG+LLSLDV RL P L+EF+EAI+NSG PLTHCWGFIDGTVRGIARPK +QR++YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++   NSP+GHPYCLYGDPAYGLSNHL+ PFS ++ GPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFV+MKPQQKFLLSPV  QYRVATLLSNWHSC+NGGN+ISQYFGV PP+ EEY+ V
Sbjct:    1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQV-------------------------------------------------------------------------------------------------------------MLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 534 bits (1376), Expect = 4.270e-182
Identity = 271/491 (55.19%), Postives = 316/491 (64.36%), Query Frame = 3
Query:  108 PLPSNHATMTRLHIRARNARKKRALVLLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            P  S+H   + L IR R ARKKRAL+ +Q +  + + T MWFA H    YT+ RLA+DD PT  ARR V NFFSPQDC+ F+RFT+ Q+                                                                                                             +LML+LL++PA IRT+CGFVV GREA CV+LYRLAFPC LKD RL FGLSESCICE+FNWMLHF+DFKWG+LLSLDV+RLVPKL  F+EA+YN G PLTHCW FIDGTVRGIARP R +R +YNG+KRKHA+KFQGVVTPDG+FVDL+   +GT HD YLLA+S L++K+ TH NSPSGHPYC+YGDPAYG ++H+  PFS + NGPLTP M  FNK MS CRVTVEWGFKEMT KWAFV+MK QQKFLLSPV  QY+VATLLSN+HSCLNGGNQISQYFGV PP+LEEYLKV
Sbjct:   40 PRASHHVPPS-LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQI-------------------------------------------------------------------------------------------------------------VLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 2.060e-179
Identity = 275/455 (60.44%), Postives = 299/455 (65.71%), Query Frame = 3
Query:  219 THMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKL-VEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            T+MW AY+M   YTM  L  DD  TSLARRD  NFFSPQDCINFLRFTQPQ                LL                                                                                               LDLLLIPAFIRTDCGF+VSGREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FN MLHFLDFKWGWLLS+DVERL P+L VEF+EAIYN+G PLTHCWGFID T+RGIAR     R+        HA+KFQGVVTPDG+FVDLWG V+GTRHD+YLLAQSGLMQK+A HFNSPSG PYCLYGDPAYGLS+HL+ PFS  + GPLTPEMADFN+RMSHCRVTVEWGFKEMT KWAFV+MK QQK+LLSPVG QYRVATLLSN HSCLNGGNQISQYF + PP+LEEYLKV
Sbjct:   25 TYMWMAYNMAFIYTMASLITDDVATSLARRDAANFFSPQDCINFLRFTQPQTT--------------LLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------LDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARV----RLADTHQLSIHAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 496 bits (1278), Expect = 2.540e-163
Identity = 232/296 (78.38%), Postives = 260/296 (87.84%), Query Frame = 3
Query:  693 LQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            LQI +ML+LLLIPAFIRT CGFVVSGREA CV+LYR+AFPCRLKD  LVFG+SES ICE+F WMLHFLDFKWG+LLSL VE +  +L+EF+EA+YN+G PL  CWGFIDGTVRGIARPKR+QR++YN HK KHA KFQGVVTPDG+F DLWGPV+GTRHDNY+LAQSGLMQK+A   NSPSG PY LYGDPAYGLSNHL+ PFS ++ GPLTPE+ADFNKR+S CRVTVEWGFKE+   WAFVNMK QQK LLSPV +QYRVATLLSNWHSCLNGGN+ISQYFGV PPS EEYL V
Sbjct:  403 LQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAM-LNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 1.270e-161
Identity = 253/466 (54.29%), Postives = 296/466 (63.52%), Query Frame = 3
Query:  186 LLQCRNMFEIATHMWFAYHMGAAY-TMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            +L+CRN+FE+ T +WF Y++   Y  M RL +DDTPTS+ARRDVT FFSPQDC++FLRF Q QV                         Y     V++     Y+     +D T + SI RR      S   C                                                  +F+R    F  S                       VFGLSESCICE+FNWMLHFLDF+WG+LLSLDV RL   L+EF+EAI+NS   LTHCWGFIDGTVRGIARPK +QRM+YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++   NSP+GHPYCLYGDPAYGLSN+L+ PFS ++ GP TPEMADFNKRMSHCRVTVEWGFKEMTGKW  VNMKPQQKF LSP+  QYRVATLLSNWHSC+NGGN+ISQYFGV P + EEYL V
Sbjct:    1 MLRCRNLFEVYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQVI------------------------YTDIWFVYNIAFIYYAMARLELDDTPT-SIARRDVTAFFSPQDCV-------------------------------------------------SFLR----FTQSQHPX-------------------VFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 8.700e-158
Identity = 219/295 (74.24%), Postives = 250/295 (84.75%), Query Frame = 3
Query:  696 QIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1580
            QI+LML+LL++PA IRT+CG VV GREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FNWMLH +D K  +LLSLDV+RLVPKL  F+EA+YN G PLTHCW FIDGTVRGIARP R QR +Y+G+KRKHA+KFQGVVTPDG+  DL+   +GTRHD YLLAQS L++K+ TH NSPSGHPYCL+GDPAYG ++H+  PFS + NG L+  M +FNK MS  RVTVEWGFKEMT KWAFV MK QQKFLLSPV  QY VATLLSN+HSCLNGGNQISQYFGV PP+LEEYLKV
Sbjct:   20 QIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVGTRHDGYLLAQSALLEKLQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 314          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 2.440e-153
Identity = 229/400 (57.25%), Postives = 259/400 (64.75%), Query Frame = 3
Query:  186 LLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEW 1385
            +L+CRN+FE+ T +WF Y +   Y M  L +DDTPTS+ARRDVT FFSPQDC+NFLRFTQ QV                                                                                                             MLMLDLLLIPAFIRTDCGFVVSGREA CV+LYRLAFPCRLKD RLVFG+SESCICE FNWMLHFLDF+WG+LLSLDV RL P L+EF+EAI+NSG PLTHCWGFIDGTVRGIARPK +QR+ YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRH +++LAQSGLM+K++   NSP+ HPYCL GDPAYGLSNHL+ PFS ++ GPLTPEMADFNKRMSHCRVTVEW
Sbjct:    1 MLRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQV-------------------------------------------------------------------------------------------------------------MLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSV-LNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: A0A6H5K0J0_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J0_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 1.040e-136
Identity = 199/293 (67.92%), Postives = 229/293 (78.16%), Query Frame = 3
Query:  693 LQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGI--ARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLE 1565
            +++MLMLDLLLIPAFIRTDCGFV                     D RLVFG+SESCICE+FNWMLHFLDF+WG+LLSLDV RL P L+EF+E +                TV  +  A PK +QR++YNGHKRKHAMKFQG++TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++   NSP+GHPYCLYGDPAYGL NHL+ PFS ++ GP TPEMADFNKR SHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPV  QYRVATLLSNWHSC+NGGN+I QYFGV P + E
Sbjct:    1 MRVMLMLDLLLIPAFIRTDCGFV---------------------DMRLVFGMSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEXL----------------TVGDLSMAPPKYWQRLFYNGHKRKHAMKFQGIITPDGLFVDLWGPVAGTRHDSFMLAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLRNHLVCPFSASSVGPFTPEMADFNKRTSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEIWQYFGVVPSTFE 255          
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Match: D7G148_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G148_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 2.800e-134
Identity = 205/357 (57.42%), Postives = 225/357 (63.03%), Query Frame = 3
Query:  204 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQVRL*YECG*KCWQP*ILLLS*QKR*EYGRTTAVHDNR*W*YSRRTTAVDYTSSGSIPRRAAVHSSSTAVCAKW*QQYGIGSMKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYG 1274
            MFE  T +W AY+M   +TM  L  DD  T +ARRDVTNFFSPQDC+NFLR TQPQ+                                                                                                             MLMLDLLLIPAFIRTDCGFVVSGREA CV+LYRLAFPCRLKD RLVFGLSESCIC++FNWMLHFL+FKWGWLLSLDVERL P+LVEF+EAIYN+  PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+KFQGV+TPDG+FVD+WGPV+GTRHD+YLLAQSGLMQK+ATHFNSPSGHPYCLYGD AYG
Sbjct:    1 MFEAYTDIWMAYNMAFIHTMASLVADDVATRVARRDVTNFFSPQDCVNFLRCTQPQI-------------------------------------------------------------------------------------------------------------MLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICQTFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHFNSPSGHPYCLYGDLAYG 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1136.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL85_ECTSI2.400e-20162.75DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE1.590e-19162.50DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE4.270e-18255.19DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KH29_9PHAE2.060e-17960.44DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KLS3_9PHAE2.540e-16378.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ08_9PHAE1.270e-16154.29DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L370_9PHAE8.700e-15874.24DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE2.440e-15357.25DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K0J0_9PHAE1.040e-13667.92DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
D7G148_ECTSI2.800e-13457.42DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1136contigP-littoralis_Contig1136:17403..19912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G105
PFAMsDDE_Tnp_4
Model size2198
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons2
Evalue8.1e-195
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size969
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789461.359665-UTR-P-littoralis_Contig1136:17402..180171680789461.359665-UTR-P-littoralis_Contig1136:17402..18017Pylaiella littoralis U1_48UTRP-littoralis_Contig1136 17403..18017 -
1680789461.392284-UTR-P-littoralis_Contig1136:19298..199121680789461.392284-UTR-P-littoralis_Contig1136:19298..19912Pylaiella littoralis U1_48UTRP-littoralis_Contig1136 19299..19912 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789461.372198-CDS-P-littoralis_Contig1136:18017..185581680789461.372198-CDS-P-littoralis_Contig1136:18017..18558Pylaiella littoralis U1_48CDSP-littoralis_Contig1136 18018..18558 -
1680789461.3806787-CDS-P-littoralis_Contig1136:18870..192981680789461.3806787-CDS-P-littoralis_Contig1136:18870..19298Pylaiella littoralis U1_48CDSP-littoralis_Contig1136 18871..19298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1136.4.1prot_P-littoralis_Contig1136.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1136 18018..19298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1136.4.1

>prot_P-littoralis_Contig1136.4.1 ID=prot_P-littoralis_Contig1136.4.1|Name=mRNA_P-littoralis_Contig1136.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
MKSLGLISCLTCSSCRLPMIVLISRCLQIMLMLDLLLIPAFIRTDCGFVV
SGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGW
LLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRM
YYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVA
THFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSH
CRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLN
GGNQISQYFGVAPPSLEEYLKV*
back to top

mRNA from alignment at P-littoralis_Contig1136:17403..19912-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1136.4.1 ID=mRNA_P-littoralis_Contig1136.4.1|Name=mRNA_P-littoralis_Contig1136.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2510bp|location=Sequence derived from alignment at P-littoralis_Contig1136:17403..19912- (Pylaiella littoralis U1_48)
AGGCTGCCTTCCTGCCTTTCTCTTGGACCTGGGACGGGCGCACAACACTA GTGTCTGCCGTCGAGGAGGCTCGGGTGTGTGCAGTGTCTCACTGGAGGAG GATAAATCCTCTCCCTTCCAATCACGCTACCATGACCCGCTTACATATTC GTGCGAGGAACGCGCGCAAAAAGCGAGCGCTAGTGTTGCTGCAGTGCCGG AATATGTTCGAGATCGCCACACACATGTGGTTCGCCTATCACATGGGCGC CGCATACACCATGACGCGCCTGGCCATGGACGACACGCCGACGAGTTTGG CACGCAGGGATGTTACCAACTTCTTCAGTCCTCAAGACTGCATCAATTTC CTTCGATTCACGCAGCCGCAGGTGCGTCTATGATACGAGTGTGGTTAGAA GTGTTGGCAGCCATAAATACTGCTGCTGTCGTAGCAGAAGCGATAAGAGT ACGGAAGAACTACAGCAGTACACGACAACCGGTAGTGGTAGTACAGCAGA AGAACTACAGCAGTAGACTACACGTCAAGCGGTAGTATACCTCGTAGAGC AGCAGTACACAGCAGTAGTACAGCAGTATGCGCCAAGTGGTAGCAGCAGT ACGGTATCGGTTCGATGAAATCGCTGGGACTAATCTCGTGCTTGACCTGC TCCTCATGCCGGCTTCCCATGATCGTTTTGATTTCTCGCTGTTTGCAGAT TATGCTCATGCTTGACCTCCTCTTGATCCCGGCGTTCATTCGCACGGACT GTGGGTTCGTCGTAAGCGGCCGCGAGGCTTTCTGCGTGATGTTGTACCGG CTAGCGTTTCCATGCCGACTGAAAGACACGCGTCTCGTTTTTGGTCTAAG CGAATCGTGCATCTGCGAGAGCTTCAACTGGATGCTGCACTTCCTCGACT TCAAATGGGGCTGGCTTCTCTCCCTGGATGTGGAGCGCTTGGTACCGAAA CTTGTCGAGTTCTCCGAAGCCATCTACAACTCTGGTTCTCCCCTGACACA CTGCTGGGGGTTCATCGATGGCACCGTTCGTGGTATCGCAAGGTAAAGTA CTTTCGGGGGTGGGTAGACGCTGCAACCGGTGTCACACAGGGGTATTCAA CACAGAGTTCTTCATATATGCCCTCCCACTGCGGTGCTTGCTTTCTTTTC ATCGCGAAACAGGGTCCAGGTAACCCTTTGCCTCTTCGATAACCTAATCG AATTCTTGAGTTAACTATTTTCCACCTTCTTCACGCATTATGTGACTGCA CCCAACATTTGTACAGAATTACTCGGTTGTTCAACCGAACCACCGAGGCG ATCCCAGGACATACACTTGTATTCTGCCTCTCTTTTTTTGTTTTCATATG GCAGGCCCAAACGCTTCCAGAGGATGTACTACAACGGACATAAGAGGAAG CACGCCATGAAATTCCAAGGCGTGGTGACCCCAGATGGAATTTTCGTCGA TTTGTGGGGCCCTGTAATGGGCACTCGTCACGATAACTACTTGTTAGCGC AGTCCGGACTCATGCAGAAGGTAGCCACACACTTCAACAGCCCCTCTGGG CATCCATACTGTCTTTACGGGGATCCCGCGTACGGTTTGTCTAACCATTT GCTTTCCCCCTTTAGTACAACAACTAACGGGCCTCTGACACCCGAGATGG CCGATTTCAACAAACGAATGAGCCACTGCAGAGTGACGGTAGAATGGGGG TTTAAAGAGATGACTGGAAAATGGGCCTTTGTGAACATGAAGCCTCAGCA GAAGTTCCTCTTGAGTCCGGTCGGGATTCAGTACAGGGTGGCTACCCTTT TGTCGAACTGGCACTCGTGTCTGAACGGGGGAAATCAGATTTCGCAGTAT TTTGGTGTAGCGCCGCCTTCCCTCGAGGAGTACCTAAAGGTGTAAGGTCC TCAGGACGCCAAGGTTCACTTGGAGGTAGATAGAGCGTGGGTCGTATGTA TGTTGCCCTTGCGGTTAGCCCTGAGGATGTTCCGCAAGTATTTACTGTTG TCGGATGTAAGCACGCAGGAGTAATAGCCGAGAACCGCATTTTTCATTGT TGTTACTGTTGTTGGGACCACGATGGTAGGATTCCCGTACCGGTCAACCA CAACACAAATAATTCATCAACGCAAACCCGCCGTATACTATGCATTTCTA ACCCCGACCACAACACAAAACTTGGACCCATGTTGAGAGACTCCGGGGAA GTACACAGCATTTAGGTACTTGGGCGCAATGCATGCTACCTGCACTTCTT ATTCGTACGAGGAATGATTACACCGGTATCCAAACAAGGAAGACAAGGAA ATATTACCCCCCGGCCTTCGTGCACCCTCATCAGTTTTCGTTCTGGGAGT TTCCCAAGACCACACCAGCAAAAAAGGAAATACGACCGGGCATCAAAACA CAATACCCGGGATCAAGAGAAGGAAAAATATCAACTGACTGTACTTCTCG GTGATCATGTTCCCTCAGCAGTTTTGATGCTGGGGGCTTGCCAAGACCAC AAAAAAAAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1136:17403..19912-

>mRNA_P-littoralis_Contig1136.4.1 ID=mRNA_P-littoralis_Contig1136.4.1|Name=mRNA_P-littoralis_Contig1136.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=969bp|location=Sequence derived from alignment at P-littoralis_Contig1136:17403..19912- (Pylaiella littoralis U1_48)
ATGAAATCGCTGGGACTAATCTCGTGCTTGACCTGCTCCTCATGCCGGCT
TCCCATGATCGTTTTGATTTCTCGCTGTTTGCAGATTATGCTCATGCTTG
ACCTCCTCTTGATCCCGGCGTTCATTCGCACGGACTGTGGGTTCGTCGTA
AGCGGCCGCGAGGCTTTCTGCGTGATGTTGTACCGGCTAGCGTTTCCATG
CCGACTGAAAGACACGCGTCTCGTTTTTGGTCTAAGCGAATCGTGCATCT
GCGAGAGCTTCAACTGGATGCTGCACTTCCTCGACTTCAAATGGGGCTGG
CTTCTCTCCCTGGATGTGGAGCGCTTGGTACCGAAACTTGTCGAGTTCTC
CGAAGCCATCTACAACTCTGGTTCTCCCCTGACACACTGCTGGGGGTTCA
TCGATGGCACCGTTCGTGGTATCGCAAGGCCCAAACGCTTCCAGAGGATG
TACTACAACGGACATAAGAGGAAGCACGCCATGAAATTCCAAGGCGTGGT
GACCCCAGATGGAATTTTCGTCGATTTGTGGGGCCCTGTAATGGGCACTC
GTCACGATAACTACTTGTTAGCGCAGTCCGGACTCATGCAGAAGGTAGCC
ACACACTTCAACAGCCCCTCTGGGCATCCATACTGTCTTTACGGGGATCC
CGCGTACGGTTTGTCTAACCATTTGCTTTCCCCCTTTAGTACAACAACTA
ACGGGCCTCTGACACCCGAGATGGCCGATTTCAACAAACGAATGAGCCAC
TGCAGAGTGACGGTAGAATGGGGGTTTAAAGAGATGACTGGAAAATGGGC
CTTTGTGAACATGAAGCCTCAGCAGAAGTTCCTCTTGAGTCCGGTCGGGA
TTCAGTACAGGGTGGCTACCCTTTTGTCGAACTGGCACTCGTGTCTGAAC
GGGGGAAATCAGATTTCGCAGTATTTTGGTGTAGCGCCGCCTTCCCTCGA
GGAGTACCTAAAGGTGTAA
back to top