mRNA_P-littoralis_Contig1135.8.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1135.8.2
Unique NamemRNA_P-littoralis_Contig1135.8.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 451 bits (1161), Expect = 5.410e-154
Identity = 236/368 (64.13%), Postives = 269/368 (73.10%), Query Frame = 1
Query:    4 NWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATG--------------------------GKEKERFTLCLAVTADGKKIPVRIILKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFG-------------LWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWC 897
            +WYQRFRKR++FSIRRRTSVG +LPKGHEGMA                               + G+DL+S QLE V +E+F++LGNM+QTPVQ+EMP ETTL++ G KDARIATG                          GKEKERFTLCLAV+ADG K+P+RII KGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGM FG             LWIK+SW++RPNNGSV++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPG LTPLLQPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKICGL+LALDGSEDHAWC
Sbjct:  120 SWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWC 487          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 9.140e-148
Identity = 226/343 (65.89%), Postives = 253/343 (73.76%), Query Frame = 1
Query:    1 NNWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFGL-------------WIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWC 897
            N+WYQRFRKR+ FSIRRRTSVGQKLPKG EGMA                               + G+DLTS QL SV  EVFEELGNM+QTPVQHE+P ETTL++ G KDARI+TGGKEKERFTL LAV ADGKK+  RII KGTPF P TV+G G++T PRKNS+A EI P NR K GHP  GM FG+             WI  SW++RPNNGS+++QR CILVLDDFKCHKD+ FIA LKRD NTIVIFIPGRLTPLLQPLDRMLNKQMKRLLR  YT +SASA  D ++GKL PP RG VSTWCK+AW + TPE VKTCF ICGL+LALDGSEDHAWC
Sbjct:   32 NSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWC 374          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 2.750e-145
Identity = 228/332 (68.67%), Postives = 258/332 (77.71%), Query Frame = 1
Query:    4 NWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFG-------------LWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLA 867
            +WYQRF KR++FSIRRRTSVGQKLPKGHEGMA                               + G+DL+S QLE V +E+FEELGNM+QTPVQHEMP ETTL+  G KDARIATGGKEKERFTLCLAV+ADGKK+P+RII KGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGM FG             LWIK+SW++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPG L PL QPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE+VKTCFKICGL+LA
Sbjct:  187 SWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 2.480e-141
Identity = 224/372 (60.22%), Postives = 253/372 (68.01%), Query Frame = 1
Query:    1 NNWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFGL-------------WIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMV-----------------------------KTCFKICGLSLALDGSEDHAWC 897
            N+WYQRFRKR+ FSIRRRTSVGQKLPKG+EGMA                               + G+DLT  QL SV  EVF+ELGNM+QTPVQHEMP ETTL++ G KDARI+TGGKEKERFTL LAV ADGKK+  RII KGTPFIP  V+G G++T PRKNS+A EI P NR K  HP  GM FG+             WI  SW++RPNNGS+++QR CILVLDDFKCHKD+ +IA LKRD NTIVI IPG LTPLLQPLDRMLNKQMKRLLRG YT +SASA  D ++GKL PP RG VSTWCK+AW +ITPE V                             KTCFKICGL+LALDGSEDHAWC
Sbjct:   32 NSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWC 403          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 3.150e-139
Identity = 214/331 (64.65%), Postives = 243/331 (73.41%), Query Frame = 1
Query:   37 FSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFG-------------LWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWC 897
            F+IRR TSVGQKLPKGHEGMA                               + G+DL+S QLE V +E+FEELGNM+QTPVQHE P E   +    +  R       +ERFTLCLAV+ADGKK+P+RII KGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGM FG             LWIK+SW++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPG LTPLLQPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE  KTCFKICGL+LALDGSEDHAWC
Sbjct:  168 FNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWC 494          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 7.720e-136
Identity = 218/342 (63.74%), Postives = 248/342 (72.51%), Query Frame = 1
Query:    1 NNWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGG-KEKERFTLCLAVTADGKKIPVRIILKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFGL-------------WIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHA 891
            N+WYQRFRKR+ FSIRRRTSVGQKLPKG+EGMA                               + G+DL S QL SV  EVFEE+GNM+Q PVQHEMP ETTL + G KDARI+TGG  EKERFTL LAVTADGKK+  RII +GTPFIP TV+G G++T+PRKN +A E+ P NR K GHP  GM FG+             WI  SW++RPNNGS+++QR  ILVLDDFKCH D+ FIA LKRD NTIVIFIPG LTPLLQPLDRMLNKQMKRLLRG YT +S SA  D ++GKL PP RG VSTWCK+AW +ITPE VKTC KICGL+LALDGSEDHA
Sbjct:  226 NSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.230e-135
Identity = 220/352 (62.50%), Postives = 247/352 (70.17%), Query Frame = 1
Query:    1 NNWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFGL-------------WIKESWRV--------RPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWCT 900
            N+WYQRFRKR+ FSIRRR SVGQKLPKG+EGMA                               + G+DLTS Q  SV  EVFEELGNM+QTPVQHEMP ETTL+  G KDARI+TGGKEKERFTL LAV ADGK +   II KGTPFIP TV+G G++T PRKNS+A E+ P NR K GHP  GM FG+             WI  SW++        RPNNGS+++QR CILVLDDFKCHKD+ FIA L RD NTIVIFIPG LTPLLQPLDRMLNKQMKRLLRG YT +SA A  D ++GKL PP RG VSTWCK+AW  +T E V TCFKICGL+LALDGSEDHA CT
Sbjct:  186 NSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA-CT 536          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 6.210e-135
Identity = 214/342 (62.57%), Postives = 241/342 (70.47%), Query Frame = 1
Query:    4 NWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFG-------------LWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWC 897
            +WYQRFRKR++F+IRRRTSVGQKLPKGHEGMA                               + G+DL+S QLE V +E+FEELGNM+QTPVQHE  A                GGKEKERFTLCLAV+ADGKK+P+RII KGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+ GM FG             LWIK SW++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPG LTPLLQ LDRMLNKQMKRLL              PKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKICGL+LALDGSEDHAWC
Sbjct:  174 SWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDA----------------GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWC 499          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 3.500e-130
Identity = 194/279 (69.53%), Postives = 222/279 (79.57%), Query Frame = 1
Query:  103 VDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKFGHPMGGMFFGL-------------WIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWC 897
            + G+DLTS QL SV  EVFE+LGNM+QTPVQHEMP ETTL++ G KDAR++TGG+EKERFTL LAVTADGKK+ +RII  GTPFIP TV+G G++T PRKNS+A E+ P NR K GHP  GM FG+             W   SW++RPNNGS+++QR CILVLDDFKCHKD+ FIA LKRD NTIVIFIPG LTPLLQPLDRMLNKQ KRLLR  YT +SASA  D ++GKL PP RG VSTWCK AW +ITPE VKTCFKICGL+LALDGSEDHAWC
Sbjct:   30 IKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWC 307          
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 1.320e-128
Identity = 208/343 (60.64%), Postives = 237/343 (69.10%), Query Frame = 1
Query:    4 NWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMA------------------------------SVDGKDLTSGQLESVAEEVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAVTADGKKIPVRIILKGTPFIPTVTGV-GRATQPRKNSIAAEILPQNRRKFGHPMGGMFFG-------------LWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWCT 900
            NWY RFR+RH  SIRRRTSVGQKLP G+EG+A                               + GKDL+  QLESVA EVFEELGNM+QTPVQ EMP ETTL++ G KDARI+TGGKEKERFTLCLAV ADG K+P+RII KG PFIP  T   G+ TQPRK SIAAE+LP N+  FG+P+ GM FG             LW+ ESW  RPN+GSV+KQR  ILVLDDF+              TNT VI IPG LTPLLQPLDRML+K+MKRL+R  YT++ ASA  DPKTGKL PPGRG VSTWCK++WA IT E VK CFK+CGL+LALDGSED AWCT
Sbjct:  206 NWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCT 534          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1135.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE45_9PHAE5.410e-15464.13DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE9.140e-14865.89DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE2.750e-14568.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE2.480e-14160.22DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE3.150e-13964.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE7.720e-13663.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.230e-13562.50DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE6.210e-13562.57DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE3.500e-13069.53DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.320e-12860.64DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1135contigP-littoralis_Contig1135:35177..36548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size900
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.47e-103
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size900
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789461.1551998-CDS-P-littoralis_Contig1135:35176..352741680789461.1551998-CDS-P-littoralis_Contig1135:35176..35274Pylaiella littoralis U1_48CDSP-littoralis_Contig1135 35177..35274 +
1680789461.1681383-CDS-P-littoralis_Contig1135:35364..355281680789461.1681383-CDS-P-littoralis_Contig1135:35364..35528Pylaiella littoralis U1_48CDSP-littoralis_Contig1135 35365..35528 +
1680789461.177714-CDS-P-littoralis_Contig1135:35871..360831680789461.177714-CDS-P-littoralis_Contig1135:35871..36083Pylaiella littoralis U1_48CDSP-littoralis_Contig1135 35872..36083 +
1680789461.1886861-CDS-P-littoralis_Contig1135:36122..365481680789461.1886861-CDS-P-littoralis_Contig1135:36122..36548Pylaiella littoralis U1_48CDSP-littoralis_Contig1135 36123..36548 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1135.8.2prot_P-littoralis_Contig1135.8.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1135 35177..36548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1135.8.2

>prot_P-littoralis_Contig1135.8.2 ID=prot_P-littoralis_Contig1135.8.2|Name=mRNA_P-littoralis_Contig1135.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
NNWYQRFRKRHRFSIRRRTSVGQKLPKGHEGMASVDGKDLTSGQLESVAE
EVFEELGNMNQTPVQHEMPAETTLQQRGDKDARIATGGKEKERFTLCLAV
TADGKKIPVRIILKGTPFIPTVTGVGRATQPRKNSIAAEILPQNRRKFGH
PMGGMFFGLWIKESWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLK
RDTNTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKT
GKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICGLSLALDGSEDHAWCT
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mRNA from alignment at P-littoralis_Contig1135:35177..36548+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1135.8.2 ID=mRNA_P-littoralis_Contig1135.8.2|Name=mRNA_P-littoralis_Contig1135.8.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1372bp|location=Sequence derived from alignment at P-littoralis_Contig1135:35177..36548+ (Pylaiella littoralis U1_48)
AACAACTGGTACCAACGTTTTCGCAAGCGGCACAGGTTCAGCATCCGCCG ACGTACCAGCGTGGGCCAAAAGCTACCGAAGGGACACGAGGGCATGGCGT AGGCGACGCTGATGAAGCTGCGCGAGGCTCTCGTGAAGCGCGCTTGGGAG ATCTACGCTCGGCGCCACCCCCCTGCACCTGGTGAGAGCTCCGTCGACGG GAAGGACCTGACTTCCGGGCAGCTGGAGTCGGTCGCCGAAGAGGTGTTCG AAGAACTCGGCAACATGAACCAGACGCCAGTCCAGCACGAGATGCCGGCG GAGACGACGCTGCAGCAGCGCGGTGATAAGGACGCTCGAATTGCCACAGG AGGTGAGAGTGAACTGCGGTGCTGCGAGTTGTGTACGAGGAGTACCTACA TGTTTCCATGTTCCTATCAAGTATTGGCGTCTTCGTTGTTGCAGGTTTCT TTTTGGTCTTGGTGGTTTGTACTCCGTATTTTTCAGTTCTGGGAAATCCG TACGTCTACAATTTGCAGCCATGTCAACCCCTCTTTCCGATGCAGTTTTT GATCGTGGTGTTTTTTCCTCTCTCTTGGAAATCCGTACGTGTACCGTCTG TAGCCATCCATGTCAAGCGCCATCTGCTGGTCAGCATTGTTCAAACCCCT CCTCCTACGCGCCTACCCCCTACCGTCGTGTGCACCTCTCCCCAGGAAAG GAGAAGGAACGCTTCACGCTTTGCCTTGCTGTCACGGCGGACGGGAAGAA GATTCCGGTGCGCATCATCTTAAAGGGGACGCCGTTCATCCCGACGGTCA CCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGAATTCCATCGCGGCTGAG ATCCTTCCCCAGAACCGTCGCAAGTTCGGGCACCCCATGGGAGGCATGTT TTTCGGCGTGCAGGAGAAAAGCTGATGCGACCTGCGGGAGTGCAAGCTCT GGATCAAGGAGAGCTGGAGGGTCCGCCCGAACAACGGCAGCGTCCTCAAG CAGCGGGCATGCATCTTGGTGCTGGACGACTTCAAGTGCCACAAGGACGA CGAGTTCATCGCCTTCCTCAAGAGGGACACCAACACCATCGTCATCTTCA TCCCAGGCCGGTTGACTCCTCTCCTCCAACCGCTGGATCGCATGCTCAAC AAGCAGATGAAGCGGCTGCTGCGGGGCATGTACACGAAGCACTCGGCGTC GGCGGCCAGAGACCCCAAGACGGGCAAGCTGACACCGCCTGGGCGTGGTG CCGTCTCGACGTGGTGCAAGGACGCGTGGGCAACCATCACGCCGGAGATG GTCAAGACTTGTTTCAAGATCTGCGGCCTCTCGCTTGCGCTCGACGGCAG CGAAGACCACGCCTGGTGCACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1135:35177..36548+

>mRNA_P-littoralis_Contig1135.8.2 ID=mRNA_P-littoralis_Contig1135.8.2|Name=mRNA_P-littoralis_Contig1135.8.2|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig1135:35177..36548+ (Pylaiella littoralis U1_48)
AACAACTGGTACCAACGTTTTCGCAAGCGGCACAGGTTCAGCATCCGCCG
ACGTACCAGCGTGGGCCAAAAGCTACCGAAGGGACACGAGGGCATGGCCT
CCGTCGACGGGAAGGACCTGACTTCCGGGCAGCTGGAGTCGGTCGCCGAA
GAGGTGTTCGAAGAACTCGGCAACATGAACCAGACGCCAGTCCAGCACGA
GATGCCGGCGGAGACGACGCTGCAGCAGCGCGGTGATAAGGACGCTCGAA
TTGCCACAGGAGGAAAGGAGAAGGAACGCTTCACGCTTTGCCTTGCTGTC
ACGGCGGACGGGAAGAAGATTCCGGTGCGCATCATCTTAAAGGGGACGCC
GTTCATCCCGACGGTCACCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGA
ATTCCATCGCGGCTGAGATCCTTCCCCAGAACCGTCGCAAGTTCGGGCAC
CCCATGGGAGGCATGTTTTTCGGCCTCTGGATCAAGGAGAGCTGGAGGGT
CCGCCCGAACAACGGCAGCGTCCTCAAGCAGCGGGCATGCATCTTGGTGC
TGGACGACTTCAAGTGCCACAAGGACGACGAGTTCATCGCCTTCCTCAAG
AGGGACACCAACACCATCGTCATCTTCATCCCAGGCCGGTTGACTCCTCT
CCTCCAACCGCTGGATCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGC
GGGGCATGTACACGAAGCACTCGGCGTCGGCGGCCAGAGACCCCAAGACG
GGCAAGCTGACACCGCCTGGGCGTGGTGCCGTCTCGACGTGGTGCAAGGA
CGCGTGGGCAACCATCACGCCGGAGATGGTCAAGACTTGTTTCAAGATCT
GCGGCCTCTCGCTTGCGCTCGACGGCAGCGAAGACCACGCCTGGTGCACG
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